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<h3>
Juhani Numminen pushed to branch master
at <a href="https://salsa.debian.org/med-team/freebayes">Debian Med / freebayes</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/2c13dbfdb0bd8a678a2f7074dede4b9a82673ed3">2c13dbfd</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T15:50:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/1058f25897e0007e1e42a671d5f766a886c2c7bd">1058f258</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T15:50:11+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.3.3</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/6a7132545ddf278f3f6b96b406cf160660671bcb">6a713254</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T15:50:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.3.3'
Update to upstream version '1.3.3'
with Debian dir c0357d392b07e1b2c38476373d1b3df0a74d5b84</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/ec75605480999f5f031f971423f5ba56fdd6ace2">ec756054</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T15:50:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.5.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/817209e771ec86770b027035606b540a26cec6ba">817209e7</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T17:38:41+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Clean autogenerated test/regression/NA12878.chr22.tiny.vcf
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/bd70be01ccbf9a15c99f4d5dcf8c34160fb7cb6d">bd70be01</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T17:47:23+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Replace Build-Depends cmake with meson and ninja-build
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/d8c73e2ce2eec247417095e376e75e7ad364c169">d8c73e2c</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T17:54:12+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt debian/rules to use the meson build system
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/f272acc9377ce244529fe8415fa642ea7c63fa77">f272acc9</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T18:00:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove debian/install that listed files now installed by the build system
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/1ce3de80a32d1564513bb51b77c0aa052dc64b0d">1ce3de80</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T19:37:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove all pre-existing patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/447c5c10b6f7d3bc905dc1e496c2f77ebedd487a">447c5c10</a></strong>
<div>
<span>by Juhani Numminen</span>
<i>at 2021-01-18T19:38:35+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add libraries.patch to use Debian-provided external libraries in meson
</pre>
</li>
</ul>
<h4>23 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a03585ab89eed5e0782a1875b2d8153b97865d30">
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+
.github/ISSUE_TEMPLATE/bug_report.md
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<a href="#69f0b4e823a65254e03abae9b204d501ac490ca4">
<span class="new-file">
+
.github/workflows/ci_test.yml
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<a href="#15cccd8b26488952388b1cfbc431217e17f1c627">
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.github/workflows/issue-tracker-bot.yaml
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<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
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.github/workflows/main.yml
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<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<a href="#7445606fbf8f3683cd42bdc54b05d7a0bc2dfc44">
.gitmodules
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<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
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CMakeLists.txt
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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
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Makefile
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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RELEASE-NOTES.md
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<a href="#7238f0eb44c3b52d88a8bc9a81fc09e6a15f22af">
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contrib/README.md
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contrib/SeqLib/LICENSE
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<a href="#63f74ebb1e84c6bc62ac88a3945d124fd0ca2d7c">
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contrib/SeqLib/README.md
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<a href="#32a2b21e52daa7aa2f77e15bb68788c87a18bc48">
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contrib/SeqLib/SeqLib/BamHeader.h
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<a href="#7e3baf9d94fda0555758a8c343cb2aeef1f980a1">
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contrib/SeqLib/SeqLib/BamReader.h
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<a href="#2c009691a229bda67e4d0808ae791948c951aff7">
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contrib/SeqLib/SeqLib/BamRecord.h
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<a href="#fc0828ba191ccfa434949d8315d62efb11c5ea8b">
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contrib/SeqLib/SeqLib/BamWalker.h
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<a href="#95be975b81cc8ff65e33bb173b9b2c52d44a4ab8">
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contrib/SeqLib/SeqLib/BamWriter.h
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contrib/SeqLib/SeqLib/GenomicRegion.h
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contrib/SeqLib/SeqLib/GenomicRegionCollection.cpp
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contrib/SeqLib/SeqLib/GenomicRegionCollection.h
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<a href="#6004240e39848b90a08e0b0a1e0d04ef38128418">
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contrib/SeqLib/SeqLib/IntervalTree.h
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</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #666;">
—
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<a href="https://salsa.debian.org/med-team/freebayes/-/compare/d41223e521c0da9835025d4f192ff62c8b2a84d6...447c5c10b6f7d3bc905dc1e496c2f77ebedd487a">View it on GitLab</a>.
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