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GitLab

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<h3>

Andreas Tille pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/nipy">Debian Med / nipy</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc">4325c2ec</a></strong>

<div>

<span>by Andreas Tille</span>

<i>at 2020-12-08T12:01:46+01:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.4.3~rc1</pre>

</li>

</ul>

<h4>22 changed files:</h4>

<ul>

<li class="file-stats">

<a href="#961d2007ddaacf60fb7db9dd5246cf601bc343ec">

.appveyor.yml

</a>

</li>

<li class="file-stats">

<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">

.travis.yml

</a>

</li>

<li class="file-stats">

<a href="#f45ad0276054e472873eea956fd73510e50e55e2">

doc-requirements.txt

</a>

</li>

<li class="file-stats">

<a href="#f6a2c1441cc6c1ca1e1d001d1975df9ada721cc3">

nipy/COMMIT_INFO.txt

</a>

</li>

<li class="file-stats">

<a href="#b6575634903d47c09bf7eab3fec850ed38d8197a">

nipy/algorithms/clustering/tests/test_vmm.py

</a>

</li>

<li class="file-stats">

<a href="#de8dbf3ccb21624e7040fd7e1d5219ed614d0f78">

nipy/algorithms/clustering/von_mises_fisher_mixture.py

</a>

</li>

<li class="file-stats">

<a href="#174f03fd7e331dc3153d7bfe680e05263a0ece84">

nipy/algorithms/diagnostics/tests/test_screen.py

</a>

</li>

<li class="file-stats">

<a href="#fc85a132ef1ce398bb5c88603327529c2b956e5d">

nipy/algorithms/registration/tests/test_fmri_realign4d.py

</a>

</li>

<li class="file-stats">

<a href="#8070ff2510e7f743b31439d700f904a38d11b31d">

nipy/algorithms/statistics/formula/formulae.py

</a>

</li>

<li class="file-stats">

<a href="#df73b6ab5b4705b1471df1110ca013209edb0fca">

nipy/algorithms/statistics/rft.py

</a>

</li>

<li class="file-stats">

<a href="#a8a713e23006a8e0aa642cb63629c8e7400a35f2">

nipy/algorithms/statistics/tests/test_rft.py

</a>

</li>

<li class="file-stats">

<a href="#30180d9268bc47b27bdd6483385e26292ffd312f">

nipy/fixes/numpy/testing/nosetester.py

</a>

</li>

<li class="file-stats">

<a href="#02e24cb6071e7e152b44a994fcbaf6d027c0d745">

nipy/info.py

</a>

</li>

<li class="file-stats">

<a href="#6998b22c2555d5c76e76509aef7c3d2ac55721e3">

nipy/labs/group/permutation_test.py

</a>

</li>

<li class="file-stats">

<a href="#077e7e41c4a704129dc6da286109b5e3bd2d7836">

nipy/labs/viz_tools/test/test_activation_maps.py

</a>

</li>

<li class="file-stats">

<a href="#50321e58064fb57b5e80ebaa6afa8424c9a39ec8">

nipy/labs/viz_tools/test/test_cm.py

</a>

</li>

<li class="file-stats">

<a href="#4d740eee588a77c8372ab7e44489bd6157a546cd">

nipy/labs/viz_tools/test/test_slicers.py

</a>

</li>

<li class="file-stats">

<a href="#d7cd99190433490dbdb030f61ab1b87b9e623d3d">

nipy/modalities/fmri/tests/test_aliases.py

</a>

</li>

<li class="file-stats">

<a href="#0d0f6da56b01941bca2a4c9da35656ebb52e4277">

nipy/testing/__init__.py

</a>

</li>

<li class="file-stats">

<a href="#9fbc31cd508aecc4dc6ce4cad9dda275d08d959a">

nipy/testing/decorators.py

</a>

</li>

<li class="file-stats">

<a href="#e3204e5e466f326b9f2e32a6790b1397eacc0018">

nipy/tests/test_scripts.py

</a>

</li>

<li class="file-stats">

<a href="#19359a61ae2446b51b549167b014da2fcf265768">

requirements.txt

</a>

</li>

</ul>

<h4>Changes:</h4>

<li id="961d2007ddaacf60fb7db9dd5246cf601bc343ec">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#961d2007ddaacf60fb7db9dd5246cf601bc343ec"><strong>.appveyor.yml</strong></a>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,12 +10,12 @@ environment:</td>

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<pre style="margin: 0;"> <span id="LC10" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python27-x64</span></span>

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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="yaml">      <span class="c1" style="color: #998; font-style: italic;"># Doctest fail from the long Ls, as in (1L, 2L) != (1, 2)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="yaml">      <span class="na" style="color: #008080;">EXTRA_FLAGS</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">--without-doctest"</span></span>

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<td class="diff-line-num new_line old" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC13" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python34</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC14" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python34-x64</span></span>

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<pre style="margin: 0;">-<span id="LC15" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python35</span></span>

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<pre style="margin: 0;">-<span id="LC16" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python35-x64</span></span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python36</span></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python36-x64</span></span>

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<pre style="margin: 0;">+<span id="LC15" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python37</span></span>

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<pre style="margin: 0;">+<span id="LC16" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python37-x64</span></span>

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<pre style="margin: 0;">+<span id="LC17" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python38</span></span>

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<pre style="margin: 0;">+<span id="LC18" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">PYTHON</span><span class="pi">:</span> <span class="s" style="color: #d14;">C:\Python38-x64</span></span>

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<pre style="margin: 0;"> <span id="LC19" class="line" lang="yaml"></span>

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<pre style="margin: 0;"> <span id="LC20" class="line" lang="yaml"><span class="na" style="color: #008080;">install</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="yaml">  <span class="c1" style="color: #998; font-style: italic;"># Prepend newly installed Python to the PATH of this build (this cannot be</span></span>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -29,7 +29,7 @@ install:</td>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="yaml">  <span class="pi">-</span> <span class="s" style="color: #d14;">echo "C:\Program Files\Microsoft SDKs\Windows\v7.1\Bin\SetEnv.cmd" /x64 > "C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\bin\amd64/vcvars64.bat"</span></span>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="yaml"></span>

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<pre style="margin: 0;"> <span id="LC31" class="line" lang="yaml">  <span class="c1" style="color: #998; font-style: italic;"># Install the dependencies of the project.</span></span>

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<pre style="margin: 0;">-<span id="LC32" class="line" lang="yaml">  <span class="pi">-</span> <span class="s" style="color: #d14;">pip install numpy Cython nose nibabel <span class="idiff left right">sympy</span> scipy</span></span>

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<pre style="margin: 0;">+<span id="LC32" class="line" lang="yaml">  <span class="pi">-</span> <span class="s" style="color: #d14;">pip install numpy Cython nose nibabel <span class="idiff left right">"sympy<1.6"</span> scipy</span></span>

