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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/hyphy">Debian Med / hyphy</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/bb074df3c21c261dc4fa5166a3928a95c454d4b6">bb074df3</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2021-02-19T17:15:15+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/0f37b8904b7f1a12ac9ea7a5b023b577e91001a6">0f37b890</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2021-02-20T09:53:05+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.28+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/42e51e43952a3cfa5d6524e74b46feaeb4a27e8d">42e51e43</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2021-02-20T10:09:43+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">autopkgtests: don't skip two tests
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/hyphy/-/commit/4682e91cbed5f0ba25d744916f58ec8678c5bb81">4682e91c</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2021-02-20T10:09:43+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#b8880ead45e8d099a1552defb95ea70479f1572e">
debian/tests/run-unit-tests
</a>
</li>
<li class="file-stats">
<a href="#bbf184515d0630124e39a202e2344cff03f6e7ca">
res/TemplateBatchFiles/Distances/JC69
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</li>
<li class="file-stats">
<a href="#94e2892ef7e34b84150a621ea73e06a722aaa399">
res/TemplateBatchFiles/Distances/K2P
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</li>
<li class="file-stats">
<a href="#24c566b7b79e824c2474388755e558421595c18e">
res/TemplateBatchFiles/Distances/K2P_RV
</a>
</li>
<li class="file-stats">
<a href="#33d754cc68757254f06cdd97c34a757bd76f6244">
res/TemplateBatchFiles/Distances/Modified_Nei_Gojobori
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</li>
<li class="file-stats">
<a href="#ab35fc67b0889518ecad176b05bcd80ed8ccde06">
res/TemplateBatchFiles/Distances/Nei_Gojobori
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</li>
<li class="file-stats">
<a href="#2e741b0ad1119a6d758a85e18f984747cafc04b9">
res/TemplateBatchFiles/Distances/PC
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</li>
<li class="file-stats">
<a href="#79422fd59dac4663d8b186ef18e206a3eaaa1655">
res/TemplateBatchFiles/Distances/PC_MH
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</li>
<li class="file-stats">
<a href="#f5ea9ecacce3f54698f22cb2051c3d9d81bc3283">
res/TemplateBatchFiles/Distances/PC_RV
</a>
</li>
<li class="file-stats">
<a href="#1cce1ee0ed01c28ac92b776bb82114d4a43dd8bb">
res/TemplateBatchFiles/Distances/T3P
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<li class="file-stats">
<a href="#54d98f129e480c9597ba0883f1894b380a0d7ea0">
res/TemplateBatchFiles/Distances/TN84
</a>
</li>
<li class="file-stats">
<a href="#97c7b26c9741bc48edbbd10489b3de0f49ffaff0">
res/TemplateBatchFiles/Distances/TN93
</a>
</li>
<li class="file-stats">
<a href="#c054ac55aca168ee71b5991cc0558358e4300ff9">
res/TemplateBatchFiles/Distances/TN93_RV
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</li>
<li class="file-stats">
<a href="#7576687681e0519c6dc99afa15327aa36e109579">
res/TemplateBatchFiles/Distances/p_Distance
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</li>
<li class="file-stats">
<a href="#1042c8ee228d8e1ada393b8e769629f94105f4f0">
res/TemplateBatchFiles/Distances/p_Distance_aa
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</li>
<li class="file-stats">
<a href="#f03ea076a8ede4e087abb4e6ccdda4e6b754c57f">
res/TemplateBatchFiles/Distances/p_Distance_binary
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</li>
<li class="file-stats">
<a href="#5474bbba8f9e8c59051a3d4e107de3c28ffa95c2">
res/TemplateBatchFiles/Distances/p_Distance_codon
</a>
</li>
<li class="file-stats">
<a href="#d76a9b9f3a5b58b8ab344a6fc421ce8a9b1af242">
res/TemplateBatchFiles/F_ST.bf
</a>
</li>
<li class="file-stats">
<a href="#817efc81f1180519a6136b50a447433f20cf679d">
res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
</a>
</li>
<li class="file-stats">
<a href="#bc98d7300147ce39ef8ee0f9b35f3252bebd01d2">
res/TemplateBatchFiles/SelectionAnalyses/MEME.bf
</a>
</li>
<li class="file-stats">
<a href="#5dfec713e3892a936e8b5a63db56c03bee3ec252">
res/TemplateBatchFiles/libv3/all-terms.bf
</a>
</li>
<li class="file-stats">
<a href="#e8578acaed39aa42e302cfc6b43e09678d292e72">
<span class="new-file">
+
res/TemplateBatchFiles/libv3/models/codon/MSS.bf
</span>
</a>
</li>
<li class="file-stats">
<a href="#c7933e171033f4eac9d83419583cca5474f9266c">
res/TemplateBatchFiles/libv3/tasks/estimators.bf
</a>
</li>
<li class="file-stats">
<a href="#3945e6db8feb0e4ed58719b69ff3d8485bc45e87">
res/TemplateBatchFiles/libv3/tasks/trees.bf
</a>
</li>
<li class="file-stats">
<a href="#a4410fd4c02b1977b649d4cfb858222f784599aa">
res/TemplateBatchFiles/partitionSequences.ibf
</a>
</li>
<li class="file-stats">
<a href="#02cbcb76e8ce1aa3e72d55e6696cda20813d57b6">
src/core/batchlan.cpp
</a>
</li>
<li class="file-stats">
<a href="#cbedcf5fec686e5f563504b995c5d7d07fd8c6b2">
src/core/batchlanruntime.cpp
</a>
</li>
<li class="file-stats">
<a href="#7474aa77ff4fbb7ca8b12091ad6d5e459fdc18c6">
src/core/dataset.cpp
</a>
</li>
<li class="file-stats">
<a href="#07aceb8d215a75908cea626d9c80bc2a7c06639c">
src/core/global_things.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<a href="https://salsa.debian.org/med-team/hyphy/-/compare/8cb707d2dbbd6ec462403f48887c838cf4fca2c3...4682e91cbed5f0ba25d744916f58ec8678c5bb81">View it on GitLab</a>.
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