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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/pangolin">Debian Med / pangolin</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/pangolin/-/commit/3500d4a8783390893050de37f6c1331289bc624c">3500d4a8</a></strong>
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<span>by Andreas Tille</span>
<i>at 2020-11-26T21:13:26+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add ITP bug
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<h4>2 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/pangolin/-/commit/3500d4a8783390893050de37f6c1331289bc624c#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">pangolin (2.0.8-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> * Initial release (Closes: #<span class="idiff left right"><bug></span>)</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Initial release (Closes: #<span class="idiff left right">975920</span>)</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> TODO: python3-lineages (https://github.com/cov-lineages/lineages)</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> -> just try running `pangolin --help` to see the problem</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> Also</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> https://github.com/cov-lineages/pangoLEARN</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> seems to be needed</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Thu, 26 Nov 2020 12:55:36 +0100</span></pre>
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<a href="https://salsa.debian.org/med-team/pangolin/-/commit/3500d4a8783390893050de37f6c1331289bc624c#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,7 +17,8 @@ Package: pangolin</td>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Architecture: all</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Depends: ${python3:Depends},</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> ${misc:Depends},</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> snakemake</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> snakemake,</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> python3-sklearn</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Description: Phylogenetic Assignment of Named Global Outbreak LINeages</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> Pangolin runs a multinomial logistic regression model trained against</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> lineage assignments based on GISAID data.</span>
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