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<pre style="margin: 0;"> <span id="LC33" class="line" lang="yaml">  <span class="c1" style="color: #998; font-style: italic;"># Pin wheel to 0.26 to avoid Windows ABI tag for built wheel</span></span>

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<pre style="margin: 0;"> <span id="LC34" class="line" lang="yaml">  <span class="pi">-</span> <span class="s" style="color: #d14;">pip install wheel==0.26</span></span>

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<pre style="margin: 0;"> <span id="LC35" class="line" lang="yaml">  <span class="c1" style="color: #998; font-style: italic;"># install</span></span>

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<br>

</li>

<li id="dea01dd89a3b602828e630677fde5d77c06441c8">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#dea01dd89a3b602828e630677fde5d77c06441c8"><strong>.travis.yml</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,7 +14,7 @@ cache:</td>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="yaml"></span>

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="yaml"><span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="yaml">  <span class="na" style="color: #008080;">global</span><span class="pi">:</span></span>

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<pre style="margin: 0;">-<span id="LC17" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">DEPENDS="numpy scipy sympy matplotlib nibabel"</span></span>

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<pre style="margin: 0;">+<span id="LC17" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">DEPENDS="numpy scipy sympy<span class="idiff left right"><1.6</span> matplotlib nibabel"</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC18" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">EXTRA_WHEELS="https://5cf40426d9f06eb7461d-6fe47d9331aba7cd62fc36c7196769e4.ssl.cf2.rackcdn.com"</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC19" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">PRE_WHEELS="https://7933911d6844c6c53a7d-47bd50c35cd79bd838daf386af554a83.ssl.cf2.rackcdn.com"</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC20" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">EXTRA_PIP_FLAGS="--find-links=$EXTRA_WHEELS"</span></span>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">INSTALL_TYPE="pip"</span></span>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="yaml"></span>

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="yaml"><span class="na" style="color: #008080;">python</span><span class="pi">:</span></span>

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<pre style="margin: 0;">-<span id="LC25" class="line" lang="yaml">    <span class="pi">-</span> <span class="m" style="color: #099;">3.4</span></span>

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<pre style="margin: 0;">-<span id="LC26" class="line" lang="yaml">    <span class="pi">-</span> <span class="m" style="color: #099;">3.5</span></span>

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="yaml">    <span class="pi">-</span> <span class="m" style="color: #099;">3.6</span></span>

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="yaml">    <span class="pi">-</span> <span class="m" style="color: #099;">3.7</span></span>

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<pre style="margin: 0;">+<span id="LC27" class="line" lang="yaml">    <span class="pi">-</span> <span class="m" style="color: #099;">3.8</span></span>

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="yaml"></span>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="yaml"><span class="na" style="color: #008080;">matrix</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="yaml">  <span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

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<pre style="margin: 0;"> <span id="LC38" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">PRE_DEPENDS="numpy==1.6.0"</span></span>

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<pre style="margin: 0;"> <span id="LC39" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">DEPENDS="scipy==0.9.0 sympy==0.7.0 nibabel==1.2.0"</span></span>

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<pre style="margin: 0;"> <span id="LC40" class="line" lang="yaml">    <span class="c1" style="color: #998; font-style: italic;"># Test compiling against external lapack</span></span>

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<pre style="margin: 0;">-<span id="LC41" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">4</span></span></span>

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<pre style="margin: 0;">+<span id="LC41" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">6</span></span></span>

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<pre style="margin: 0;"> <span id="LC42" class="line" lang="yaml">      <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC43" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">NIPY_EXTERNAL_LAPACK=1</span></span>

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<pre style="margin: 0;"> <span id="LC44" class="line" lang="yaml">      <span class="na" style="color: #008080;">addons</span><span class="pi">:</span></span>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -59,17 +59,17 @@ matrix:</td>

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<pre style="margin: 0;"> <span id="LC59" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">INSTALL_TYPE=requirements</span></span>

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<pre style="margin: 0;"> <span id="LC60" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">DEPENDS=</span></span>

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<pre style="margin: 0;"> <span id="LC61" class="line" lang="yaml">    <span class="c1" style="color: #998; font-style: italic;"># test 3.5 against pre-release builds of everything</span></span>

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<pre style="margin: 0;">-<span id="LC62" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">5</span></span></span>

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<pre style="margin: 0;">+<span id="LC62" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">6</span></span></span>

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<pre style="margin: 0;"> <span id="LC63" class="line" lang="yaml">      <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC64" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">EXTRA_PIP_FLAGS="$PRE_PIP_FLAGS"</span></span>

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<pre style="margin: 0;"> <span id="LC65" class="line" lang="yaml">    <span class="c1" style="color: #998; font-style: italic;"># test python setup.py install</span></span>

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<pre style="margin: 0;">-<span id="LC66" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">5</span></span></span>

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<pre style="margin: 0;">+<span id="LC66" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">6</span></span></span>

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<pre style="margin: 0;"> <span id="LC67" class="line" lang="yaml">      <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC68" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">INSTALL_TYPE=setup</span></span>

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<pre style="margin: 0;">-<span id="LC69" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">5</span></span></span>

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<pre style="margin: 0;">+<span id="LC69" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">6</span></span></span>

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<pre style="margin: 0;"> <span id="LC70" class="line" lang="yaml">      <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC71" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">INSTALL_TYPE="pip_e"</span></span>

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<pre style="margin: 0;">-<span id="LC72" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">5</span></span></span>

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<pre style="margin: 0;">+<span id="LC72" class="line" lang="yaml">    <span class="pi">-</span> <span class="na" style="color: #008080;">python</span><span class="pi">:</span> <span class="m" style="color: #099;">3.<span class="idiff left right">6</span></span></span>

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<pre style="margin: 0;"> <span id="LC73" class="line" lang="yaml">      <span class="na" style="color: #008080;">env</span><span class="pi">:</span></span>

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<pre style="margin: 0;"> <span id="LC74" class="line" lang="yaml">        <span class="pi">-</span> <span class="s" style="color: #d14;">DOC_BUILD=1</span></span>

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<pre style="margin: 0;"> <span id="LC75" class="line" lang="yaml">      <span class="na" style="color: #008080;">addons</span><span class="pi">:</span></span>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -94,7 +94,9 @@ before_install:</td>

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<pre style="margin: 0;"> <span id="LC94" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">if [ -n "$PRE_DEPENDS" ]; then</span></span>

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<pre style="margin: 0;"> <span id="LC95" class="line" lang="yaml">      <span class="s" style="color: #d14;">pip install $EXTRA_PIP_FLAGS $PRE_DEPENDS;</span></span>

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<pre style="margin: 0;"> <span id="LC96" class="line" lang="yaml">      <span class="s" style="color: #d14;">fi</span></span>

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<pre style="margin: 0;">-<span id="LC97" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">pip install $EXTRA_PIP_FLAGS $DEPENDS</span></span>

