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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/584c24e869c96410847bd3b4e6502fbfcd2d3501">584c24e8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-04-05T13:42:19+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/584c24e869c96410847bd3b4e6502fbfcd2d3501#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 05 Apr 2021 <span class="idiff left right">0</span>1:42:04 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 05 Apr 2021 1<span class="idiff left right">3</span>:42:04 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 20<span class="idiff left right">7</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">9</span> | {covid-19,imaging,practice} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">8</span> | {his,practice,covid-19,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm | <span class="idiff left right">38</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> amide | 3<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 20<span class="idiff left right">6</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">8</span> | {covid-19,imaging,practice} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 4<span class="idiff left right">7</span> | {his,practice,covid-19,oncology,imaging,laboratory} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm | <span class="idiff left right">40</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> amide | 3<span class="idiff left right">6</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools | 33 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> openslide | 3<span class="idiff left right">2</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> openslide | 3<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope | 27 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> dcm2niix | 25 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> gdcm | 22 | {covid-19,imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,28 +19,29 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> pixelmed | 17 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> dicomnifti | 16 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> gdcm | 16 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> invesalius | 16 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> mia | 16 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> gnumed-server | 15 | {covid-19,practice} | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> vtk-dicom | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> plastimatch | 12 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> adun.app | 11 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> insighttoolkit4 | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> nifti2dicom | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> orthanc-webviewer | 11 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> plastimatch | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> nifti2dicom | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> king | 9 | {typesetting,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> melting | 9 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> ngs-sdk | <span class="idiff left right">9</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> ngs-sdk | <span class="idiff left right">8</span> | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> ngs-sdk | 7 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> bamkit | 6 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> dicompyler | 6 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> jebl2 | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> libminc | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> nipype | 6 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> treeview | 6 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> elastix | 5 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> lagan | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> librg-utils-perl | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> nipype | 5 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> obitools | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> openslide | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> salmid | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -51,8 +52,8 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> biojava-live | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> biomaj3-cli | 4 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> ea-utils | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> elastix | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> estscan | 4 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> lamarc | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> libncl | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> ngs-sdk | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> orthanc-dicomweb | 4 | {imaging,covid-19} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -72,8 +73,8 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> getdata | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> ghmm | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> jellyfish1 | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="plaintext"> lamarc | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> libdivsufsort | 3 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> libpal-java | 3 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> logol | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> nifticlib | 3 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> orthanc-postgresql | 3 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -88,7 +89,6 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> sambamba | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> sibsim4 | 3 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> sift | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> sight | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> stacks | 3 | {bio} | </span>
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93
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> suitename | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> yaha | 3 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="110" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -110,7 +110,6 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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110
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> intake | 2 | {bio-dev,bio} | </span>
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111
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> ipig | 2 | {bio} | </span>
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112
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> jmodeltest | 2 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext"> libpal-java | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> librdp-taxonomy-tree-java | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> libsbml | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> mauve-aligner | 2 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -134,6 +133,7 @@ Last-Update: Mon, 05 Apr 2021 01:42:04 +0000</td>
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133
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> segemehl | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> seq-gen | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> sga | 2 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="plaintext"> sight | 2 | {imaging} | </span>
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137
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="plaintext"> soapaligner | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> soapsnp | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> spaced | 2 | {bio} | </span>
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