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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/rna-star">Debian Med / rna-star</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/1c0249b79825cca193ff82abee4f8c9b1fbaa176">1c0249b7</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:27:42+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/dae04ba49943fa90a9590b6e6fe620eff36edb2e">dae04ba4</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:27:43+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.7.7a+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/e6929776f7c9993d0c543dc8910c03a4fe4643fb">e6929776</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:27:45+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.7.7a+dfsg'
Update to upstream version '2.7.7a+dfsg'
with Debian dir fa00a27c9c92e73f9ad76ca05e09f28f93cae5c5</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/d55341cc740ce07014799463f81466a58b48ef92">d55341cc</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:27:45+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/cf39b196d4a17129b5f963b1e7aff9375bee842b">cf39b196</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:35:17+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add myself to uploaders
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/7f606e59729d2ded7991320d3f7b0c4505d1043c">7f606e59</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:35:42+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Switch watch version to 4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/b3cf6300b1a75d5fcada52b38ae945dd05a67a01">b3cf6300</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:36:16+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update changelog
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e">
CHANGES.md
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#fb1b39277cfb15327cea71551d0bbf7643e216f4">
RELEASEnotes.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#1d6ebb42152a3125296c8f3df8bc34651da72448">
doc/STARmanual.pdf
</a>
</li>
<li class="file-stats">
<a href="#593420cfcb634b93ff691be9fd7e3acced8a8616">
<span class="new-file">
+
docs/STARconsensus.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#0e92e2511c1a55ce1db2a846d4399f9fe68a71fe">
docs/STARsolo.md
</a>
</li>
<li class="file-stats">
<a href="#5a5668ccb427693fe0e7ea2e054229206cb91b0a">
extras/doc-latex/STARmanual.tex
</a>
</li>
<li class="file-stats">
<a href="#dd357fd519066773532862e75ebb9276945c8fe5">
extras/doc-latex/parametersDefault.tex
</a>
</li>
<li class="file-stats">
<a href="#8955c7301dc01c7f9b2a350f2aee6066e91f8f83">
extras/docker/Dockerfile
</a>
</li>
<li class="file-stats">
<a href="#1e5b4c1f1f6aa726b81044bc456a57d6b5ae614b">
source/BAMbinSortByCoordinate.cpp
</a>
</li>
<li class="file-stats">
<a href="#2ae4914dbcb1efeb17d11c457772c8c2308eb7c1">
source/BAMbinSortUnmapped.cpp
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</li>
<li class="file-stats">
<a href="#836ceb88a596b10c7fb50d8a95ca462dc35804a4">
source/BAMbinSortUnmapped.h
</a>
</li>
<li class="file-stats">
<a href="#f9b6ce4365fb948fbfeb192ecf1c9d66509b25f8">
source/GTF_transcriptGeneSJ.cpp
</a>
</li>
<li class="file-stats">
<a href="#3b3dcc63f931c5db1862b61467a733972f52de53">
source/Genome.h
</a>
</li>
<li class="file-stats">
<a href="#df6e5318de1db41d7b70e60dc90b4554d8617517">
<span class="deleted-file">
−
source/Genome_consensusSequence.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f4eb1c9c89d8a6664c03d29afd21f3104689a8d9">
source/Genome_genomeGenerate.cpp
</a>
</li>
<li class="file-stats">
<a href="#77469917c7cbec74192432275f019febe4347b45">
source/Genome_genomeLoad.cpp
</a>
</li>
<li class="file-stats">
<a href="#f92a228047dbe8cecebb55eb8b29e013111c665e">
source/Genome_genomeOutLoad.cpp
</a>
</li>
<li class="file-stats">
<a href="#ad138d9fb2abab45568bfc7dd50dcf620e7bbf44">
source/Genome_transformGenome.cpp
</a>
</li>
<li class="file-stats">
<a href="#a0b6c92785c5892df94b89d21ead0dc460541d74">
source/IncludeDefine.h
</a>
</li>
<li class="file-stats">
<a href="#6ae9e88712056a2abd55911f4d3a7d8b8145819c">
source/Makefile
</a>
</li>
<li class="file-stats">
<a href="#8446bcce87bc8a78f6d2ffabef5990a854c1c29b">
source/OutSJ.cpp
</a>
</li>
<li class="file-stats">
<a href="#6e7e9199db44be8b0f606c7c21db10763fc8b0eb">
source/Parameters.cpp
</a>
</li>
<li class="file-stats">
<a href="#726192cc35dd0f29d69e3f961c99b4d6781d40e5">
<span class="new-file">
+
source/ParametersGenome.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#b8fe6a1bb5cb395749f40bf614d7c8d24affefd0">
source/ParametersGenome.h
</a>
</li>
<li class="file-stats">
<a href="#488388fcfa1829288a3e4e4fd9dacf8ed6b8a693">
source/ReadAlign.cpp
</a>
</li>
<li class="file-stats">
<a href="#238ae46f3e2ae6c05a1eca3f159a54222230394e">
source/ReadAlign.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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