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<pre style="margin: 0;">+<span id="LC97" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">if [ -n "$DEPENDS" ]; then</span></span>

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<pre style="margin: 0;">+<span id="LC98" class="line" lang="yaml">      <span class="s" style="color: #d14;">pip install $EXTRA_PIP_FLAGS $DEPENDS;</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC99" class="line" lang="yaml">      <span class="s" style="color: #d14;">fi</span></span>

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<pre style="margin: 0;"> <span id="LC100" class="line" lang="yaml">    <span class="pi">-</span> <span class="s" style="color: #d14;">if [ "${COVERAGE}" == "1" ]; then</span></span>

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<pre style="margin: 0;"> <span id="LC101" class="line" lang="yaml">      <span class="s" style="color: #d14;">pip install coverage;</span></span>

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<pre style="margin: 0;"> <span id="LC102" class="line" lang="yaml">      <span class="s" style="color: #d14;">pip install coveralls codecov;</span></span>

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<br>

</li>

<li id="f45ad0276054e472873eea956fd73510e50e55e2">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#f45ad0276054e472873eea956fd73510e50e55e2"><strong>doc-requirements.txt</strong></a>

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># Requirements for building docs</span>

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"># Check these dependencies against doc/conf.py</span>

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">-r dev-requirements.txt</span>

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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/sphinx" rel="nofollow noreferrer noopener" target="_blank">sphinx</a>>=1.0</span>

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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/numpydoc" rel="nofollow noreferrer noopener" target="_blank">numpydoc</a></span>

</pre>

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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/sphinx" rel="nofollow noreferrer noopener" target="_blank">sphinx</a>>=1.0<span class="idiff left right">,<3.0</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

5

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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/numpydoc" rel="nofollow noreferrer noopener" target="_blank">numpydoc</a><span class="idiff left right">==0.8.0</span></span>

</pre>

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6

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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/matplotlib" rel="nofollow noreferrer noopener" target="_blank">matplotlib</a></span>

</pre>

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7

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7

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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/texext" rel="nofollow noreferrer noopener" target="_blank">texext</a></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/ipython" rel="nofollow noreferrer noopener" target="_blank">ipython</a></span></pre>

</td>

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<br>

</li>

<li id="f6a2c1441cc6c1ca1e1d001d1975df9ada721cc3">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#f6a2c1441cc6c1ca1e1d001d1975df9ada721cc3"><strong>nipy/COMMIT_INFO.txt</strong></a>

<hr>

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<td class="diff-line-num old_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

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<td class="diff-line-num new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># This is an ini file that may contain information about the code state</span>

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2

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2

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">[commit hash]</span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"># The line below may contain a valid hash if it has been substituted during 'git archive'</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

4

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<td class="diff-line-num new_line old" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">archive_subst_hash=<span class="idiff left right">eb649170</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">archive_subst_hash=<span class="idiff left right">a2e0e06f5</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"># This line may be modified by the install process</span>

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<td class="diff-line-num old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">install_hash=</span></pre>

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</table>

<br>

</li>

<li id="b6575634903d47c09bf7eab3fec850ed38d8197a">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#b6575634903d47c09bf7eab3fec850ed38d8197a"><strong>nipy/algorithms/clustering/tests/test_vmm.py</strong></a>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,8 +12,17 @@ from ..von_mises_fisher_mixture import (VonMisesMixture,</td>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python">                                        <span class="n" style="color: #333;">select_vmm</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python">                                        <span class="n" style="color: #333;">select_vmm_cv</span><span class="p">)</span></span>

</pre>

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14

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC15" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

16

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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nose.tools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">assert_true</span><span class="p">,</span> <span class="n" style="color: #333;">assert_equal</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC17" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">decorators</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">dec</span></span>

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<pre style="margin: 0;">+<span id="LC20" class="line" lang="python">    <span class="n" style="color: #333;">decorators</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dec</span></span>

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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC21" class="line" lang="python"></span>

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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nibabel.optpkg</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">optional_package</span></span>

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<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"><span class="n" style="color: #333;">matplotlib</span><span class="p">,</span> <span class="n" style="color: #333;">HAVE_MPL</span><span class="p">,</span> <span class="n" style="color: #333;">_</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">optional_package</span><span class="p">(</span><span class="s" style="color: #d14;">'matplotlib'</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="python"><span class="n" style="color: #333;">needs_mpl</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">decorators</span><span class="p">.</span><span class="n" style="color: #333;">skipif</span><span class="p">(</span><span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">HAVE_MPL</span><span class="p">,</span> <span class="s" style="color: #d14;">"Test needs matplotlib"</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_spherical_area</span><span class="p">():</span></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -38,6 +47,18 @@ def test_von_mises_fisher_density():</td>

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<pre style="margin: 0;"> <span id="LC47" class="line" lang="python">                            <span class="o" style="font-weight: 600;"><</span> <span class="mf" style="color: #099;">1e-2</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC48" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC49" class="line" lang="python"></span>

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<pre style="margin: 0;">+<span id="LC50" class="line" lang="python"><span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">needs_mpl</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC51" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_von_mises_fisher_show</span><span class="p">():</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC52" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Smoke test for VonMisesMixture.show</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC53" class="line" lang="python">    <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">random</span><span class="p">.</span><span class="n" style="color: #333;">randn</span><span class="p">(</span><span class="mi" style="color: #099;">100</span><span class="p">,</span> <span class="mi" style="color: #099;">3</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC54" class="line" lang="python">    <span class="n" style="color: #333;">x</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">T</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">sqrt</span><span class="p">(</span><span class="n" style="color: #333;">np</span><span class="p">.</span><span class="nb" style="color: #0086b3;">sum</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">**</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">))).</span><span class="n" style="color: #333;">T</span></span>

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<pre style="margin: 0;">+<span id="LC55" class="line" lang="python">    <span class="n" style="color: #333;">vmd</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">VonMisesMixture</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC56" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Need to estimate to avoid error in show</span></span>

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<pre style="margin: 0;">+<span id="LC57" class="line" lang="python">    <span class="n" style="color: #333;">vmd</span><span class="p">.</span><span class="n" style="color: #333;">estimate</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC58" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Check that show does not raise an error</span></span>

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<pre style="margin: 0;">+<span id="LC59" class="line" lang="python">    <span class="n" style="color: #333;">vmd</span><span class="p">.</span><span class="n" style="color: #333;">show</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC60" class="line" lang="python"></span>

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<pre style="margin: 0;">+<span id="LC61" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC62" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_dimension_selection_bic</span><span class="p">():</span></span>

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<pre style="margin: 0;"> <span id="LC63" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Tests whether dimension selection yields correct results</span></span>

