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<h3>
Nilesh Patra pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/rna-star">Debian Med / rna-star</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/-/commit/dae04ba49943fa90a9590b6e6fe620eff36edb2e">dae04ba4</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-06T16:27:43+05:30</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.7.7a+dfsg</pre>
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<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e">
CHANGES.md
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#fb1b39277cfb15327cea71551d0bbf7643e216f4">
RELEASEnotes.md
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<li class="file-stats">
<a href="#1d6ebb42152a3125296c8f3df8bc34651da72448">
doc/STARmanual.pdf
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<li class="file-stats">
<a href="#593420cfcb634b93ff691be9fd7e3acced8a8616">
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docs/STARconsensus.md
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<li class="file-stats">
<a href="#0e92e2511c1a55ce1db2a846d4399f9fe68a71fe">
docs/STARsolo.md
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<li class="file-stats">
<a href="#5a5668ccb427693fe0e7ea2e054229206cb91b0a">
extras/doc-latex/STARmanual.tex
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<li class="file-stats">
<a href="#dd357fd519066773532862e75ebb9276945c8fe5">
extras/doc-latex/parametersDefault.tex
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<li class="file-stats">
<a href="#8955c7301dc01c7f9b2a350f2aee6066e91f8f83">
extras/docker/Dockerfile
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<li class="file-stats">
<a href="#1e5b4c1f1f6aa726b81044bc456a57d6b5ae614b">
source/BAMbinSortByCoordinate.cpp
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<li class="file-stats">
<a href="#2ae4914dbcb1efeb17d11c457772c8c2308eb7c1">
source/BAMbinSortUnmapped.cpp
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<a href="#836ceb88a596b10c7fb50d8a95ca462dc35804a4">
source/BAMbinSortUnmapped.h
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<li class="file-stats">
<a href="#f9b6ce4365fb948fbfeb192ecf1c9d66509b25f8">
source/GTF_transcriptGeneSJ.cpp
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<li class="file-stats">
<a href="#3b3dcc63f931c5db1862b61467a733972f52de53">
source/Genome.h
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<a href="#df6e5318de1db41d7b70e60dc90b4554d8617517">
<span class="deleted-file">
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source/Genome_consensusSequence.cpp
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<li class="file-stats">
<a href="#f4eb1c9c89d8a6664c03d29afd21f3104689a8d9">
source/Genome_genomeGenerate.cpp
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<li class="file-stats">
<a href="#77469917c7cbec74192432275f019febe4347b45">
source/Genome_genomeLoad.cpp
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<a href="#f92a228047dbe8cecebb55eb8b29e013111c665e">
source/Genome_genomeOutLoad.cpp
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<li class="file-stats">
<a href="#ad138d9fb2abab45568bfc7dd50dcf620e7bbf44">
source/Genome_transformGenome.cpp
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<li class="file-stats">
<a href="#a0b6c92785c5892df94b89d21ead0dc460541d74">
source/IncludeDefine.h
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<li class="file-stats">
<a href="#6ae9e88712056a2abd55911f4d3a7d8b8145819c">
source/Makefile
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<li class="file-stats">
<a href="#8446bcce87bc8a78f6d2ffabef5990a854c1c29b">
source/OutSJ.cpp
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<li class="file-stats">
<a href="#6e7e9199db44be8b0f606c7c21db10763fc8b0eb">
source/Parameters.cpp
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<li class="file-stats">
<a href="#726192cc35dd0f29d69e3f961c99b4d6781d40e5">
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source/ParametersGenome.cpp
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<li class="file-stats">
<a href="#b8fe6a1bb5cb395749f40bf614d7c8d24affefd0">
source/ParametersGenome.h
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<li class="file-stats">
<a href="#488388fcfa1829288a3e4e4fd9dacf8ed6b8a693">
source/ReadAlign.cpp
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<li class="file-stats">
<a href="#238ae46f3e2ae6c05a1eca3f159a54222230394e">
source/ReadAlign.h
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<li class="file-stats">
<a href="#764c3cfc36fad2f293fd356112b8836ea61e0b02">
source/ReadAlign_alignBAM.cpp
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<li class="file-stats">
<a href="#a56af44883297b5a3e4b3b734134eb8aaebf3fd2">
source/ReadAlign_multMapSelect.cpp
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<li class="file-stats">
<a href="#7d40e1e383dcabfc2f5bedfc1c66033e3b45ac83">
source/ReadAlign_oneRead.cpp
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<h5>The diff was not included because it is too large.</h5>
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