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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
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<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3a82ed85bd891913de43fe15b352ebf48bd045dc">3a82ed85</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-05-20T13:42:21+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3a82ed85bd891913de43fe15b352ebf48bd045dc#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 20 May 2021 <span class="idiff left right">0</span>1:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Thu, 20 May 2021 1<span class="idiff left right">3</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> dcmtk | 181 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">4</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm | 5<span class="idiff left right">6</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">5</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm | 5<span class="idiff left right">5</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 48 | {imaging,laboratory,practice,his,covid-19,oncology} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> amide | 31 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> dicom3tools | 31 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> amide | 30 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> nipype | 30 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dicom3tools | 29 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> htsjdk | 27 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">6</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> openslide | 21 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> gdcm | 20 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> gdcm | 20 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> <span class="idiff left">odin</span> | <span class="idiff">18</span> | {imaging-dev<span class="idiff right">,imaging}</span> | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> <span class="idiff left">gnumed-server</span> | 17 | {<span class="idiff right">covid-19,practice} </span> | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> <span class="idiff left">pixelmed </span> | 16 | {<span class="idiff right">imaging} </span> | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> <span class="idiff left">gdcm</span> | <span class="idiff">20</span> | {imaging-dev<span class="idiff right">} </span> | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> <span class="idiff left">odin </span> | 17 | {<span class="idiff right">imaging-dev,imaging}</span> | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> <span class="idiff left">gnumed-server</span> | 16 | {<span class="idiff right">covid-19,practice}</span> | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> minc-tools | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> ngs-sdk | 15 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> pixelmed | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> minc-tools | 14 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> orthanc-webviewer | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> nifticlib | 13 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> orthanc-webviewer | 13 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> dicomnifti | 12 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> plastimatch | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> insighttoolkit4 | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> ngs-sdk | 10 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> vtk-dicom | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> king | 9 | {imaging,typesetting} | </span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> mia | 9 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> bamkit | 8 | {covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> ngs-sdk | 8 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> mia | 8 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> openslide | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> adun.app | 7 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> bamkit | 7 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> dicompyler | 7 | {oncology} | </span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> ngs-sdk | 7 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> nifti2dicom | 7 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> openslide | 7 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> nifti2dicom | 6 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> orthanc-dicomweb | 6 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> bart-view | 5 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -56,7 +56,6 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> getdata | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> lagan | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> oscar | 3 | {data,practice,tools} | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> plasmidid | 3 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> pymia | 3 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> tracetuner | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> biojava-live | 2 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -75,7 +74,7 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> obitools | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> orthanc-gdcm | 2 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> papyrus | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> <span class="idiff left">rambo-k </span> | 2 | {<span class="idiff right">bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> <span class="idiff left">plasmidid</span> | 2 | {<span class="idiff right">covid-19,bio}</span> | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> runcircos-gui | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> sift | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> sight | 2 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -99,7 +98,6 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> ipig | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> libctapimkt | 1 | {practice} | </span>
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100
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> libdivsufsort | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC102" class="line" lang="plaintext"> libmuscle | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> libncl | 1 | {bio} | </span>
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102
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> logol | 1 | {bio} | </span>
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103
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> mauve-aligner | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -118,6 +116,7 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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116
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> python-bcbio-gff | 1 | {bio-dev} | </span>
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117
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> qcumber | 1 | {bio} | </span>
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118
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> quorum | 1 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext"> rambo-k | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> saint | 1 | {bio} | </span>
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121
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> segemehl | 1 | {bio} | </span>
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122
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> sibsim4 | 1 | {cloud,bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -140,8 +139,8 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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139
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> emmax | 0 | {bio} | </span>
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141
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140
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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142
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141
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> fsm-lite | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext"> gatb-core | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext"> gatb-core | 0 | {bio} | </span>
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145
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> gifticlib | 0 | {imaging-dev} | </span>
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145
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> hinge | 0 | {bio} | </span>
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146
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> htscodecs | 0 | {covid-19,bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -168,6 +167,7 @@ Last-Update: Thu, 20 May 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> libmaus2 | 0 | {bio-dev,covid-19} | </span>
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169
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> libmems | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC169" class="line" lang="plaintext"> libmialm | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext"> libmuscle | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> libncl | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> libpal-java | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> libpsortb | 0 | {bio-dev} | </span>
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