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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8d0d5d63aa64e65f0af3b4a2c0c34309282a9d3b">8d0d5d63</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-11-28T13:45:25+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/8d0d5d63aa64e65f0af3b4a2c0c34309282a9d3b#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Nov 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Nov 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">5</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">7</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> orthanc | 94 | {covid-19,imaging,practice} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 47 | {<span class="idiff left right">oncology,practice,covid-19,his,imaging,laboratory</span>} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">8</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 47 | {<span class="idiff left right">his,oncology,imaging,laboratory,covid-19,practice</span>} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">6</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> htsjdk | 29 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dcm2niix | 21 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> dicom<span class="idiff left right">scope </span> | 20 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> gdcm | <span class="idiff left right">19</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicom<span class="idiff left right">3tools | 18</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> gnumed-server | 18 | {<span class="idiff left right">practice,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dicom<span class="idiff left right">3tools</span> | 20 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> gdcm | <span class="idiff left right">20</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicom<span class="idiff left right">scope | 19</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> gnumed-server | 18 | {<span class="idiff left right">covid-19,practice</span>} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> ngs-sdk | 16 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> gdcm | 13 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> adun.app | 12 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> invesalius | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> adun.app | 11 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> minc-tools | 12 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> nifticlib | 12 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> ngs-sdk | 11 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> nifticlib | 1<span class="idiff left right">1</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> <span class="idiff left right">nifticlib | 11</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> <span class="idiff left right">minc-tools </span> | 10 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> nifticlib | 1<span class="idiff left right">0</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">openslide | 10</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right">plastimatch</span> | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> openslide | 9 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> pixelmed | 9 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> <span class="idiff left right">plastimatch | 9 | {imaging} </span> | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> <span class="idiff left right">vtk-dicom | 9 | {imaging} </span> | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> <span class="idiff left right">biosig | 8 | {imaging,physics}</span> | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> <span class="idiff left right">king | 8 | {imaging,typesetting}</span> | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> orthanc-webviewer | 8 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> <span class="idiff left right">biosig | 7 | {imaging,physics}</span> | </span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> <span class="idiff left right">vtk-dicom | 8 | {imaging} </span> | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> insighttoolkit4 | 7 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> king | 7 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> librg-utils-perl | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> multiqc | 7 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> multiqc | 7 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> biojava-live | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> ea-utils | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> jebl2 | 6 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -48,26 +48,27 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> orthanc-dicomweb | 5 | {covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> bamkit | 4 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> biomaj3-cli | 4 | {cloud} | </span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> bio-tradis | 4 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> bio-tradis | 4 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> emboss-explorer | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> fastlink | 4 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> fastlink | 4 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> libdivsufsort | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> libminc | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> mipe | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> orthanc-mysql | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> orthanc-postgresql | 4 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> paraclu | 4 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> paraclu | 4 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> rambo-k | 4 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> salmon | 4 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> spread-phy | 4 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> staden | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> tracetuner | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> anfo | 3 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> arden | 3 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> assemblytics | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="plaintext"> beast-mcmc | 3 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> beast-mcmc | 3 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> biomaj3-daemon | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> bitseq | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="plaintext"> clonalframeml | 3 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> clonalframeml | 3 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> clonalorigin | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> embassy-domainatrix | 3 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> embassy-domalign | 3 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -83,15 +84,14 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> phyutility | 3 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> piler | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> predictprotein | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> prottest | 3 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext"> prottest | 3 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> quorum | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> runcircos-gui | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> saint | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC90" class="line" lang="plaintext"> salmon | 3 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> sibsim4 | 3 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> spaced | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> stacks | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> biosig | 2 | {<span class="idiff left right">imaging-dev,physics</span>} | </span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext"> biosig | 2 | {<span class="idiff left right">physics,imaging-dev</span>} | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> brig | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> busco | 2 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> canu | 2 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -104,7 +104,7 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> hinge | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> ipig | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> jellyfish1 | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext"> jmodeltest | 2 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext"> jmodeltest | 2 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;"> <span id="LC108" class="line" lang="plaintext"> libbio-mage-utils-perl | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> libmuscle | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> librdp-taxonomy-tree-java | 2 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -112,9 +112,10 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> mhap | 2 | {bio-ngs,bio} | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> microbegps | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> opencfu | 2 | {laboratory} | </span>
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext"> oscar | 2 | {data,tools,practice} | </span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> papyrus | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> pbdagcon | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext"> perm | 2 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext"> perm | 2 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> placnet | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> prime-phylo | 2 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> proalign | 2 | {bio-phylogeny,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -122,8 +123,8 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> qcumber | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> rdp-alignment | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> rdp-classifier | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext"> rtax | 2 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> samblaster | 2 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext"> rtax | 2 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> samblaster | 2 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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128
