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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/freebayes">Debian Med / freebayes</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/59b38a4b67c00a301caa0b3bd76569b494c88075">59b38a4b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T10:45:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.3.5</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/cc1983bcdfa4169d0fd0c33cb4b668f23c70b73b">cc1983bc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T10:45:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/359e7844d95b316986db415fb0af80cf8e681f9f">359e7844</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T10:45:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.3.5'
Update to upstream version '1.3.5'
with Debian dir fcad4b4ac3fd5b3d645ed378bc0da765ddc36f7a</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/0684fc3d75fb1713467898b123e669bbca554c42">0684fc3d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T10:45:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: watch file standard 4
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/bcd8a38b83306e6ab9d181191d16921de95e8d75">bcd8a38b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T11:28:02+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upstream took over patch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/freebayes/-/commit/0c400152f2618c285111e0809210b1c034d5e32f">0c400152</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-02-10T11:30:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#458c961a69974357f4a6f9eae6a30d1e29f41b14">
<span class="new-file">
+
.github/workflows/support-tracker-bot.yaml
</span>
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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</li>
<li class="file-stats">
<a href="#7445606fbf8f3683cd42bdc54b05d7a0bc2dfc44">
.gitmodules
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#bbab9a37b1059597d9f2d8ddca449d9c5d996265">
CMakeLists.txt
→
CMakeLists-do-not-use.txt
</a>
</li>
<li class="file-stats">
<a href="#c00c0afca84109e3fb2b98c8209ef559a912b256">
<span class="deleted-file">
−
CONTRIBUTORS
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#6f8a88f369eae9b2f3ece90d1ba6366a16f25f9c">
RELEASE-NOTES.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#c1eca1d3dd86062b5d1039af11b83099be6f66f9">
<span class="deleted-file">
−
debian/patches/libraries.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<span class="deleted-file">
−
debian/patches/series
</span>
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#8830c9ed5fb31e949b61cb9b0e6e4a49f2d44d55">
guix.scm
</a>
</li>
<li class="file-stats">
<a href="#0cc1139e3347f573ae1feee5b73dbc8a8a21fcfa">
meson.build
</a>
</li>
<li class="file-stats">
<a href="#0474358921a55dc3cf808b128e9779fe3fd19fac">
python/allelebayes.py
</a>
</li>
<li class="file-stats">
<a href="#c6552423a7799d8c74cf84d85ad02bea00909a57">
python/dirichlet.py
</a>
</li>
<li class="file-stats">
<a href="#f43efa479af1bff934e8f49ca5370d514ffd725e">
python/hwe.py
</a>
</li>
<li class="file-stats">
<a href="#08a657bb339cc320dc23f227e45abb7372b9f279">
python/multiset.py
</a>
</li>
<li class="file-stats">
<a href="#893bbd391e684ccd7d397c5c92a9795a463dca06">
scripts/coverage_to_regions.py
</a>
</li>
<li class="file-stats">
<a href="#553e03dc6dec67ad7c3ede6815c0b1197c96cb64">
scripts/fasta_generate_regions.py
</a>
</li>
<li class="file-stats">
<a href="#83d50206f924aa14ae013247fc4b22ac08603cde">
src/Allele.h
</a>
</li>
<li class="file-stats">
<a href="#d28d0b42a3d6377c030b233b5666786610f0c31a">
src/AlleleParser.cpp
</a>
</li>
<li class="file-stats">
<a href="#6532bd14206a0c12fa9892041c59ad31412e6d93">
src/AlleleParser.h
</a>
</li>
<li class="file-stats">
<a href="#c5a2c3795f637648b559e56b40d99d91ca200b3a">
<span class="deleted-file">
−
src/BGZF.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#5c8230cef12561f380d7ab32b2ff25318f57432c">
<span class="deleted-file">
−
src/BGZF.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#d7139d0171691baf0333e8e31f654c5d1a2ad985">
src/BedReader.cpp
</a>
</li>
<li class="file-stats">
<a href="#064f6f30b2ef573145e550cf01828d6462d0f335">
src/BedReader.h
</a>
</li>
<li class="file-stats">
<a href="#74d7562f3bb82d2d9fbb66ce878711cdce98e361">
src/Bias.cpp
</a>
</li>
<li class="file-stats">
<a href="#32bd4ad84caa276a64a2dc5d57d266e7df6e8e40">
src/Bias.h
</a>
</li>
<li class="file-stats">
<a href="#b67ef0c32df1e9565f6554129a201ad54baa9676">
src/CNV.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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—
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<a href="https://salsa.debian.org/med-team/freebayes/-/compare/2d3f8da10e24e7a57382ec40741ab72c7c397185...0c400152f2618c285111e0809210b1c034d5e32f">View it on GitLab</a>.
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