<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/kleborate">Debian Med / kleborate</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/e2ae7b7473e1360e5a0d5efa2b60c227a4cdf84a">e2ae7b74</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T06:43:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0</pre>
</li>
</ul>
<h4>23 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#78dd066ff5587dce0473ff0d642f61972c4f2d51">
kleborate-runner.py
</a>
</li>
<li class="file-stats">
<a href="#2238add58e2646665c54da2f0a612510fcc0def0">
kleborate/kleborate.py
→
kleborate/__main__.py
</a>
</li>
<li class="file-stats">
<a href="#1980678d5be87999cc65f529cae0b9d149f0c08c">
kleborate/blastn.py
</a>
</li>
<li class="file-stats">
<a href="#7c9d74be8a1517dbdbc9c538810c9334bb843517">
kleborate/contig_stats.py
</a>
</li>
<li class="file-stats">
<a href="#3f62198ed5da374a4ef510aa7278cbe9c08cfddc">
<span class="new-file">
+
kleborate/data/CARD_AMR_clustered.csv
</span>
</a>
</li>
<li class="file-stats">
<a href="#866530f4c711ffef1df1bdcf32da021691f328ef">
<span class="new-file">
+
kleborate/data/CARD_v3.0.8.fasta
</span>
</a>
</li>
<li class="file-stats">
<a href="#94f4a9b71f2d83e469e81c90407b9942efdfda88">
kleborate/ICEKp_references/ICEKp1.embl
→
kleborate/data/ICEKp_references/ICEKp1.embl
</a>
</li>
<li class="file-stats">
<a href="#77c8b7a05748d808d0b40b06d0d9075b78b732fb">
kleborate/ICEKp_references/ICEKp10.embl
→
kleborate/data/ICEKp_references/ICEKp10.embl
</a>
</li>
<li class="file-stats">
<a href="#8499a24d917177fe2b2da8d72667e19f94147574">
kleborate/ICEKp_references/ICEKp11.embl
→
kleborate/data/ICEKp_references/ICEKp11.embl
</a>
</li>
<li class="file-stats">
<a href="#feebb895c025c16cb29d41698043c1840f281ffe">
kleborate/ICEKp_references/ICEKp12.embl
→
kleborate/data/ICEKp_references/ICEKp12.embl
</a>
</li>
<li class="file-stats">
<a href="#4972d835b8321aeb2e69630f0355c2d91fa90d43">
kleborate/ICEKp_references/ICEKp13.embl
→
kleborate/data/ICEKp_references/ICEKp13.embl
</a>
</li>
<li class="file-stats">
<a href="#2e2236ca592a909a8bac9c6a40214b6d4bf4b26f">
kleborate/ICEKp_references/ICEKp14.embl
→
kleborate/data/ICEKp_references/ICEKp14.embl
</a>
</li>
<li class="file-stats">
<a href="#7eccb9600d9deb4e0cd74190812cde2b030aae54">
kleborate/ICEKp_references/ICEKp2.embl
→
kleborate/data/ICEKp_references/ICEKp2.embl
</a>
</li>
<li class="file-stats">
<a href="#14e1292289e470154a8d3ab266a2f04f83f4820e">
kleborate/ICEKp_references/ICEKp3.embl
→
kleborate/data/ICEKp_references/ICEKp3.embl
</a>
</li>
<li class="file-stats">
<a href="#1fe716bd8387b26d578bd1e63e0f6aac8b54f3e2">
kleborate/ICEKp_references/ICEKp4.embl
→
kleborate/data/ICEKp_references/ICEKp4.embl
</a>
</li>
<li class="file-stats">
<a href="#a040d167e75de45bb2b2437d63f1e113849351d3">
kleborate/ICEKp_references/ICEKp5.embl
→
kleborate/data/ICEKp_references/ICEKp5.embl
</a>
</li>
<li class="file-stats">
<a href="#fac6635368f3e34a76263ad163d5680503dfdbb0">
kleborate/ICEKp_references/ICEKp6.embl
→
kleborate/data/ICEKp_references/ICEKp6.embl
</a>
</li>
<li class="file-stats">
<a href="#15604f8ae37c04d9688e7e7eb3b591894c5db163">
kleborate/ICEKp_references/ICEKp7.embl
→
kleborate/data/ICEKp_references/ICEKp7.embl
</a>
</li>
<li class="file-stats">
<a href="#af8cfcb1b8ab7dd4815eafa6a1313103253cc6ec">
kleborate/ICEKp_references/ICEKp8.embl
→
kleborate/data/ICEKp_references/ICEKp8.embl
</a>
</li>
<li class="file-stats">
<a href="#13907f05edf16a6e5a3ff0f3515711ca41491e23">
kleborate/ICEKp_references/ICEKp9.embl
→
kleborate/data/ICEKp_references/ICEKp9.embl
</a>
</li>
<li class="file-stats">
<a href="#723e8a93b7ab31c4c50cdca787f86ca15d243c35">
<span class="new-file">
+
kleborate/data/RmST_profiles.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#ae84f5cbce0ea908815fc4565215a7888cfb62f6">
<span class="new-file">
+
kleborate/data/rmpA2.fasta
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/kleborate/-/commit/e2ae7b7473e1360e5a0d5efa2b60c227a4cdf84a">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/kleborate/-/commit/e2ae7b7473e1360e5a0d5efa2b60c227a4cdf84a"}}</script>
</p>
</div>
</body>
</html>