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> scrm | 2 | {bio} | </span>
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129
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> sga | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> sight | 2 | {imaging} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -133,21 +134,21 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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134
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> suitename | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> surankco | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> yaha | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext"> zalign | 2 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext"> zalign | 2 | {<span class="idiff left right">bio,cloud</span>} | </span>
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138
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> bambamc | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC139" class="line" lang="plaintext"> bbmap | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">-<span id="LC140" class="line" lang="plaintext"> biosig | 1 | {<span class="idiff left right">imaging-dev,physics</span>} | </span>
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="plaintext"> bbmap | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext"> biosig | 1 | {<span class="idiff left right">physics,imaging-dev</span>} | </span>
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141
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> blasr | 1 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext"> cat-bat | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext"> cat-bat | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> ctn | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC145" class="line" lang="plaintext"> delly | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext"> delly | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> emmax | 1 | {bio} | </span>
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148
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<pre style="margin: 0;"> <span id="LC148" class="line" lang="plaintext"> gatb-core | 1 | {bio-dev} | </span>
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149
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> gatb-core | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC149" class="line" lang="plaintext"> htscodecs | 1 | {<span class="idiff left right">covid-19,bio-dev</span>} | </span>
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<pre style="margin: 0;">-<span id="LC150" class="line" lang="plaintext"> intake | 1 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext"> htscodecs | 1 | {<span class="idiff left right">bio-dev,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext"> intake | 1 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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152
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> libbpp-core | 1 | {bio-dev} | </span>
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> libbpp-phyl | 1 | {bio-dev} | </span>
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154
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> libbpp-phyl-omics | 1 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -166,13 +167,12 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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167
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> libqes | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> libseqlib | 1 | {bio-dev} | </span>
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169
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<pre style="margin: 0;"> <span id="LC169" class="line" lang="plaintext"> libstatgen | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="plaintext"> nanosv | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext"> nanosv | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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170
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171
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> ncbi-vdb | 1 | {bio-dev} | </span>
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171
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> openslide | 1 | {imaging-dev} | </span>
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172
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173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> opensurgsim | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC173" class="line" lang="plaintext"> oscar | 1 | {tools,practice,data} | </span>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> pbseqlib | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="plaintext"> plasmidid | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext"> plasmidid | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> plasmidseeker | 1 | {bio} | </span>
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177
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> samtools-legacy | 1 | {bio-dev} | </span>
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178
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="plaintext"> segemehl | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -182,16 +182,16 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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182
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"> simpleitk | 1 | {imaging-dev} | </span>
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183
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext"> simrisc | 1 | {oncology} | </span>
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184
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"> srf | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC185" class="line" lang="plaintext"> thesias | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="plaintext"> thesias | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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186
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> trace2dbest | 1 | {bio} | </span>
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187
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> tvc | 1 | {bio} | </span>
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188
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188
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> vienna-rna | 1 | {bio,covid-19} | </span>
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189
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> yanagiba | 1 | {covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext"> acedb | 0 | {<span class="idiff left right">cloud,bio</span>} | </span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="plaintext"> acedb | 0 | {<span class="idiff left right">bio,cloud</span>} | </span>
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191
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> biojava4-live | 0 | {bio-dev} | </span>
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192
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> biosig | 0 | {physics} | </span>
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193
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193
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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194
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext"> bustools | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="plaintext"> bustools | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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195
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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196
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> cufflinks | 0 | {bio,cloud} | </span>
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197
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> dextractor | 0 | {covid-19,bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -219,19 +219,19 @@ Last-Update: Sat, 28 Nov 2020 01:42:03 +0000</td>
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219
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="plaintext"> pigx-rnaseq | 0 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> pilercr | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC221" class="line" lang="plaintext"> pique | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC222" class="line" lang="plaintext"> pplacer | 0 | {bio-phylogeny,covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC223" class="line" lang="plaintext"> python-seqcluster | 0 | {covid-19,bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="plaintext"> pplacer | 0 | {bio-phylogeny,bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> python-seqcluster | 0 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext"> python-seqcluster | 0 | {bio-dev,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="plaintext"> q2templates | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> sambamba | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> sbmltoolbox | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext"> shovill | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="plaintext"> shovill | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC229" class="line" lang="plaintext"> simpleitk | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC230" class="line" lang="plaintext"> skesa | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC231" class="line" lang="plaintext"> skewer | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC232" class="line" lang="plaintext"> smrtanalysis | 0 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> spaln | 0 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC234" class="line" lang="plaintext"> tophat-recondition | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="plaintext"> tophat-recondition | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC236" class="line" lang="plaintext"> varscan | 0 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> vtk-dicom | 0 | {imaging-dev} | </span>
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