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<pre style="margin: 0;"> <span id="LC64" class="line" lang="python">    <span class="n" style="color: #333;">x1</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="mf" style="color: #099;">0.6</span><span class="p">,</span> <span class="mf" style="color: #099;">0.48</span><span class="p">,</span> <span class="mf" style="color: #099;">0.64</span><span class="p">]</span></span>

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<br>

</li>

<li id="de8dbf3ccb21624e7040fd7e1d5219ed614d0f78">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#de8dbf3ccb21624e7040fd7e1d5219ed614d0f78"><strong>nipy/algorithms/clustering/von_mises_fisher_mixture.py</strong></a>

<hr>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -233,8 +233,13 @@ class VonMisesMixture(object):</td>

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<pre style="margin: 0;"> <span id="LC233" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC234" class="line" lang="python"><span class="s" style="color: #d14;">        Parameters</span></span>

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<pre style="margin: 0;"> <span id="LC235" class="line" lang="python"><span class="s" style="color: #d14;">        ----------</span></span>

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<pre style="margin: 0;">-<span id="LC236" class="line" lang="python"><span class="s" style="color: #d14;">        x: array <span class="idiff left right">fo shape(n,</span>3)</span></span>

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<pre style="margin: 0;">+<span id="LC236" class="line" lang="python"><span class="s" style="color: #d14;">        x: array <span class="idiff left right">of shape (n, </span>3)</span></span>

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<pre style="margin: 0;"> <span id="LC237" class="line" lang="python"><span class="s" style="color: #d14;">           should be on the unit sphere</span></span>

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<pre style="margin: 0;">+<span id="LC238" class="line" lang="python"></span>

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<pre style="margin: 0;">+<span id="LC239" class="line" lang="python"><span class="s" style="color: #d14;">        Notes</span></span>

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<pre style="margin: 0;">+<span id="LC240" class="line" lang="python"><span class="s" style="color: #d14;">        -----</span></span>

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<pre style="margin: 0;">+<span id="LC241" class="line" lang="python"></span>

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<pre style="margin: 0;">+<span id="LC242" class="line" lang="python"><span class="s" style="color: #d14;">        Uses ``matplotlib``.</span></span>

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<pre style="margin: 0;"> <span id="LC243" class="line" lang="python"><span class="s" style="color: #d14;">        """</span></span>

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<pre style="margin: 0;"> <span id="LC244" class="line" lang="python">        <span class="c1" style="color: #998; font-style: italic;"># label the data</span></span>

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<pre style="margin: 0;"> <span id="LC245" class="line" lang="python">        <span class="n" style="color: #333;">z</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">argmax</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">responsibilities</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">),</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span></span>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -243,7 +248,7 @@ class VonMisesMixture(object):</td>

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<pre style="margin: 0;"> <span id="LC248" class="line" lang="python">        <span class="n" style="color: #333;">fig</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">pylab</span><span class="p">.</span><span class="n" style="color: #333;">figure</span><span class="p">()</span></span>

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<pre style="margin: 0;"> <span id="LC249" class="line" lang="python">        <span class="n" style="color: #333;">ax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">p3</span><span class="p">.</span><span class="n" style="color: #333;">Axes3D</span><span class="p">(</span><span class="n" style="color: #333;">fig</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC250" class="line" lang="python">        <span class="n" style="color: #333;">colors</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">([</span><span class="s" style="color: #d14;">'b'</span><span class="p">,</span> <span class="s" style="color: #d14;">'g'</span><span class="p">,</span> <span class="s" style="color: #d14;">'r'</span><span class="p">,</span> <span class="s" style="color: #d14;">'c'</span><span class="p">,</span> <span class="s" style="color: #d14;">'m'</span><span class="p">,</span> <span class="s" style="color: #d14;">'y'</span><span class="p">,</span> <span class="s" style="color: #d14;">'k'</span><span class="p">,</span> <span class="s" style="color: #d14;">'w'</span><span class="p">]</span> <span class="o" style="font-weight: 600;">*</span> \</span>

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<pre style="margin: 0;">-<span id="LC246" class="line" lang="python">                      <span class="p">(</span><span class="mi" style="color: #099;">1</span> <span class="o" style="font-weight: 600;">+</span> <span class="p">(</span><span class="mi" style="color: #099;">1</span> <span class="o" style="font-weight: 600;">+</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">k</span><span class="p">)</span> <span class="o" style="font-weight: 600;">/</span> <span class="mi" style="color: #099;">8</span><span class="p">))[:</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">k</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">]</span></span>

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<pre style="margin: 0;">+<span id="LC251" class="line" lang="python">                      <span class="p">(</span><span class="mi" style="color: #099;">1</span> <span class="o" style="font-weight: 600;">+</span> <span class="p">(</span><span class="mi" style="color: #099;">1</span> <span class="o" style="font-weight: 600;">+</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">k</span><span class="p">)</span> <span class="o" style="font-weight: 600;">/<span class="idiff left right">/</span></span> <span class="mi" style="color: #099;">8</span><span class="p">))[:</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">k</span> <span class="o" style="font-weight: 600;">+</span> <span class="mi" style="color: #099;">1</span><span class="p">]</span></span>

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<pre style="margin: 0;"> <span id="LC252" class="line" lang="python">        <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">null_class</span><span class="p">)</span> <span class="ow" style="font-weight: 600;">and</span> <span class="p">(</span><span class="n" style="color: #333;">z</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">).</span><span class="nb" style="color: #0086b3;">any</span><span class="p">():</span></span>

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<pre style="margin: 0;"> <span id="LC253" class="line" lang="python">            <span class="n" style="color: #333;">ax</span><span class="p">.</span><span class="n" style="color: #333;">plot3D</span><span class="p">(</span><span class="n" style="color: #333;">x</span><span class="p">[</span><span class="n" style="color: #333;">z</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">0</span><span class="p">],</span> <span class="n" style="color: #333;">x</span><span class="p">[</span><span class="n" style="color: #333;">z</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">],</span> <span class="n" style="color: #333;">x</span><span class="p">[</span><span class="n" style="color: #333;">z</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="mi" style="color: #099;">2</span><span class="p">],</span> <span class="s" style="color: #d14;">'.'</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC254" class="line" lang="python">                      <span class="n" style="color: #333;">color</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">colors</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">])</span></span>

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<li id="174f03fd7e331dc3153d7bfe680e05263a0ece84">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#174f03fd7e331dc3153d7bfe680e05263a0ece84"><strong>nipy/algorithms/diagnostics/tests/test_screen.py</strong></a>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,7 +23,13 @@ from nibabel.tmpdirs import InTemporaryDirectory</td>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nose.tools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="p">(</span><span class="n" style="color: #333;">assert_true</span><span class="p">,</span> <span class="n" style="color: #333;">assert_false</span><span class="p">,</span> <span class="n" style="color: #333;">assert_equal</span><span class="p">,</span> <span class="n" style="color: #333;">assert_raises</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="p">(</span><span class="n" style="color: #333;">assert_array_equal</span><span class="p">,</span> <span class="n" style="color: #333;">assert_array_almost_equal</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python">                           <span class="n" style="color: #333;">assert_almost_equal</span><span class="p">,</span> <span class="n" style="color: #333;">decorators</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python">                           <span class="n" style="color: #333;">assert_almost_equal</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">decorators</span></span>

