<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">

<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/spades">Debian Med / spades</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/spades/-/commit/ae7e3af424b8c930769804f60871b8b0be828e1c">ae7e3af4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-01-15T10:10:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 3.15.0+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#e0c402299c92f5f06c3846f4a30db2e2435f2e60">
<span class="deleted-file">

.github/workflows/basic.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#592c4fe9ab95ac8c83e1a7e803fbe5a8dc007e97">
<span class="new-file">
+
.github/workflows/basic.yml.disabled
</span>
</a>
</li>
<li class="file-stats">
<a href="#66b7285a3cc46aa651ae6f16746ce4bf4a060a16">
<span class="deleted-file">

.github/workflows/spades-test.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#6049f2543fdb0084b0f7bc8e64a9d51649674c84">
<span class="new-file">
+
.github/workflows/spades-test.yml.disabled
</span>
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#7a8fa6f6b7e40bebb1d275838c6cdeadc10459d8">
assembler/LICENSE
</a>
</li>
<li class="file-stats">
<a href="#ae55101b54ce2616006582a65f21f81a27f56ef0">
assembler/VERSION
</a>
</li>
<li class="file-stats">
<a href="#df0b7ba0f9220b7edf09dcdf97a4ca6ebf7ec564">
assembler/biosynthetic_spades_hmms/AMP.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#3a1f5dbfe0f1d85adea7aa6564bfebf82bee08aa">
assembler/biosynthetic_spades_hmms/AT.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#e3acdc5bf99c63f6145eebaeb7092862e3495e63">
assembler/biosynthetic_spades_hmms/CStart.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#6ab54e3fb7e5892045c0ed466e0712607f861427">
assembler/biosynthetic_spades_hmms/KR.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#b354277170985188bbc4d66da74a4b2521e47990">
assembler/biosynthetic_spades_hmms/KS.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#44b9f2e2be54e001dcfc72aeec5be2b3b29347ac">
assembler/biosynthetic_spades_hmms/TE.hmm.gz
</a>
</li>
<li class="file-stats">
<a href="#a9849095d161d6172a4b8c397180ac07a1c37ec4">
assembler/changelog.html
</a>
</li>
<li class="file-stats">
<a href="#d3699c56c9f03f191514c8ca63c4486f67e7db6e">
<span class="deleted-file">

assembler/configs/cclean/config.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#cc00ff1c24e49fc5c4b3f6e4594e0dbcc0902565">
<span class="deleted-file">

assembler/configs/debruijn/bgc_mode.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#2467163558fc3d4a50c531e961d8ec1c94ae725b">
assembler/configs/debruijn/config.info
</a>
</li>
<li class="file-stats">
<a href="#b9843cadeeafe4a99c0af100edff42352e592fd6">
<span class="new-file">
+
assembler/configs/debruijn/hmm_mode.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#d60c403a3e867c60875c606fb63a6a91d553d25e">
assembler/configs/debruijn/meta_mode.info
</a>
</li>
<li class="file-stats">
<a href="#62a4dc5963538165dd000f4f2be15b3a5f88af68">
<span class="new-file">
+
assembler/configs/debruijn/metaplasmid_mode.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#3a9984c51153750551b233956eee4212271e5c43">
<span class="new-file">
+
assembler/configs/debruijn/metaviral_mode.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#89d2e1f976917a52ffdf59e3a2fa3b55e42b836e">
assembler/configs/debruijn/plasmid_mode.info
</a>
</li>
<li class="file-stats">
<a href="#747e777143acea5ed0ee6e2b2b75f0c893f59146">
<span class="new-file">
+
assembler/configs/debruijn/rnaviral_mode.info
</span>
</a>
</li>
<li class="file-stats">
<a href="#38fe54d2cae212d4494086ae61117b956c51485f">
assembler/configs/debruijn/simplification.info
</a>
</li>
<li class="file-stats">
<a href="#a40b59c80ea4241632800b902b400a827fc03aee">
<span class="new-file">
+
assembler/coronaspades.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#79002802e04f73832594cf736d20ad5167e532bf">
<span class="new-file">
+
assembler/coronaspades_hmms/Pfam-A.SARS-CoV-2.hmm.gz
</span>
</a>
</li>
<li class="file-stats">
<a href="#f67c81ae632042b7801d674de47f17d44a2bebea">
<span class="new-file">
+
assembler/coronaspades_hmms/Phan-CoV.hmm.gz
</span>
</a>
</li>
<li class="file-stats">
<a href="#23c39b5eec4ddddfa2506b5ac0b3a09c1cae7935">
<span class="deleted-file">

assembler/ext/eclipse/gsgc.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#131d908634993289293b8d0e9be198d5e17ee09e">
assembler/ext/include/boomphf/BooPHF.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">

<br>
<a href="https://salsa.debian.org/med-team/spades/-/commit/ae7e3af424b8c930769804f60871b8b0be828e1c">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/spades/-/commit/ae7e3af424b8c930769804f60871b8b0be828e1c"}}</script>


</p>
</div>
</body>
</html>