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<h3>
Nilesh Patra pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/vbz-compression">Debian Med / vbz-compression</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84">0ab35a67</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-05-22T19:23:35+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.0.1</pre>
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<h4>20 changed files:</h4>
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<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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</li>
<li class="file-stats">
<a href="#eae6d84ac9fa99971bcc550e548af0aea1238ca1">
<span class="new-file">
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LICENCE.txt
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#09d6101be8561dfd1d2651a9b0411f2baa8dff3f">
<span class="deleted-file">
−
cmake/FindHDF5.cmake
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<li class="file-stats">
<a href="#1f03a45b2333b3e3931d694cb1a25d293c02c888">
<span class="new-file">
+
cmake/SignFile.cmake
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<li class="file-stats">
<a href="#61b8058db2cdf3567f94a73875e8a35c244e669e">
<span class="new-file">
+
cmake/SigningUtils.cmake
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<li class="file-stats">
<a href="#2075fe5fa9309a828fb6e9df35ed15df2af4256a">
cmake/conan.cmake
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<li class="file-stats">
<a href="#73c403c4b40d4c36b2715f77c408460e0f5fd40c">
<span class="deleted-file">
−
conanfile.txt
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<li class="file-stats">
<a href="#930ff9e732755d92ad4ffb21bc49b7e5e3e6ad46">
<span class="deleted-file">
−
license.txt
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<li class="file-stats">
<a href="#59555a82808408a732151d8289dc6e696db3e081">
packaging/hdf_plugin_packaging.cmake
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<li class="file-stats">
<a href="#4a76672f5d4bdb708af5fd2c48f4f868b16cb200">
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+
python/fast5compress/fast5vbz.py
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<li class="file-stats">
<a href="#88d502725b7e50e2e853d328d6c01f442c333715">
python/pyvbz/setup.py
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<li class="file-stats">
<a href="#bff01f298b0810a7d152d7bcb141eef12b0d5b5b">
python/test/test_vbz_filter.py
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<li class="file-stats">
<a href="#1fbf3843d01cc025d3cb79c548e54b9936ce1adb">
vbz/v0/vbz_streamvbyte_impl_sse3.h
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<li class="file-stats">
<a href="#f297bdc416c43d004e103af1b250b55a3e5033e7">
vbz_plugin/CMakeLists.txt
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<li class="file-stats">
<a href="#3b04fb7a6879ccd20c25c4db074518a793bade52">
vbz_plugin/hdf_test_utils/CMakeLists.txt
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<li class="file-stats">
<a href="#08cea695dd5c712bb3a8415a5bc014fcec4042cf">
vbz_plugin/perf/CMakeLists.txt
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<li class="file-stats">
<a href="#75322fb267f7fb9f4d694761113ba0c628250a9c">
vbz_plugin/test/CMakeLists.txt
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<li class="file-stats">
<a href="#188d25852979d57b9528863db1a535d734af9cfd">
vbz_plugin/vbz_plugin.cpp
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<li class="file-stats">
<a href="#a443fd8fb2d9d0e6ac2a1d56d9d14d2abb8bd7b0">
vbz_plugin/vbz_plugin_user_utils.h
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</li>
</ul>
<h4>Changes:</h4>
<li id="9a2aa4db38d3115ed60da621e012c0efc0172aae">
<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#9a2aa4db38d3115ed60da621e012c0efc0172aae"><strong>CMakeLists.txt</strong></a>
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<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">
<tr class="line_holder match" id="" style="line-height: 1.6;">
<td class="diff-line-num unfold js-unfold old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,7 +2,7 @@ cmake_minimum_required(VERSION 3.11.0)</td>
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<td class="old_line diff-line-num" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2
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<td class="new_line diff-line-num" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
2
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2" class="line" lang="cmake"></span>
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<td class="old_line diff-line-num" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC3" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">execute_process</span><span class="p">(</span></span>
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<td class="old_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC4" class="line" lang="cmake"> COMMAND git describe --tags</span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="new_line diff-line-num old" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="line_content old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">
<pre style="margin: 0;">-<span id="LC5" class="line" lang="cmake"> WORKING_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
5
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC5" class="line" lang="cmake"> WORKING_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_<span class="idiff left right">CURRENT_</span>SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
</pre>
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<td class="old_line diff-line-num" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC6" class="line" lang="cmake"> OUTPUT_VARIABLE GIT_VERSION</span>
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<td class="old_line diff-line-num" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
7
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC7" class="line" lang="cmake"> OUTPUT_STRIP_TRAILING_WHITESPACE</span>
</pre>
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<td class="old_line diff-line-num" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC8" class="line" lang="cmake"><span class="p">)</span></span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -13,14 +13,18 @@ set(GIT_VERSION "${CMAKE_MATCH_1}")</td>
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<td class="old_line diff-line-num" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>STATUS <span class="s2" style="color: #d14;">"Building version </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">GIT_VERSION</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">project</span><span class="p">(</span>hdf_plugins</span>
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<td class="old_line diff-line-num" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="cmake"> VERSION <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">GIT_VERSION</span><span class="si" style="color: #d14;">}</span></span>
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<td class="old_line diff-line-num old" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="new_line diff-line-num old" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="cmake"> LANGUAGES CXX</span>
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<td class="old_line diff-line-num new" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC16" class="line" lang="cmake"> LANGUAGES CXX<span class="idiff left right"> C</span></span>
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<td class="old_line diff-line-num" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC17" class="line" lang="cmake"><span class="p">)</span></span>
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<td class="old_line diff-line-num" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="cmake"></span>
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<td class="old_line diff-line-num" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CMAKE_POSITION_INDEPENDENT_CODE ON<span class="p">)</span></span>
