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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/vdjtools">Debian Med / vdjtools</a>
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<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/vdjtools/-/commit/7acb0ec1cc056f50e98d7b51ebaa24e0a1b465e1">7acb0ec1</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-02-09T19:32:31+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Reduce precision of test result to work on all architectures
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<h4>3 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
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<a href="#636785412c4900d0009687650ebb3e0fc9f443d2">
debian/tests/vdjtools_testout.basicstats.txt.expected
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/vdjtools/-/commit/7acb0ec1cc056f50e98d7b51ebaa24e0a1b465e1#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">vdjtools (1.2.1+git20190311-5) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Reduce precision of test result to work on all architectures</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Closes: #982116</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Tue, 09 Feb 2021 19:23:06 +0100</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">vdjtools (1.2.1+git20190311-4) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> * Team upload.</span>
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<li id="8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
<a href="https://salsa.debian.org/med-team/vdjtools/-/commit/7acb0ec1cc056f50e98d7b51ebaa24e0a1b465e1#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,4 +14,5 @@ cd $AUTOPKGTEST_TMP</td>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;"># test basic invocation of the installed binary and write the output to "vdjtools_testout"</span></span>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="shell">vdjtools CalcBasicStats vdjtools.txt.gz vdjtools_testout</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="shell"><span class="nb" style="color: #0086b3;">sed</span> <span class="nt" style="color: #000080;">-i</span> <span class="s1" style="color: #d14;">'s/\(1.75443686553348\)[0-9][0-9]\(E-4\)/\1\2/'</span> vdjtools_testout.basicstats.txt</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="shell">diff vdjtools_testout.basicstats.txt vdjtools_testout.basicstats.txt.expected</span></pre>
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<li id="636785412c4900d0009687650ebb3e0fc9f443d2">
<a href="https://salsa.debian.org/med-team/vdjtools/-/commit/7acb0ec1cc056f50e98d7b51ebaa24e0a1b465e1#636785412c4900d0009687650ebb3e0fc9f443d2"><strong>debian/tests/vdjtools_testout.basicstats.txt.expected</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">sample_id metadata_blank count diversity mean_frequency geomean_frequency nc_diversity nc_frequency mean_cdr3nt_length mean_insert_size mean_ndn_size convergence</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">vdjtools . 11878 2257 4.4306601683650267E-4 1.75443686553348<span class="idiff left right">82</span>E-4 161 0.038979626199696735 42.83482067688163 0.0 0.0 1.0148381294964028</span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">vdjtools . 11878 2257 4.4306601683650267E-4 1.75443686553348E-4 161 0.038979626199696735 42.83482067688163 0.0 0.0 1.0148381294964028</span></pre>
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