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GitLab

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<h3>

Étienne Mollier pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/bedtools">Debian Med / bedtools</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/bedtools/-/commit/b6cb18707ce2740c61b513db00a2257da306d25b">b6cb1870</a></strong>

<div>

<span>by Étienne Mollier</span>

<i>at 2021-01-27T15:11:54+01:00</i>

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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.30.0+dfsg</pre>

</li>

</ul>

<h4>30 changed files:</h4>

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<li class="file-stats">

<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">

.github/workflows/main.yml

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<li class="file-stats">

<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">

.gitignore

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<li class="file-stats">

<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">

Makefile

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</li>

<li class="file-stats">

<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">

README.md

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<li class="file-stats">

<a href="#254a2da7a740675e537439eb88e32083b9ea4771">

docs/conf.py

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<li class="file-stats">

<a href="#54af9d69704715c9e558b29bf1304552eed1c05b">

docs/content/advanced-usage.rst

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<li class="file-stats">

<a href="#96546b98f68cd24f5d4aa902aa32da8e1adf5200">

docs/content/general-usage.rst

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<li class="file-stats">

<a href="#7e2c6a8f69d5f4c98b9a6c07bf681f16307a9035">

docs/content/history.rst

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<li class="file-stats">

<a href="#0ad0c9480aebc31dd47d0a136ec23871c6059bca">

docs/content/installation.rst

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<a href="#ab840828f6320aae33b8591bcdd29458c19d478b">

docs/content/tools/getfasta.rst

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<a href="#28b2fd9a9a33cdb4eb07f96b014470014a0c1de6">

docs/content/tools/intersect.rst

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<a href="#3805673d31b88b6f8a1c9baa62056947b510c694">

docs/content/tools/multicov.rst

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<li class="file-stats">

<a href="#0b897f3ead3633587c6b09c9d19cdac0eb2517a5">

src/annotateBed/annotateBed.cpp

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<li class="file-stats">

<a href="#e65646782bea8c8fcf9864b7bd5c8047cc3ab82f">

src/annotateBed/annotateMain.cpp

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<li class="file-stats">

<a href="#6dd5ed69e2042b1d5a311d0f156d323d18bb1fdf">

src/bamToFastq/bamToFastq.cpp

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<li class="file-stats">

<a href="#70abd534673ef8f1c3cbd4aa1569d740e609fe29">

src/bedpeToBam/bedpeToBam.cpp

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<li class="file-stats">

<a href="#6d01d90bf0cd3eaae4e2837c68742f9cf68a47a3">

src/bedtools.cpp

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<li class="file-stats">

<a href="#5273adee83ea252fc53760e8cfe8bd40cac19873">

src/fastaFromBed/fastaFromBed.cpp

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<li class="file-stats">

<a href="#898dc17446790e7f390dcd49b54c263b3ef5ace2">

src/fastaFromBed/fastaFromBed.h

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<li class="file-stats">

<a href="#b9ac1ef5c06f5a687e8270854d96caaa92e7ad12">

src/fastaFromBed/fastaFromBedMain.cpp

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<li class="file-stats">

<a href="#46e7099b4a79f0560a99f24081398e846d42b345">

src/fisher/kfunc.cpp

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<li class="file-stats">

<a href="#792b5f3184486afec28c7b1e66e0562d3c7bd4be">

src/genomeCoverageBed/genomeCoverageBed.cpp

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<li class="file-stats">

<a href="#eb284bdd86cd5f31acd04375cd3ab2f0ed9f013a">

src/genomeCoverageBed/genomeCoverageBed.h

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<li class="file-stats">

<a href="#854ce2d6b44c4b90952979acbd413582ec3a8ec7">

src/genomeCoverageBed/genomeCoverageMain.cpp

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<li class="file-stats">

<a href="#c8c4973070d742d7ffd1a94b5ec102aadedbb953">

<span class="new-file">

+

src/htsutil.cpp

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<li class="file-stats">

<a href="#d55800767c4129d53dd633e9bd0f840594357031">

src/multiBamCov/multiBamCovMain.cpp

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<li class="file-stats">

<a href="#3506f87a5c2030368200d6519a0cc848e0a8c4c3">

src/randomBed/randomBed.cpp

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<li class="file-stats">

<a href="#86388ec25fb33844650fc367bd19e691926b92da">

src/sampleFile/sampleFile.cpp

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<li class="file-stats">

<a href="#390f48dbc06bb3b93394b98f0f883a4e40ca4681">

src/shiftBed/shiftBed.cpp

</a>

</li>

<li class="file-stats">

<a href="#773f5fba36e4fba86c5fd49dd1300f5db7ac64b8">

src/shuffleBed/shuffleBed.cpp

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<h5>The diff was not included because it is too large.</h5>

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