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<pre style="margin: 0;">+<span id="LC30" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<pre style="margin: 0;">+<span id="LC31" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">dec</span></span>

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<pre style="margin: 0;">+<span id="LC32" class="line" lang="python">    <span class="n" style="color: #333;">decorators</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dec</span></span>

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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nipy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">funcfile</span></span>

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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nipy.testing.decorators</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">needs_mpl_agg</span></span>

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</li>

<li id="fc85a132ef1ce398bb5c88603327529c2b956e5d">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#fc85a132ef1ce398bb5c88603327529c2b956e5d"><strong>nipy/algorithms/registration/tests/test_fmri_realign4d.py</strong></a>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -120,7 +120,7 @@ def test_realign4d_incompatible_args():</td>

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<pre style="margin: 0;"> <span id="LC120" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_realign4d</span><span class="p">():</span></span>

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<pre style="margin: 0;"> <span id="LC121" class="line" lang="python">    <span class="s" style="color: #d14;">"""</span></span>

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<pre style="margin: 0;"> <span id="LC122" class="line" lang="python"><span class="s" style="color: #d14;">    This tests whether realign4d yields the same results depending on</span></span>

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<pre style="margin: 0;">-<span id="LC123" class="line" lang="python"><span class="s" style="color: #d14;">    whether the slice order is input explicit<span class="idiff left right">e</span>ly or as</span></span>

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<pre style="margin: 0;">+<span id="LC123" class="line" lang="python"><span class="s" style="color: #d14;">    whether the slice order is input explicitly or as</span></span>

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<pre style="margin: 0;"> <span id="LC124" class="line" lang="python"><span class="s" style="color: #d14;">    slice_times='ascending'.</span></span>

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<pre style="margin: 0;"> <span id="LC125" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC126" class="line" lang="python"><span class="s" style="color: #d14;">    Due to the very small size of the image used for testing (only 3</span></span>

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<li id="8070ff2510e7f743b31439d700f904a38d11b31d">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#8070ff2510e7f743b31439d700f904a38d11b31d"><strong>nipy/algorithms/statistics/formula/formulae.py</strong></a>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -267,10 +267,10 @@ class FactorTerm(Term):</td>

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<pre style="margin: 0;"> <span id="LC267" class="line" lang="python">            <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;">Symbol</span><span class="p">.</span><span class="n" style="color: #333;">__mul__</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">other</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC268" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC269" class="line" lang="python"></span>

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<pre style="margin: 0;">-<span id="LC270" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Beta</span><span class="p">(</span><span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;"><span class="idiff left">symbol</span></span><span class="p"><span class="idiff right">.</span></span><span class="n" style="color: #333;">Dummy</span><span class="p">):</span></span>

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<pre style="margin: 0;">+<span id="LC270" class="line" lang="python"><span class="k" style="font-weight: 600;">class</span> <span class="nc" style="color: #458; font-weight: 600;">Beta</span><span class="p">(</span><span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;">Dummy</span><span class="p">):</span></span>

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<pre style="margin: 0;"> <span id="LC271" class="line" lang="python">    <span class="s" style="color: #d14;">''' A symbol tied to a Term `term` '''</span></span>

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<pre style="margin: 0;"> <span id="LC272" class="line" lang="python">    <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">__new__</span><span class="p">(</span><span class="n" style="color: #333;">cls</span><span class="p">,</span> <span class="n" style="color: #333;">name</span><span class="p">,</span> <span class="n" style="color: #333;">term</span><span class="p">):</span></span>

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<pre style="margin: 0;">-<span id="LC273" class="line" lang="python">        <span class="n" style="color: #333;">new</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;"><span class="idiff left">symbol</span></span><span class="p"><span class="idiff right">.</span></span><span class="n" style="color: #333;">Dummy</span><span class="p">.</span><span class="n" style="color: #333;">__new__</span><span class="p">(</span><span class="n" style="color: #333;">cls</span><span class="p">,</span> <span class="n" style="color: #333;">name</span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC273" class="line" lang="python">        <span class="n" style="color: #333;">new</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;">Dummy</span><span class="p">.</span><span class="n" style="color: #333;">__new__</span><span class="p">(</span><span class="n" style="color: #333;">cls</span><span class="p">,</span> <span class="n" style="color: #333;">name</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC274" class="line" lang="python">        <span class="n" style="color: #333;">new</span><span class="p">.</span><span class="n" style="color: #333;">_term</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">term</span></span>

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<pre style="margin: 0;"> <span id="LC275" class="line" lang="python">        <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">new</span></span>

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<pre style="margin: 0;"> <span id="LC276" class="line" lang="python"></span>

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<li id="df73b6ab5b4705b1471df1110ca013209edb0fca">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#df73b6ab5b4705b1471df1110ca013209edb0fca"><strong>nipy/algorithms/statistics/rft.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,7 +20,10 @@ import numpy as np</td>

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<td class="diff-line-num old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.linalg</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">pinv</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

21

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<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

21

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">stats</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC23" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

23

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC24" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

25

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

26

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC26" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.special</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

24

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<td class="diff-line-num new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

27

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.special</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">gamma</span><span class="p">,</span> <span class="n" style="color: #333;">gammaln</span><span class="p">,</span> <span class="n" style="color: #333;">beta</span><span class="p">,</span> <span class="n" style="color: #333;">hermitenorm</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

25

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<td class="diff-line-num new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

26

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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Legacy repr printing from numpy.</span></span>

</pre>

</td>

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<br>

</li>

<li id="a8a713e23006a8e0aa642cb63629c8e7400a35f2">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#a8a713e23006a8e0aa642cb63629c8e7400a35f2"><strong>nipy/algorithms/statistics/tests/test_rft.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,7 +6,10 @@ import numpy as np</td>

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<td class="diff-line-num old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<td class="diff-line-num new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

6

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.special</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">gammaln</span><span class="p">,</span> <span class="n" style="color: #333;">hermitenorm</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

8

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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">scipy.stats</span></span>

</pre>

</td>

</tr>

<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

9

</td>

<td class="diff-line-num new_line old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

</td>

<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

9

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC9" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

10

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.special</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">factorial</span></span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">..</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">rft</span></span>

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"></span>

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<li id="30180d9268bc47b27bdd6483385e26292ffd312f">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#30180d9268bc47b27bdd6483385e26292ffd312f"><strong>nipy/fixes/numpy/testing/nosetester.py</strong></a>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,7 +21,7 @@ def get_package_name(filepath):</td>

