<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch debian/stretch-backports
at <a href="https://salsa.debian.org/med-team/kleborate">Debian Med / kleborate</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/15f181816c2f1bff70b161c033a5166901d748cc">15f18181</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-29T13:56:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Comment debugging code in postinst
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/533bbc421096110b31fb5ee4ad9958029eccb0e3">533bbc42</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T16:14:12+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Added myself to uploaders.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/b32aa1672229b7c26859ae9db9d90fedcfc9171d">b32aa167</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T17:51:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">improved build reproducibility
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/7cf27a2a8d39441c4f41606fbae8cc1b607da47e">7cf27a2a</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T17:54:09+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">added fix-ftbfs-biopython-1.78.patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/59eeca346c2f9722d99a4a8c437ff51ac1f23d1e">59eeca34</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T18:06:02+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/66cdc707d94c1fbb63f92488c247ba19b73ee49d">66cdc707</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T18:06:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/0b8c329f34f8040c5b1b1b5db4adf1b756e3ff06">0b8c329f</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T18:06:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/30da58f476cf8b54301c7878615e2b64fa4e4828">30da58f4</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2020-09-19T18:08:11+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/95768a376cd9dfa648f92443fad99db104c57057">95768a37</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T06:43:58+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/e2ae7b7473e1360e5a0d5efa2b60c227a4cdf84a">e2ae7b74</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T06:43:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/f2b0aca79b7d4ab780dd088558b6acb511089a3c">f2b0aca7</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T06:45:40+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.0.0'
Update to upstream version '2.0.0'
with Debian dir 895fd20621a30574190595a4d18107924f47eb4d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/66469702698b084b28c6281f63c18592ca0b27bb">66469702</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T08:07:35+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/68dba321c99d20ecacbaa626d7ca7395adf87b57">68dba321</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-15T08:51:55+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/1fbba6c5f7cef6ba4f739c20d32befe275364e7e">1fbba6c5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:01:06+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge branch 'master' into debian/stretch-backports
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/8213982901c14c0008f1a69d7402150be3926fac">82139829</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:01:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Rebuild for stretch-backports-sloppy
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/5c7d50ea1353d72bd27fc2b82135a521019c06e1">5c7d50ea</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:30:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/6dcc9d4f25b16fdb7abd5ca8bcea5e839929c42d">6dcc9d4f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:36:01+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper compat=12 is fine
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/3c472073ffa0082d238ab4f9d6afc08f93e6171e">3c472073</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:45:53+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Re-add encoding patch which persists also in this version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/d99abe75e85d1b113b0b4bb2b0249d6f4991e10f">d99abe75</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T09:55:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix some syntax which is invalid in Python3.5
