<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">

<h3>
Nilesh Patra pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/python-cutadapt">Debian Med / python-cutadapt</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cutadapt/-/commit/ecd3e1f93dff5b6d0a73a6464064e53738d60d60">ecd3e1f9</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-01-09T16:41:31+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 3.2</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#4990be809a537bf86e4be2fe2e8251c83d8bd129">
CHANGES.rst
</a>
</li>
<li class="file-stats">
<a href="#ee1d7278a009e2c5c652622fe43dc77e39af740d">
doc/guide.rst
</a>
</li>
<li class="file-stats">
<a href="#6677207c6fa30ac9cec19ad036ae842582159ecb">
doc/installation.rst
</a>
</li>
<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
</a>
</li>
<li class="file-stats">
<a href="#babdfe5d368a4907abadce7f9b00dfab2489185a">
src/cutadapt/__main__.py
</a>
</li>
<li class="file-stats">
<a href="#e2f3ad272a713adb85ea4390f45ac899f4ed8623">
src/cutadapt/_align.pyx
</a>
</li>
<li class="file-stats">
<a href="#8fb347891ec0a40b16ef2bdbe361f823e12aa016">
src/cutadapt/adapters.py
</a>
</li>
<li class="file-stats">
<a href="#98e6d8e6e9db700c1f73b5678eae963cb214cbc9">
src/cutadapt/align.py
</a>
</li>
<li class="file-stats">
<a href="#6ed465db6839a69141086c2acf1dc01a8b17a981">
src/cutadapt/filters.py
</a>
</li>
<li class="file-stats">
<a href="#a44086ebe255bc0df91ea1d82811c828e6f5e324">
src/cutadapt/modifiers.py
</a>
</li>
<li class="file-stats">
<a href="#1b86cdea057b59b4d05ba7fde4aea9df4e8fe9e8">
src/cutadapt/pipeline.py
</a>
</li>
<li class="file-stats">
<a href="#0947279ab1fb32f21dde9a563c2b4ca1cd2fc0de">
src/cutadapt/report.py
</a>
</li>
<li class="file-stats">
<a href="#38209ae4133cce102ac19caba31dc42fd0c0617a">
<span class="new-file">
+
src/cutadapt/tokenizer.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#814bf4d134600a18537347295dff80815c58c090">
tests/cut/combinatorial/combinatorial.A_G.1.fasta

tests/cut/combinatorial/combinatorial.A_G.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#34457ae2450c2acc0c81df69199bdf74236c0037">
tests/cut/combinatorial/combinatorial.A_G.2.fasta

tests/cut/combinatorial/combinatorial.A_G.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#06baca0d830e1f6741dd8b5abacf8ab4a96ab7a4">
tests/cut/combinatorial/combinatorial.A_T.1.fasta

tests/cut/combinatorial/combinatorial.A_T.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#c0e97f2767159515ccdede2db94dd276043509fd">
tests/cut/combinatorial/combinatorial.A_T.2.fasta

tests/cut/combinatorial/combinatorial.A_T.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#d1a6c32432325cd44bb55eea9442b51d948ae8fe">
tests/cut/combinatorial/combinatorial.A_unknown.1.fasta

tests/cut/combinatorial/combinatorial.A_unknown.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#b2d93ed43c082318add235126fa092ad76d89250">
tests/cut/combinatorial/combinatorial.A_unknown.2.fasta

tests/cut/combinatorial/combinatorial.A_unknown.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#f5001251846163821d1b260e39e23c7a3556ecc6">
tests/cut/combinatorial/combinatorial.C_G.1.fasta

tests/cut/combinatorial/combinatorial.C_G.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#289eef0fc64496e23ac4468496d30fe7c95c2854">
tests/cut/combinatorial/combinatorial.C_G.2.fasta

tests/cut/combinatorial/combinatorial.C_G.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#8879fb2c60e02246148e146d945fbc71da72fc56">
tests/cut/combinatorial/combinatorial.C_T.1.fasta

tests/cut/combinatorial/combinatorial.C_T.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#4907b285a6f9572762af55082b0f69930d16ee0f">
tests/cut/combinatorial/combinatorial.C_T.2.fasta

tests/cut/combinatorial/combinatorial.C_T.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#0c01e0a87d2b7d116194da0d10d319d0013f1a50">
<span class="new-file">
+
tests/cut/combinatorial/combinatorial.C_unknown.1.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#edab4158e8bd2322d6a28b6b68f08d4852617abb">
<span class="new-file">
+
tests/cut/combinatorial/combinatorial.C_unknown.2.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#fdc62a673533f0058d53db7b11e57936d67e711d">
tests/cut/combinatorial/combinatorial.unknown_G.1.fasta

tests/cut/combinatorial/combinatorial.unknown_G.1.fastq
</a>
</li>
<li class="file-stats">
<a href="#d26a25d513d8a2e5bddb09a61c09b1d60eea6ae5">
tests/cut/combinatorial/combinatorial.unknown_G.2.fasta

tests/cut/combinatorial/combinatorial.unknown_G.2.fastq
</a>
</li>
<li class="file-stats">
<a href="#c04c5bafb4781e379086e1ba2fce4edd204e1077">
<span class="new-file">
+
tests/cut/combinatorial/combinatorial.unknown_T.1.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#e4c575468e3b896fd014ceadc58cccd75aaf23c6">
<span class="new-file">
+
tests/cut/combinatorial/combinatorial.unknown_T.2.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#343a4556a1fbf8ee56e130733e361a1d8469b2c7">
<span class="new-file">
+
tests/cut/combinatorial/combinatorial.unknown_unknown.1.fastq
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">

<br>
<a href="https://salsa.debian.org/med-team/python-cutadapt/-/commit/ecd3e1f93dff5b6d0a73a6464064e53738d60d60">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/python-cutadapt/-/commit/ecd3e1f93dff5b6d0a73a6464064e53738d60d60"}}</script>


</p>
</div>
</body>
</html>