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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/repeatmasker-recon">Debian Med / repeatmasker-recon</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/commit/d381c65687ba2b8c44646bc41e850d6414314895">d381c656</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-02-16T21:03:51+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix FTCBFS by not hardcoding make in d/rules (Closes: #982912)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/commit/75256aaed770eff676700fb1368d971640c99434">75256aae</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-02-16T21:04:25+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop help2man from build-deps
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/commit/79cd63b1bf74da600ff93de98ecbf1e58052095b">79cd63b1</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-02-16T21:04:54+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add myself to uploaders
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/commit/de880b414f5b443a5f2c6bbe8ebd58dfbdbaf6f6">de880b41</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-02-16T21:07:08+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add salsa-ci.yml
</pre>
</li>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
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<h4>Changes:</h4>
<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/compare/c1b624607d845bb1a1430d407a249efa538fd701...de880b414f5b443a5f2c6bbe8ebd58dfbdbaf6f6#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Source: repeatmasker-recon</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Uploaders: Olivier Sallou <osallou@debian.org>,</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org>,</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Nilesh Patra <npatra974@gmail.com></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> help2man</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13)</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Standards-Version: 4.5.0</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/repeatmasker-recon</span>
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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/repeatmasker-recon.git</span>
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<li id="8756c63497c8dc39f7773438edf53b220c773f67">
<a href="https://salsa.debian.org/med-team/repeatmasker-recon/-/compare/c1b624607d845bb1a1430d407a249efa538fd701...de880b414f5b443a5f2c6bbe8ebd58dfbdbaf6f6#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,19 +17,18 @@ export DEB_BUILD_MAINT_OPTIONS = hardening=+all</td>
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<td class="diff-line-num old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"># main packaging script based on dh7 syntax</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">%:</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> dh $@</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> dh $@<span class="idiff left right"> --sourcedirectory=src</span></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext">override_dh_auto_<span class="idiff left right">build</span>:</span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">cd src; make</span></span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext">override_dh_auto_<span class="idiff left right">test</span>:</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">echo "Do not run tests since there exists no testsuite.sh needed to run those in the package"</span></span>
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24
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"></span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"><span class="idiff left right">overrid</span>e_dh_auto_install:</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"><span class="idiff left right">execute_befor</span>e_dh_auto_install:</span>
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26
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> mkdir -p bin</span>
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27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"><span class="idiff left right"> cd src; make install</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"><span class="idiff left right"> dh_install</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"><span class="idiff left right">execute_after_dh_install:</span></span>
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29
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> cp scripts/recon.pl debian/repeatmasker-recon/usr/bin/repeatmasker-recon</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> cp scripts/MSPCollect.pl debian/repeatmasker-recon/usr/bin/MSPCollect</span>
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31
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext">override_dh_clean:</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> cd src; make clean</span>
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34
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> rm -rf bin</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> dh_clean</span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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