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python"><span class="s" style="color: #d14;">    Examples</span></span>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"><span class="s" style="color: #d14;">    --------</span></span>

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<pre style="margin: 0;">-<span id="LC24" class="line" lang="python"><span class="s" style="color: #d14;">    >>> <span class="idiff left right">np.testing.nosetester.</span>get_package_name('nonsense')</span></span>

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"><span class="s" style="color: #d14;">    >>> get_package_name('nonsense')</span></span>

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"><span class="s" style="color: #d14;">    'numpy'</span></span>

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"><span class="s" style="color: #d14;">    """</span></span>

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</li>

<li id="02e24cb6071e7e152b44a994fcbaf6d027c0d745">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#02e24cb6071e7e152b44a994fcbaf6d027c0d745"><strong>nipy/info.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,10 +7,10 @@ docs.  In setup.py in particular, we exec this file, so it cannot import nipy</td>

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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># full release.  '.dev' as a _version_extra string means this is a development</span></span>

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># version</span></span>

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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"><span class="n" style="color: #333;">_version_major</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>

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<pre style="margin: 0;">-<span id="LC10" class="line" lang="python"><span class="n" style="color: #333;">_version_minor</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;"><span class="idiff left right">4</span></span></span>

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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"><span class="n" style="color: #333;">_version_micro</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;"><span class="idiff left right">2</span></span></span>

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<pre style="margin: 0;">-<span id="LC12" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"><span class="idiff left right"># </span>_version_extra = '.dev' # For development</span></span>

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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python"><span class="n" style="color: #333;">_version_extra</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">''</span> <span class="c1" style="color: #998; font-style: italic;"># For release</span></span>

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python"><span class="n" style="color: #333;">_version_minor</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;"><span class="idiff left right">5</span></span></span>

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="n" style="color: #333;">_version_micro</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span></span>

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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python"><span class="n" style="color: #333;">_version_extra</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'.dev'</span> <span class="c1" style="color: #998; font-style: italic;"># For development</span></span>

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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"><span class="idiff left right">#</span>_version_extra = '' # For release</span></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Format expected by setup.py and doc/source/conf.py: string of form "X.Y.Z"</span></span>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="n" style="color: #333;">__version__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"%s.%s.%s%s"</span> <span class="o" style="font-weight: 600;">%</span> <span class="p">(</span><span class="n" style="color: #333;">_version_major</span><span class="p">,</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -170,7 +170,7 @@ MINOR               = _version_minor</td>

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<pre style="margin: 0;"> <span id="LC170" class="line" lang="python"><span class="n" style="color: #333;">MICRO</span>               <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_version_micro</span></span>

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<pre style="margin: 0;"> <span id="LC171" class="line" lang="python"><span class="n" style="color: #333;">ISRELEASE</span>           <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_version_extra</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">''</span></span>

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<pre style="margin: 0;"> <span id="LC172" class="line" lang="python"><span class="n" style="color: #333;">VERSION</span>             <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">__version__</span></span>

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<pre style="margin: 0;">-<span id="LC173" class="line" lang="python"><span class="n" style="color: #333;">REQUIRES</span>            <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="s" style="color: #d14;">"numpy"</span><span class="p">,</span> <span class="s" style="color: #d14;">"scipy"</span><span class="p">,</span> <span class="s" style="color: #d14;">"sympy"</span><span class="p">,</span> <span class="s" style="color: #d14;">"nibabel"</span><span class="p">]</span></span>

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<pre style="margin: 0;">+<span id="LC173" class="line" lang="python"><span class="n" style="color: #333;">REQUIRES</span>            <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="s" style="color: #d14;">"numpy"</span><span class="p">,</span> <span class="s" style="color: #d14;">"scipy"</span><span class="p">,</span> <span class="s" style="color: #d14;">"sympy<span class="idiff left right">(<1.6)</span>"</span><span class="p">,</span> <span class="s" style="color: #d14;">"nibabel"</span><span class="p">]</span></span>

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<pre style="margin: 0;"> <span id="LC174" class="line" lang="python"><span class="n" style="color: #333;">STATUS</span>              <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'beta'</span></span>

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<pre style="margin: 0;"> <span id="LC175" class="line" lang="python"></span>

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<td class="diff-line-num old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC176" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Versions and locations of optional data packages</span></span>

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<li id="6998b22c2555d5c76e76509aef7c3d2ac55721e3">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#6998b22c2555d5c76e76509aef7c3d2ac55721e3"><strong>nipy/labs/group/permutation_test.py</strong></a>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,7 +6,10 @@ from __future__ import print_function, absolute_import</td>

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Third-party imports</span></span>

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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">np</span></span>

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<td class="diff-line-num new_line old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">sm</span></span>

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<td class="diff-line-num new old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.misc</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">comb</span></span>

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">scipy.special</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">comb</span></span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">warnings</span></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Our own imports</span></span>

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<pre style="margin: 0;"> <span id="LC377" class="line" lang="python">        <span class="k" style="font-weight: 600;">elif</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">nsamples</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">2</span><span class="p">:</span></span>

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<pre style="margin: 0;"> <span id="LC378" class="line" lang="python">            <span class="n" style="color: #333;">n1</span><span class="p">,</span><span class="n" style="color: #333;">p</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">data1</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">axis</span><span class="p">],</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">data1</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="mi" style="color: #099;">1</span><span class="o" style="font-weight: 600;">-</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">axis</span><span class="p">]</span></span>

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<pre style="margin: 0;"> <span id="LC379" class="line" lang="python">            <span class="n" style="color: #333;">n2</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">data2</span><span class="p">.</span><span class="n" style="color: #333;">shape</span><span class="p">[</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">axis</span><span class="p">]</span></span>

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<pre style="margin: 0;">-<span id="LC377" class="line" lang="python">            <span class="n" style="color: #333;">max_nperms</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left">sm</span></span><span class="p"><span class="idiff right">.</span></span><span class="n" style="color: #333;">comb</span><span class="p">(</span><span class="n" style="color: #333;">n1</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">n2</span><span class="p">,</span><span class="n" style="color: #333;">n1</span><span class="p">,</span><span class="n" style="color: #333;">exact</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC380" class="line" lang="python">            <span class="n" style="color: #333;">max_nperms</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">comb</span><span class="p">(</span><span class="n" style="color: #333;">n1</span><span class="o" style="font-weight: 600;">+</span><span class="n" style="color: #333;">n2</span><span class="p">,</span><span class="n" style="color: #333;">n1</span><span class="p">,</span><span class="n" style="color: #333;">exact</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC381" class="line" lang="python">            <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">concatenate</span><span class="p">((</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">data1</span><span class="p">,</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">data2</span><span class="p">),</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">axis</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC382" class="line" lang="python">            <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">vardata1</span> <span class="ow" style="font-weight: 600;">is</span> <span class="ow" style="font-weight: 600;">not</span> <span class="bp" style="color: #999;">None</span><span class="p">:</span></span>

