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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9e717b2153dc934e33633862a5aa0eec306022c2">9e717b21</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-06T13:42:19+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9e717b2153dc934e33633862a5aa0eec306022c2#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 06 Feb 2021 <span class="idiff left right">01</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 06 Feb 2021 <span class="idiff left right">13</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> dcmtk | 180 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">5</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 5<span class="idiff left right">2</span> | {laboratory,practice,his,oncology,covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">6</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 5<span class="idiff left right">1</span> | {laboratory,practice,his,oncology,covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> dicom3tools | 34 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">1</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">0</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> amide | 29 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">8</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> htsjdk | 2<span class="idiff left right">6</span> | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope | 24 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> gdcm | 23 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> dcm2niix | 20 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> odin | 1<span class="idiff left right">9</span> | {imaging,imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> nifticlib | 1<span class="idiff left right">8</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> odin | 1<span class="idiff left right">8</span> | {imaging,imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> nifticlib | 1<span class="idiff left right">7</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> plastimatch | 16 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> dicomnifti | 15 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> gnumed-server | 1<span class="idiff left right">4</span> | {covid-19,practice} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> gnumed-server | 1<span class="idiff left right">5</span> | {covid-19,practice} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> minc-tools | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> pixelmed | 13 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> gdcm | 12 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> king | 12 | {imaging,typesetting} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> gdcm | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> openslide | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> adun.app | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> ngs-sdk | 10 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -35,8 +35,6 @@ Last-Update: Sat, 06 Feb 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> mipe | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> multiqc | 8 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> ngs-sdk | 8 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> nifti2dicom | 8 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> prime-phylo | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> biomaj3-cli | 7 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> bio-tradis | 7 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> fastlink | 7 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,8 +42,10 @@ Last-Update: Sat, 06 Feb 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> lagan | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> libncl | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> mauve-aligner | 7 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> nifti2dicom | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> obitools | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> orthanc-webviewer | 7 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> prime-phylo | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> pymia | 7 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> runcircos-gui | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> tracetuner | 7 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="102" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -102,7 +102,6 @@ Last-Update: Sat, 06 Feb 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> orthanc-mysql | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> orthanc-postgresql | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> paraclu | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC105" class="line" lang="plaintext"> pbdagcon | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> phyutility | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> proalign | 4 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> rtax | 4 | {bio,cloud} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -124,6 +123,7 @@ Last-Update: Sat, 06 Feb 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> ipig | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> logol | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> ngs-sdk | 3 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext"> pbdagcon | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="plaintext"> placnet | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> plasmidseeker | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> samblaster | 3 | {covid-19,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -224,8 +224,8 @@ Last-Update: Sat, 06 Feb 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="plaintext"> pbcopper | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="plaintext"> pbseqlib | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> plasmidid | 0 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC227" class="line" lang="plaintext"> python-seqcluster | 0 | {bio-dev,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> python-seqcluster | 0 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="plaintext"> python-seqcluster | 0 | {bio-dev,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC229" class="line" lang="plaintext"> q2-sample-classifier | 0 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC230" class="line" lang="plaintext"> resfinder-db | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC231" class="line" lang="plaintext"> samtools-legacy | 0 | {bio-dev} | </span>
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