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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/murasaki">Debian Med / murasaki</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/murasaki/-/commit/e5546c7e9056c00b6c46c3a2d757f8f7354139c2">e5546c7e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-18T09:55:40+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Skip problematic test on armhf since it results in "Bus error"
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/murasaki/-/commit/0400e97ec5c63663fd0a7b0980fbc79be72cc396">0400e97e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-18T09:56:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/murasaki/-/commit/2859cab79f945972288bb38920c9fff94f062567">2859cab7</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-18T09:56:50+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update renamed lintian tag names in lintian overrides.
Changes-By: lintian-brush
Fixes: lintian: renamed-tag
See-also: https://lintian.debian.org/tags/renamed-tag.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/murasaki/-/commit/ae1dc07edcf0968f7359c02e93fc6c0d735a1bc4">ae1dc07e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-18T09:56:57+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: watch file standard 4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/murasaki/-/commit/a86543eea476029cd926875dca1f42a01cdbc6b0">a86543ee</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-12-18T10:03:43+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
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<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#19f8ae538c92aff13d219fe3ee1e4643c30ddad9">
debian/murasaki-common.lintian-overrides
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<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
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<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/murasaki/-/compare/c7be56a63811e1fbce3e3d548d675905ce4f09ba...a86543eea476029cd926875dca1f42a01cdbc6b0#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">murasaki (1.68.6-11) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Skip problematic test on armhf since it results in "Bus error"</span>
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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Closes: #977621</span>
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<td class="diff-line-num new new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Standards-Version: 4.5.1 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Update renamed lintian tag names in lintian overrides.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * watch file standard 4 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 18 Dec 2020 09:56:58 +0100</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">murasaki (1.68.6-10) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> * Team Upload.</span>
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<a href="https://salsa.debian.org/med-team/murasaki/-/compare/c7be56a63811e1fbce3e3d548d675905ce4f09ba...a86543eea476029cd926875dca1f42a01cdbc6b0#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,7 +12,7 @@ Build-Depends: debhelper-compat (= 13),</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">libcrypto</span><span class="p">++-</span><span class="n" style="color: #333;">dev</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">libpstreams</span><span class="p">-</span><span class="n" style="color: #333;">dev</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="mosel"> <span class="n" style="color: #333;">libopenmpi</span><span class="p">-</span><span class="n" style="color: #333;">dev</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="mosel"><span class="n" style="color: #333;">Standards</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">4.5.<span class="idiff left right">0</span></span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="mosel"><span class="n" style="color: #333;">Standards</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">4.5.<span class="idiff left right">1</span></span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Browser</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">salsa</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">med</span><span class="p">-</span><span class="n" style="color: #333;">team</span><span class="p">/</span><span class="n" style="color: #333;">murasaki</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Git</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">salsa</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">med</span><span class="p">-</span><span class="n" style="color: #333;">team</span><span class="p">/</span><span class="n" style="color: #333;">murasaki</span><span class="p">.</span><span class="n" style="color: #333;">git</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">http</span><span class="p">://</span><span class="n" style="color: #333;">murasaki</span><span class="p">.</span><span class="n" style="color: #333;">dna</span><span class="p">.</span><span class="n" style="color: #333;">bio</span><span class="p">.</span><span class="n" style="color: #333;">keio</span><span class="p">.</span><span class="n" style="color: #333;">ac</span><span class="p">.</span><span class="n" style="color: #333;">jp</span><span class="p">/</span><span class="n" style="color: #333;">wiki</span><span class="p">/</span></span>
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<a href="https://salsa.debian.org/med-team/murasaki/-/compare/c7be56a63811e1fbce3e3d548d675905ce4f09ba...a86543eea476029cd926875dca1f42a01cdbc6b0#19f8ae538c92aff13d219fe3ee1e4643c30ddad9"><strong>debian/murasaki-common.lintian-overrides</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext"># Binaries share common manpages</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">murasaki-common: <span class="idiff left right">manpage-without-executabl</span>e *</span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">murasaki-common: <span class="idiff left right">spare-manual-pag</span>e *</span></pre>
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<a href="https://salsa.debian.org/med-team/murasaki/-/compare/c7be56a63811e1fbce3e3d548d675905ce4f09ba...a86543eea476029cd926875dca1f42a01cdbc6b0#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -27,11 +27,14 @@ do</td>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="shell"> <span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"PASSED GENEPARSE"</span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="shell"> <span class="nb" style="color: #0086b3;">echo</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="shell"><span class="nb" style="color: #0086b3;"> </span><span class="k" style="font-weight: 600;">if</span> <span class="o" style="font-weight: 600;">[</span> <span class="si" style="color: #d14;">$(</span>dpkg-architecture <span class="nt" style="color: #000080;">-qDEB_HOST_ARCH</span><span class="si" style="color: #d14;">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="s2" style="color: #d14;">"armhf"</span> <span class="o" style="font-weight: 600;">]</span> <span class="k" style="font-weight: 600;">then</span></span>
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<td class="diff-line-num new new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="shell"><span class="k" style="font-weight: 600;"> </span><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"Skip Testing mbfa on </span><span class="nv" style="color: #008080;">$f</span><span class="s2" style="color: #d14;"> (see bug #977621)"</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="shell"> <span class="k" style="font-weight: 600;">else</span></span>
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<td class="diff-line-num new_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="shell"><span class="k" style="font-weight: 600;"> </span><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"Testing mbfa on </span><span class="nv" style="color: #008080;">$f</span><span class="s2" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="shell"> mbfa <span class="nv" style="color: #008080;">$f</span> <span class="nt" style="color: #000080;">--fasta</span> <span class="o" style="font-weight: 600;">></span> testfile</span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="shell"> <span class="nb" style="color: #0086b3;">echo</span> <span class="s1" style="color: #d14;">'PASSED mbfa'</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="shell"> <span class="k" style="font-weight: 600;">fi</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="shell"><span class="k" style="font-weight: 600;"> </span><span class="nb" style="color: #0086b3;">echo</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="shell"><span class="k" style="font-weight: 600;">done</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s1" style="color: #d14;">'PASS!'</span></span></pre>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="shell"></span></pre>
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<a href="https://salsa.debian.org/med-team/murasaki/-/compare/c7be56a63811e1fbce3e3d548d675905ce4f09ba...a86543eea476029cd926875dca1f42a01cdbc6b0#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">version=<span class="idiff left right">3</span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">version=<span class="idiff left right">4</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">http://sf.net/murasaki/murasaki-src-(\d[\d\.]+)\.(?:tgz|tbz|txz|(?:tar\.(?:gz|bz2|xz)))</span></pre>
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