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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/6a88546c92390416e8a24e1b4b56947486d1a67d">6a88546c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-08T13:45:37+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/6a88546c92390416e8a24e1b4b56947486d1a67d#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 08 Dec 2020 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 08 Dec 2020 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   |     Tasks                                           |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> dcmtk                         |    188 | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |    10<span class="idiff left right">0</span> | {imaging,covid-19,practice}                         | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi                   |     5<span class="idiff left right">0</span> | {imaging,covid-19,oncology,laboratory,his,practice} | </span>
</pre>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm                          |     3<span class="idiff left right">6</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> htsjdk                        |     3<span class="idiff left right">0</span> | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |    10<span class="idiff left right">1</span> | {imaging,covid-19,practice}                         | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi                   |     5<span class="idiff left right">2</span> | {imaging,covid-19,oncology,laboratory,his,practice} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm                          |     3<span class="idiff left right">5</span> | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> htsjdk                        |     3<span class="idiff left right">1</span> | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools                   |     23 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> gdcm                          |     21 | {imaging,covid-19}                                  | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dcm2niix                      |     20 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicomscope                    |     19 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> adun.app                      |     17 | {bio}                                               | </span>
</pre>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicomscope                    |     20 | {imaging}                                           | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
15
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14
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> ngs-sdk                       |     17 | {bio-dev}                                           | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> nifticlib                     |     17 | {imaging}                                           | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> adun.app                      |     16 | {bio}                                               | </span>
</pre>
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16
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<td class="diff-line-num new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> gnumed-server                 |     16 | {covid-19,practice}                                 | </span>
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<td class="diff-line-num new_line old" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> nifticlib                     |     16 | {imaging}                                           | </span>
</pre>
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18
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> gdcm                          |     14 | {imaging-dev}                                       | </span>
</pre>
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19
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> invesalius                    |     14 | {imaging}                                           | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> gdcm                          |     15 | {imaging-dev}                                       | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> invesalius                    |     15 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> minc-tools                    |     14 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> n<span class="idiff left right">ifticlib                     |     12 | {imaging-dev}</span>                                       | </span>
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<td class="diff-line-num new old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> n<span class="idiff left right">gs-sdk                       |     11 | {bio-dev}    </span>                                       | </span>
</pre>
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22
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22
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> ngs-sdk                       |     10 | {bio-dev}                                           | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> nifticlib                     |     10 | {imaging-dev}                                       | </span>
</pre>
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23
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24
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> openslide                     |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> pixelmed                      |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> biosig                        |      9 | {imaging,physics}                                   | </span>
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<td class="diff-line-num old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
27
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> ea-utils                      |      9 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> insighttoolkit4               |      9 | {imaging-dev}                                       | </span>
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<td class="diff-line-num old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
28
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28
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> librg-utils-perl              |      9 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> orthanc-webviewer             |      9 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> plastimatch                   |      9 | {imaging}                                           | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -35,25 +35,28 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> salmon                        |      8 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> seqsero                       |      8 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> vtk-dicom                     |      8 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> bamkit                        |      7 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> biojava-live                  |      7 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> fastlink                      |      7 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> insighttoolkit4               |      7 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> nifti2dicom                   |      7 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> orthanc-dicomweb              |      7 | {imaging,covid-19}                                  | </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> pymia                         |      7 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> staden                        |      7 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> treeview                      |      7 | {bio-phylogeny,bio}                                 | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> arden                         |      6 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> bamkit                        |      6 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> bart-view                     |      6 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> dicompyler                    |      6 | {oncology}                                          | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> libncl                        |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> libpal-java                   |      6 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> obitools                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> orthanc-mysql                 |      6 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> orthanc-postgresql            |      6 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> pymia                         |      6 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> rambo-k                       |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> anfo                          |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> beast-mcmc                    |      5 | {bio,bio-phylogeny}                                 | </span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> biomaj3-cli                   |      5 | {cloud}                                             | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> bio-tradis                    |      5 | {bio,bio-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> dicompyler                    |      5 | {oncology}                                          | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> ecopcr                        |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> elastix                       |      5 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> embassy-domainatrix           |      5 | {bio,cloud}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -64,8 +67,6 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> libdivsufsort                 |      5 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> metaphlan2                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> mipe                          |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="plaintext"> multiqc                       |      5 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="plaintext"> obitools                      |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> paraclu                       |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> phybin                        |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> placnet                       |      5 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> tracetuner                    |      5 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> zalign                        |      5 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> assemblytics                  |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="plaintext"> biomaj3-<span class="idiff left right">cli                   |      4 | {cloud}</span>                                             | </span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> biomaj3-<span class="idiff left right">daemon                |      4 | {bio}  </span>                                             | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> bitseq                        |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> brig                          |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> clonalframeml                 |      4 | {covid-19,bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="108" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> sprai                         |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> stacks                        |      4 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> surankco                      |      4 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext"> biomaj3-daemon                |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> busco                         |      3 | {bio,covid-19}                                      | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> canu                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> dindel                        |      3 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="119" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -119,7 +119,6 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> proalign                      |      3 | {bio,bio-phylogeny}                                 | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> rtax                          |      3 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> salmid                        |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC122" class="line" lang="plaintext"> sight                         |      3 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> soapaligner                   |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> soapsnp                       |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> suitename                     |      3 | {bio}                                               | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -128,15 +127,18 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="plaintext"> blasr                         |      2 | {bio,bio-ngs}                                       | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> emboss-explorer               |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> gatb-core                     |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext"> gifticlib                     |      2 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> libbio-mage-utils-perl        |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> libctapimkt                   |      2 | {practice}                                          | </span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> libmuscle                     |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext"> multiqc                       |      2 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> oscar                         |      2 | {data,tools,practice}                               | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> pscan-chip                    |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="plaintext"> qcumber                       |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> samblaster                    |      2 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> segemehl                      |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> seqan                         |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext"> sight                         |      2 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> simpleitk                     |      2 | {imaging-dev}                                       | </span>
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141
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> tvc                           |      2 | {bio}                                               | </span>
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<td class="diff-line-num old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> acedb                         |      1 | {bio,cloud}                                         | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -144,9 +146,9 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<td class="diff-line-num new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> bbmap                         |      1 | {bio,covid-19}                                      | </span>
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<td class="diff-line-num new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
147
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> biosig                        |      1 | {imaging-dev,physics}                               | </span>
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<td class="diff-line-num new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC148" class="line" lang="plaintext"> blimps                        |      1 | {bio}                                               | </span>
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<td class="diff-line-num new_line old" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext"> cat-bat                       |      1 | {bio,covid-19}                                      | </span>
</pre>
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149
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> ctn                           |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC150" class="line" lang="plaintext"> delly                         |      1 | {covid-19,bio}                                      | </span>
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<td class="diff-line-num new old_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext"> emmax                         |      1 | {bio}                                               | </span>
</pre>
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150
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<td class="diff-line-num new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> gatb-core                     |      1 | {bio-dev}                                           | </span>
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> intake                        |      1 | {bio,bio-dev}                                       | </span>
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<td class="diff-line-num old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> libbpp-core                   |      1 | {bio-dev}                                           | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -188,9 +190,9 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> bmtk                          |      0 | {psychology}                                        | </span>
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<td class="diff-line-num new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> bustools                      |      0 | {bio,covid-19}                                      | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> camp                          |      0 | {imaging-dev}                                       | </span>
</pre>
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<td class="diff-line-num new new_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="plaintext"> cat-bat                       |      0 | {bio,covid-19}                                      | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> cufflinks                     |      0 | {cloud,bio}                                         | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="plaintext"> dextractor                    |      0 | {covid-19,bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> emmax                         |      0 | {bio}                                               | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> fis-gtm                       |      0 | {his}                                               | </span>
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> htscodecs                     |      0 | {bio-dev,covid-19}                                  | </span>
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> kmerresistance                |      0 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -218,8 +220,8 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> pique                         |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC221" class="line" lang="plaintext"> pplacer                       |      0 | {covid-19,bio-phylogeny,bio}                        | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> python-bcbio-gff              |      0 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> python-seqcluster             |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> python-seqcluster             |      0 | {bio-dev,covid-19}                                  | </span>
</pre>
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext"> python-seqcluster             |      0 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="plaintext"> q2templates                   |      0 | {bio,bio-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> resfinder-db                  |      0 | {bio}                                               | </span>
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<td class="diff-line-num old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> sambamba                      |      0 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="243" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -243,5 +245,5 @@ Last-Update: Tue, 08 Dec 2020 01:42:03 +0000</td>
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<td class="diff-line-num new_line" data-linenumber="245" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="plaintext"> q2-sample-classifier          |     -1 | {bio-dev,bio}                                       | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC246" class="line" lang="plaintext"> sight                         |     -1 | {imaging-dev}                                       | </span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="plaintext"> svim                          |     -1 | {bio}                                               | </span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="246" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC246" class="line" lang="plaintext">(27<span class="idiff left right">2</span> rows)</span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="247" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
</td>
<td class="diff-line-num new new_line" data-linenumber="248" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="plaintext">(27<span class="idiff left right">4</span> rows)</span>
</pre>
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<td class="diff-line-num new_line" data-linenumber="249" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC249" class="line" lang="plaintext"></span></pre>
</td>
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