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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/spades">Debian Med / spades</a>
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<h4>
Commits:
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<ul>
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<strong><a href="https://salsa.debian.org/med-team/spades/-/commit/16312b835188d25109564d1603f4e4d1e4150a45">16312b83</a></strong>
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<span>by Étienne Mollier</span>
<i>at 2021-02-27T10:46:30+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix baseline violation caused by popcnt asm call
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<h4>3 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#1e268e6b183b1029869537017f974759680b78b7">
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+
debian/patches/fix-sigill-on-non-popcnt-cpus.patch
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/spades/-/commit/16312b835188d25109564d1603f4e4d1e4150a45#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -43,6 +43,9 @@ spades (3.15.1+dfsg-1) UNRELEASED; urgency=medium</td>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> * Add disable_local_convertutf.patch: to cover for dfsg-removed ConvertUTF.o,</span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> link against system's LLVMSupport.a</span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> [ Étienne Mollier ]</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> * Add fix-sigill-on-non-popcnt-cpus.patch; fixes baseline violation.</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> -- Juhani Numminen <juhaninumminen0@gmail.com> Fri, 26 Feb 2021 13:07:24 +0200</span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext">spades (3.13.1+dfsg-2) unstable; urgency=medium</span>
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<li id="1e268e6b183b1029869537017f974759680b78b7">
<a href="https://salsa.debian.org/med-team/spades/-/commit/16312b835188d25109564d1603f4e4d1e4150a45#1e268e6b183b1029869537017f974759680b78b7"><strong>debian/patches/fix-sigill-on-non-popcnt-cpus.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: fix baseline violation caused by asm calling popcnt</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Author: Étienne Mollier <etienne.mollier@mailoo.org></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Forwarded: no</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Last-Update: 2021-02-27</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">---</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">This patch header follows DEP-3: http://dep.debian.net/deps/dep3/</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- spades.orig/assembler/ext/src/gqf/gqf.c</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ spades/assembler/ext/src/gqf/gqf.c</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="p">@@ -174,11 +174,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> static inline int popcnt(uint64_t val) {</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- asm("popcnt %[val], %[val]"</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- : [val] "+r" (val)</span></span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- :</span></span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- : "cc");</span></span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return val;</span></span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ return __builtin_popcount(val);</span></span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> }</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> static inline int popcntv(const uint64_t val, int ignore)</span></pre>
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<a href="https://salsa.debian.org/med-team/spades/-/commit/16312b835188d25109564d1603f4e4d1e4150a45#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,3 +17,4 @@ debuginfo.patch</td>
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17
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17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">debian_bwa_zlib.patch</span>
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18
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">workdir_for_test.patch</span>
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19
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">disable_local_convertutf.patch</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext">fix-sigill-on-non-popcnt-cpus.patch</span></pre>
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