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<td class="old_line diff-line-num" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC20" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>ExternalProject<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>GenerateExportHeader<span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>CTest<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="cmake"><span class="c1" style="color: #998; font-style: italic;"># If we're including hdf_plugins as a subdir then we might not be able</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="cmake"><span class="c1" style="color: #998; font-style: italic;"># to override BUILD_TESTING from CTest's default ON value.</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT DEFINED BUILD_TESTING OR BUILD_TESTING<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>CTest<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT CMAKE_CONFIGURATION_TYPES AND NOT CMAKE_BUILD_TYPE<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>STATUS <span class="s2" style="color: #d14;">"No CMAKE_BUILD_TYPE set - defaulting to Debug"</span><span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -31,6 +35,7 @@ if (NOT CMAKE_CONFIGURATION_TYPES AND NOT CMAKE_BUILD_TYPE)</td>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CMAKE_BUILD_TYPE <span class="s2" style="color: #d14;">"Debug"</span> CACHE STRING <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_bt_docstring</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span> FORCE<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF_PLUGIN_SOURCE_DIR <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_CURRENT_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CMAKE_MODULE_PATH <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_CURRENT_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/cmake"</span> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_MODULE_PATH</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT DEFINED VBZ_BUILD_ARCHIVE<span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -53,6 +58,17 @@ if (NOT DEFINED ENABLE_CONAN)</td>
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53
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">option</span><span class="p">(</span>ENABLE_CONAN <span class="s2" style="color: #d14;">"Enable conan for dependency installation"</span> ON<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT DEFINED STANDARD_LIB_INSTALL<span class="p">)</span></span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>STD_LIB_INSTALL_DEFAULT OFF<span class="p">)</span></span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>CMAKE_CURRENT_SOURCE_DIR STREQUAL CMAKE_CURRENT_DIR<span class="p">)</span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>STD_LIB_INSTALL_DEFAULT ON<span class="p">)</span></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">option</span><span class="p">(</span>STANDARD_LIB_INSTALL</span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"Install library to standard lib / bin paths"</span></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">STD_LIB_INSTALL_DEFAULT</span><span class="si" style="color: #d14;">}</span></span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="cmake"> <span class="p">)</span></span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="cmake"></span>
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56
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72
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT VBZ_BUILD_ARCHIVE<span class="p">)</span></span>
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57
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73
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CMAKE_ARCHIVE_OUTPUT_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_BINARY_DIR</span><span class="si" style="color: #d14;">}</span>/lib<span class="p">)</span></span>
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74
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CMAKE_LIBRARY_OUTPUT_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_BINARY_DIR</span><span class="si" style="color: #d14;">}</span>/bin<span class="p">)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -70,8 +86,21 @@ if (ENABLE_CONAN)</td>
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70
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86
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">else</span><span class="p">()</span></span>
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71
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87
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>conan<span class="p">)</span></span>
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72
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88
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="cmake"></span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_requirements</span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"zstd/1.3.4@nanopore/stable"</span><span class="p">)</span></span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_generators</span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="cmake"> cmake</span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="cmake"> json<span class="p">)</span></span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_imports</span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"bin, *.dll -> ../bin"</span></span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"lib, *.dylib* -> ../bin"</span><span class="p">)</span></span>
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97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_extra_args<span class="p">)</span></span>
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74
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98
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="cmake"></span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>ENABLE_PERF_TESTING<span class="p">)</span></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>APPEND _requirements</span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"google-benchmark/1.5@nanopore/stable"</span></span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="cmake"> <span class="p">)</span></span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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104
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>CMAKE_BUILD_TYPE<span class="p">)</span></span>
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105
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_build_type_DEBUG Debug<span class="p">)</span></span>
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106
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_build_type_RELEASE Release<span class="p">)</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="82" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -82,8 +111,18 @@ if (ENABLE_CONAN)</td>
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111
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>APPEND _extra_args BUILD_TYPE <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_build_type_</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_build_type</span><span class="si" style="color: #d14;">}}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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83
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112
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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84
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113
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>CONAN_EXTRA_SETTINGS<span class="p">)</span></span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>APPEND _extra_args</span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="cmake"> SETTINGS</span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CONAN_EXTRA_SETTINGS</span><span class="si" style="color: #d14;">}</span></span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="cmake"> <span class="p">)</span></span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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120