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<pre style="margin: 0;"> <span id="LC383" class="line" lang="python">                <span class="n" style="color: #333;">vardata</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">concatenate</span><span class="p">((</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">vardata1</span><span class="p">,</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">vardata2</span><span class="p">),</span> <span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">axis</span><span class="p">)</span></span>

</pre>

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<br>

</li>

<li id="077e7e41c4a704129dc6da286109b5e3bd2d7836">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#077e7e41c4a704129dc6da286109b5e3bd2d7836"><strong>nipy/labs/viz_tools/test/test_activation_maps.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,7 +10,7 @@ from nipy.testing.decorators import skipif</td>

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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">mp</span></span>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Make really sure that we don't try to open an Xserver connection.</span></span>

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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,7 +28,7 @@ from ..anat_cache import mni_sform, _AnatCache</td>

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_demo_plot_map</span><span class="p">():</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># This is only a smoke test</span></span>

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<pre style="margin: 0;">-<span id="LC31" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC31" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC33" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python">    <span class="n" style="color: #333;">demo_plot_map</span><span class="p">()</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -38,7 +38,7 @@ def test_demo_plot_map():</td>

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<td class="diff-line-num old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python"></span>

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<td class="diff-line-num old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_plot_anat</span><span class="p">():</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC40" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># This is only a smoke test</span></span>

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<td class="diff-line-num old old_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC41" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<td class="diff-line-num old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC42" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC43" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC44" class="line" lang="python">    <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">zeros</span><span class="p">((</span><span class="mi" style="color: #099;">20</span><span class="p">,</span> <span class="mi" style="color: #099;">20</span><span class="p">,</span> <span class="mi" style="color: #099;">20</span><span class="p">))</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -85,7 +85,7 @@ def test_plot_map_empty():</td>

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<td class="diff-line-num old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC85" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Test that things don't crash when we give a map with nothing above</span></span>

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<td class="diff-line-num old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC86" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># threshold</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC87" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># This is only a smoke test</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC88" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC88" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC89" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

90

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<td class="diff-line-num new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC90" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC91" class="line" lang="python">    <span class="n" style="color: #333;">data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">np</span><span class="p">.</span><span class="n" style="color: #333;">zeros</span><span class="p">((</span><span class="mi" style="color: #099;">20</span><span class="p">,</span> <span class="mi" style="color: #099;">20</span><span class="p">,</span> <span class="mi" style="color: #099;">20</span><span class="p">))</span></span>

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<br>

</li>

<li id="50321e58064fb57b5e80ebaa6afa8424c9a39ec8">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#50321e58064fb57b5e80ebaa6afa8424c9a39ec8"><strong>nipy/labs/viz_tools/test/test_cm.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,7 @@ from nose import SkipTest</td>

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">mp</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Make really sure that we don't try to open an Xserver connection.</span></span>

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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

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<td class="diff-line-num old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,14 +19,14 @@ from ..cm import dim_cmap, replace_inside</td>

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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC19" class="line" lang="python"></span>

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<td class="diff-line-num old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_dim_cmap</span><span class="p">():</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># This is only a smoke test</span></span>

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<td class="diff-line-num old old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC22" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

24

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<td class="diff-line-num new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python">    <span class="n" style="color: #333;">dim_cmap</span><span class="p">(</span><span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">cm</span><span class="p">.</span><span class="n" style="color: #333;">jet</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

26

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

27

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_replace_inside</span><span class="p">():</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># This is only a smoke test</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC29" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python">    <span class="n" style="color: #333;">replace_inside</span><span class="p">(</span><span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">cm</span><span class="p">.</span><span class="n" style="color: #333;">jet</span><span class="p">,</span> <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">cm</span><span class="p">.</span><span class="n" style="color: #333;">hsv</span><span class="p">,</span> <span class="p">.</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="p">.</span><span class="mi" style="color: #099;">8</span><span class="p">)</span></span>

</pre>

</td>

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<br>

</li>

<li id="4d740eee588a77c8372ab7e44489bd6157a546cd">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#4d740eee588a77c8372ab7e44489bd6157a546cd"><strong>nipy/labs/viz_tools/test/test_slicers.py</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,7 +7,7 @@ import nose</td>

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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">mp</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># Make really sure that we don't try to open an Xserver connection.</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC10" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -25,7 +25,7 @@ def test_demo_ortho_slicer():</td>

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<td class="diff-line-num old_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># conditioned on presence of MNI templated</span></span>

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<td class="diff-line-num old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python">    <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">find_mni_template</span><span class="p">():</span></span>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python">        <span class="k" style="font-weight: 600;">raise</span> <span class="n" style="color: #333;">nose</span><span class="p">.</span><span class="n" style="color: #333;">SkipTest</span><span class="p">(</span><span class="s" style="color: #d14;">"MNI Template is absent for the smoke test"</span><span class="p">)</span></span>

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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python">    <span class="n" style="color: #333;">mp</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pylab</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pl</span></span>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python">    <span class="n" style="color: #333;">pl</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'svg'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python">    <span class="n" style="color: #333;">demo_ortho_slicer</span><span class="p">()</span></span>

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<br>

</li>

<li id="d7cd99190433490dbdb030f61ab1b87b9e623d3d">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#d7cd99190433490dbdb030f61ab1b87b9e623d3d"><strong>nipy/modalities/fmri/tests/test_aliases.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,7 +44,7 @@ def test_implemented_function():</td>

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<pre style="margin: 0;"> <span id="LC44" class="line" lang="python">    <span class="n" style="color: #333;">func</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">sympy</span><span class="p">.</span><span class="n" style="color: #333;">Function</span><span class="p">(</span><span class="s" style="color: #d14;">'myfunc'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC45" class="line" lang="python">    <span class="n" style="color: #333;">assert_false</span><span class="p">(</span><span class="nb" style="color: #0086b3;">hasattr</span><span class="p">(</span><span class="n" style="color: #333;">func</span><span class="p">,</span> <span class="s" style="color: #d14;">'_imp_'</span><span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC46" class="line" lang="python">    <span class="n" style="color: #333;">f</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">implemented_function</span><span class="p">(</span><span class="n" style="color: #333;">func</span><span class="p">,</span> <span class="k" style="font-weight: 600;">lambda</span> <span class="n" style="color: #333;">x</span><span class="p">:</span> <span class="mi" style="color: #099;">2</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">x</span><span class="p">)</span></span>