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/kleborate/-/commit/30cd1f49ee904d9c29a69f61429f3d23f9b29f5f">30cd1f49</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-23T14:01:56+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream issing f-strings which is not available in Python3.5
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#5fc90cb05f08bbee290a4e1201cee25f69ee51fc">
debian/kleborate.postinst
</a>
</li>
<li class="file-stats">
<a href="#c9a6684445428cda76ee2317ace45ade0da488b1">
<span class="new-file">
+
debian/patches/line_endings.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#38e558e7f5b56d79a41b4a34d7976041921e30a4">
<span class="deleted-file">
−
debian/patches/skip_test_failing_in_stretch.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#78dd066ff5587dce0473ff0d642f61972c4f2d51">
kleborate-runner.py
</a>
</li>
<li class="file-stats">
<a href="#2238add58e2646665c54da2f0a612510fcc0def0">
kleborate/kleborate.py
→
kleborate/__main__.py
</a>
</li>
<li class="file-stats">
<a href="#1980678d5be87999cc65f529cae0b9d149f0c08c">
kleborate/blastn.py
</a>
</li>
<li class="file-stats">
<a href="#7c9d74be8a1517dbdbc9c538810c9334bb843517">
kleborate/contig_stats.py
</a>
</li>
<li class="file-stats">
<a href="#3f62198ed5da374a4ef510aa7278cbe9c08cfddc">
<span class="new-file">
+
kleborate/data/CARD_AMR_clustered.csv
</span>
</a>
</li>
<li class="file-stats">
<a href="#866530f4c711ffef1df1bdcf32da021691f328ef">
<span class="new-file">
+
kleborate/data/CARD_v3.0.8.fasta
</span>
</a>
</li>
<li class="file-stats">
<a href="#94f4a9b71f2d83e469e81c90407b9942efdfda88">
kleborate/ICEKp_references/ICEKp1.embl
→
kleborate/data/ICEKp_references/ICEKp1.embl
</a>
</li>
<li class="file-stats">
<a href="#77c8b7a05748d808d0b40b06d0d9075b78b732fb">
kleborate/ICEKp_references/ICEKp10.embl
→
kleborate/data/ICEKp_references/ICEKp10.embl
</a>
</li>
<li class="file-stats">
<a href="#8499a24d917177fe2b2da8d72667e19f94147574">
kleborate/ICEKp_references/ICEKp11.embl
→
kleborate/data/ICEKp_references/ICEKp11.embl
</a>
</li>
<li class="file-stats">
<a href="#feebb895c025c16cb29d41698043c1840f281ffe">
kleborate/ICEKp_references/ICEKp12.embl
→
kleborate/data/ICEKp_references/ICEKp12.embl
</a>
</li>
<li class="file-stats">
<a href="#4972d835b8321aeb2e69630f0355c2d91fa90d43">
kleborate/ICEKp_references/ICEKp13.embl
→
kleborate/data/ICEKp_references/ICEKp13.embl
</a>
</li>
<li class="file-stats">
<a href="#2e2236ca592a909a8bac9c6a40214b6d4bf4b26f">
kleborate/ICEKp_references/ICEKp14.embl
→
kleborate/data/ICEKp_references/ICEKp14.embl
</a>
</li>
<li class="file-stats">
<a href="#7eccb9600d9deb4e0cd74190812cde2b030aae54">
kleborate/ICEKp_references/ICEKp2.embl
→
kleborate/data/ICEKp_references/ICEKp2.embl
</a>
</li>
<li class="file-stats">
<a href="#14e1292289e470154a8d3ab266a2f04f83f4820e">
kleborate/ICEKp_references/ICEKp3.embl
→
kleborate/data/ICEKp_references/ICEKp3.embl
</a>
</li>
<li class="file-stats">
<a href="#1fe716bd8387b26d578bd1e63e0f6aac8b54f3e2">
kleborate/ICEKp_references/ICEKp4.embl
→
kleborate/data/ICEKp_references/ICEKp4.embl
</a>
</li>
<li class="file-stats">
<a href="#a040d167e75de45bb2b2437d63f1e113849351d3">
kleborate/ICEKp_references/ICEKp5.embl
→
kleborate/data/ICEKp_references/ICEKp5.embl
</a>
</li>
<li class="file-stats">
<a href="#fac6635368f3e34a76263ad163d5680503dfdbb0">
kleborate/ICEKp_references/ICEKp6.embl
→
kleborate/data/ICEKp_references/ICEKp6.embl
</a>
</li>
<li class="file-stats">
<a href="#15604f8ae37c04d9688e7e7eb3b591894c5db163">
kleborate/ICEKp_references/ICEKp7.embl
→
kleborate/data/ICEKp_references/ICEKp7.embl
</a>
</li>
<li class="file-stats">
<a href="#af8cfcb1b8ab7dd4815eafa6a1313103253cc6ec">
kleborate/ICEKp_references/ICEKp8.embl
→
kleborate/data/ICEKp_references/ICEKp8.embl
</a>
</li>
<li class="file-stats">
<a href="#13907f05edf16a6e5a3ff0f3515711ca41491e23">
kleborate/ICEKp_references/ICEKp9.embl
→
kleborate/data/ICEKp_references/ICEKp9.embl
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/kleborate/-/compare/cd0c61262be6787ace962af6d257ed2ae502ce96...30cd1f49ee904d9c29a69f61429f3d23f9b29f5f">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>