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">conan_cmake_run</span><span class="p">(</span>CONANFILE conanfile.txt <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_extra_args</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">conan_cmake_run</span><span class="p">(</span></span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="cmake"> GENERATORS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_generators</span><span class="si" style="color: #d14;">}</span></span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="cmake"> REQUIRES <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_requirements</span><span class="si" style="color: #d14;">}</span></span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="cmake"> IMPORTS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_imports</span><span class="si" style="color: #d14;">}</span></span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_extra_args</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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87
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126
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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88
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127
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">conan_check_compiler</span><span class="p">()</span></span>
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89
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128
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">conan_define_targets</span><span class="p">()</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -94,10 +133,10 @@ if (ENABLE_PACKAGING)</td>
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94
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133
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>packaging/hdf_plugin_packaging.cmake<span class="p">)</span></span>
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95
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134
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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96
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135
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="cmake"></span>
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97
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<pre style="margin: 0;">-<span id="LC97" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include_directories</span><span class="p">(</span><span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/third_party"</span><span class="p">)</span></span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include_directories</span><span class="p">(</span><span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_<span class="idiff left right">CURRENT_</span>SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/third_party"</span><span class="p">)</span></span>
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98
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137
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="cmake"></span>
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99
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138
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">find_package</span><span class="p">(</span>HDF5 1.8.16<span class="p">)</span></span>
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100
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<pre style="margin: 0;">-<span id="LC100" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">find_package</span><span class="p">(</span>zstd 1.3.<span class="idiff left right">3</span> REQUIRED<span class="p">)</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">find_package</span><span class="p">(</span>zstd 1.3.<span class="idiff left right">1</span> REQUIRED<span class="p">)</span></span>
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101
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140
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">find_package</span><span class="p">(</span>Sanitizers<span class="p">)</span></span>
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102
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141
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="cmake"></span>
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103
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">get_filename_component</span><span class="p">(</span>STREAMVBYTE_SOURCE_DIR</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="117" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -117,7 +156,7 @@ ExternalProject_Add(</td>
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117
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156
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="cmake"> SOURCE_DIR <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">STREAMVBYTE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
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118
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157
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="cmake"> UPDATE_DISCONNECTED TRUE</span>
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119
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158
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="cmake"> PREFIX <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">STREAMVBYTE_PREFIX</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">-<span id="LC120" class="line" lang="cmake"> CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">STREAMVBYTE_INSTALL_DIR</span><span class="si" style="color: #d14;">}</span> -DSTREAMVBYTE_DISABLE_NATIVE=ON</span>
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="cmake"> CMAKE_ARGS -DCMAKE_INSTALL_PREFIX=<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">STREAMVBYTE_INSTALL_DIR</span><span class="si" style="color: #d14;">}</span> -DSTREAMVBYTE_DISABLE_NATIVE=ON<span class="idiff left"> -DSTD_FLAGS=</span><span class="s2" style="color: #d14;"><span class="idiff right">"-std=c99"</span></span></span>
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="cmake"> <span class="c1" style="color: #998; font-style: italic;"># We need to tell CMake about libraries we will link to, otherwise some generators (eg: Ninja)</span></span>
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<pre style="margin: 0;"> <span id="LC161" class="line" lang="cmake"> <span class="c1" style="color: #998; font-style: italic;"># complain about how knowing how to build libstreamvbyte_static.a, for example.</span></span>