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<pre style="margin: 0;">-<span id="LC47" class="line" lang="python">    <span class="n" style="color: #333;">assert_true</span><span class="p">(</span><span class="nb" style="color: #0086b3;">hasattr</span><span class="p">(</span><span class="n" style="color: #333;">f<span class="idiff left right">unc</span></span><span class="p">,</span> <span class="s" style="color: #d14;">'_imp_'</span><span class="p">))</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC47" class="line" lang="python">    <span class="n" style="color: #333;">assert_true</span><span class="p">(</span><span class="nb" style="color: #0086b3;">hasattr</span><span class="p">(</span><span class="n" style="color: #333;">f</span><span class="p">,</span> <span class="s" style="color: #d14;">'_imp_'</span><span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC48" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC49" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC50" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_lambdify</span><span class="p">():</span></span>

</pre>

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</li>

<li id="0d0f6da56b01941bca2a4c9da35656ebb52e4277">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#0d0f6da56b01941bca2a4c9da35656ebb52e4277"><strong>nipy/testing/__init__.py</strong></a>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -36,6 +36,13 @@ funcfile = os.path.join(basedir, 'functional.nii.gz')</td>

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<pre style="margin: 0;"> <span id="LC36" class="line" lang="python"><span class="n" style="color: #333;">anatfile</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">os</span><span class="p">.</span><span class="n" style="color: #333;">path</span><span class="p">.</span><span class="n" style="color: #333;">join</span><span class="p">(</span><span class="n" style="color: #333;">basedir</span><span class="p">,</span> <span class="s" style="color: #d14;">'anatomical.nii.gz'</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC37" class="line" lang="python"></span>

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<td class="diff-line-num old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="o" style="font-weight: 600;">*</span></span>

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<pre style="margin: 0;">+<span id="LC39" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Re import decorators/dec depending on numpy's version</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">decorators</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC42" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC43" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">dec</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python">    <span class="n" style="color: #333;">decorators</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dec</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC45" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC46" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Overwrites numpy.testing.Tester</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC47" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">.nosetester</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">NipyNoseTester</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">Tester</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC48" class="line" lang="python"><span class="n" style="color: #333;">test</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">Tester</span><span class="p">().</span><span class="n" style="color: #333;">test</span></span>

</pre>

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<br>

</li>

<li id="9fbc31cd508aecc4dc6ce4cad9dda275d08d959a">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#9fbc31cd508aecc4dc6ce4cad9dda275d08d959a"><strong>nipy/testing/decorators.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,10 @@ dependency on nose.</td>

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8

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">__future__</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">print_function</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">__future__</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">absolute_import</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

10

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<td class="diff-line-num new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

10

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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

11

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<td class="diff-line-num new_line old" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing.decorators</span> <span class="kn" style="font-weight: 600;">import</span> <span class="o" style="font-weight: 600;">*</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC12" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing.decorators</span> <span class="kn" style="font-weight: 600;">import</span> <span class="o" style="font-weight: 600;">*</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing._private.decorators</span> <span class="kn" style="font-weight: 600;">import</span> <span class="o" style="font-weight: 600;">*</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nipy.utils</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">templates</span><span class="p">,</span> <span class="n" style="color: #333;">example_data</span><span class="p">,</span> <span class="n" style="color: #333;">DataError</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -124,7 +127,7 @@ def needs_mpl_agg(func):</td>

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<pre style="margin: 0;"> <span id="LC127" class="line" lang="python">    <span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">matplotlib.pyplot</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">plt</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC128" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nose.tools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">make_decorator</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC129" class="line" lang="python">    <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">agg_func</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">):</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC127" class="line" lang="python">        <span class="n" style="color: #333;">matplotlib</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'agg'</span><span class="p"><span class="idiff left">,</span></span><span class="idiff"> </span><span class="n" style="color: #333;"><span class="idiff">warn</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="bp" style="color: #999;"><span class="idiff right">False</span></span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC130" class="line" lang="python">        <span class="n" style="color: #333;">matplotlib</span><span class="p">.</span><span class="n" style="color: #333;">use</span><span class="p">(</span><span class="s" style="color: #d14;">'agg'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC131" class="line" lang="python">        <span class="n" style="color: #333;">plt</span><span class="p">.</span><span class="n" style="color: #333;">switch_backend</span><span class="p">(</span><span class="s" style="color: #d14;">'agg'</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC132" class="line" lang="python">        <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">func</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">kwargs</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC133" class="line" lang="python">    <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">make_decorator</span><span class="p">(</span><span class="n" style="color: #333;">func</span><span class="p">)(</span><span class="n" style="color: #333;">agg_func</span><span class="p">)</span></span></pre>

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<li id="e3204e5e466f326b9f2e32a6790b1397eacc0018">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#e3204e5e466f326b9f2e32a6790b1397eacc0018"><strong>nipy/tests/test_scripts.py</strong></a>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,7 +19,13 @@ from nipy.core.api import rollimg</td>

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<pre style="margin: 0;"> <span id="LC19" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nose.tools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">assert_true</span><span class="p">,</span> <span class="n" style="color: #333;">assert_false</span><span class="p">,</span> <span class="n" style="color: #333;">assert_equal</span><span class="p">,</span> <span class="n" style="color: #333;">assert_raises</span></span>

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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">..testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">funcfile</span></span>

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<pre style="margin: 0;">-<span id="LC22" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">decorators</span><span class="p">,</span> <span class="n" style="color: #333;">assert_almost_equal</span></span>

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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">assert_almost_equal</span></span>

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<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"></span>

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<td class="diff-line-num new old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"><span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<td class="diff-line-num new old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">decorators</span></span>

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"><span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">ImportError</span><span class="p">:</span></span>

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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python">    <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">numpy.testing</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">dec</span></span>

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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python">    <span class="n" style="color: #333;">decorators</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">dec</span></span>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">nipy.testing.decorators</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">make_label_dec</span></span>

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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"></span>

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</li>

<li id="19359a61ae2446b51b549167b014da2fcf265768">

<a href="https://salsa.debian.org/med-team/nipy/-/commit/4325c2ec656e51a1f09688c9d5497d925cb356bc#19359a61ae2446b51b549167b014da2fcf265768"><strong>requirements.txt</strong></a>

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># See nipy/info.py for requirement definitions</span>

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/numpy" rel="nofollow noreferrer noopener" target="_blank">numpy</a>>=1.6.0</span>

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/scipy" rel="nofollow noreferrer noopener" target="_blank">scipy</a>>=0.9.0</span>

</pre>

</td>

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<tr class="line_holder old" id="" style="line-height: 1.6;">

<td class="diff-line-num old old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

4

</td>

<td class="diff-line-num new_line old" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/sympy" rel="nofollow noreferrer noopener" target="_blank">sympy</a>>=0.7.0</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/sympy" rel="nofollow noreferrer noopener" target="_blank">sympy</a>>=0.7.0<span class="idiff left right">,<1.6</span></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

</td>

<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"><a href="https://pypi.python.org/pypi/nibabel" rel="nofollow noreferrer noopener" target="_blank">nibabel</a>>=1.2.0</span></pre>

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