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<pre style="margin: 0;"> <span id="LC162" class="line" lang="cmake"> <span class="c1" style="color: #998; font-style: italic;"># Ideally, we'd set a hypothetical INSTALL_BYPRODUCTS, and link to the installed file, but that</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -199,6 +238,8 @@ elseif (CMAKE_CXX_COMPILER_ID MATCHES "Clang") # AppleClang and Clang</td>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="cmake"> <span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;"> <span id="LC240" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>SigningUtils<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>ENABLE_PYTHON<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">add_subdirectory</span><span class="p">(</span>python<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#eae6d84ac9fa99971bcc550e548af0aea1238ca1"><strong>LICENCE.txt</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Mozilla Public License Version 2.0</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">==================================</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">1. Definitions</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">--------------</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">1.1. "Contributor"</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> means each individual or legal entity that creates, contributes to</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> the creation of, or owns Covered Software.</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">1.2. "Contributor Version"</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> means the combination of the Contributions of others (if any) used</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> by a Contributor and that particular Contributor's Contribution.</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">1.3. "Contribution"</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> means Covered Software of a particular Contributor.</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext">1.4. "Covered Software"</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> means Source Code Form to which the initial Contributor has attached</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> the notice in Exhibit A, the Executable Form of such Source Code</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> Form, and Modifications of such Source Code Form, in each case</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> including portions thereof.</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext">1.5. "Incompatible With Secondary Licenses"</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> means</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> (a) that the initial Contributor has attached the notice described</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> in Exhibit B to the Covered Software; or</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> (b) that the Covered Software was made available under the terms of</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> version 1.1 or earlier of the License, but not also under the</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> terms of a Secondary License.</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext">1.6. "Executable Form"</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> means any form of the work other than Source Code Form.</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext">1.7. "Larger Work"</span>
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<td class="new_line diff-line-num new" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> means a work that combines Covered Software with other material, in</span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> a separate file or files, that is not Covered Software.</span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext">1.8. "License"</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> means this document.</span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext">1.9. "Licensable"</span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> means having the right to grant, to the maximum extent possible,</span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> whether at the time of the initial grant or subsequently, any and</span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> all of the rights conveyed by this License.</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext">1.10. "Modifications"</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> means any of the following:</span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> (a) any file in Source Code Form that results from an addition to,</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> deletion from, or modification of the contents of Covered</span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> Software; or</span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> (b) any new file in Source Code Form that contains any Covered</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> Software.</span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext">1.11. "Patent Claims" of a Contributor</span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> means any patent claim(s), including without limitation, method,</span>
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61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> process, and apparatus claims, in any patent Licensable by such</span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> Contributor that would be infringed, but for the grant of the</span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> License, by the making, using, selling, offering for sale, having</span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> made, import, or transfer of either its Contributions or its</span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> Contributor Version.</span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"></span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext">1.12. "Secondary License"</span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> means either the GNU General Public License, Version 2.0, the GNU</span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="plaintext"> Lesser General Public License, Version 2.1, the GNU Affero General</span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext"> Public License, Version 3.0, or any later versions of those</span>
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71
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> licenses.</span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext"></span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="plaintext">1.13. "Source Code Form"</span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> means the form of the work preferred for making modifications.</span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"></span>
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76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext">1.14. "You" (or "Your")</span>
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77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> means an individual or a legal entity exercising rights under this</span>
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78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> License. For legal entities, "You" includes any entity that</span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="plaintext"> controls, is controlled by, or is under common control with You. For</span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> purposes of this definition, "control" means (a) the power, direct</span>
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81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext"> or indirect, to cause the direction or management of such entity,</span>
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82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> whether by contract or otherwise, or (b) ownership of more than</span>
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83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> fifty percent (50%) of the outstanding shares or beneficial</span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="plaintext"> ownership of such entity.</span>
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85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="plaintext"></span>
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86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="plaintext">2. License Grants and Conditions</span>
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87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext">--------------------------------</span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="plaintext"></span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext">2.1. Grants</span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="plaintext"></span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext">Each Contributor hereby grants You a world-wide, royalty-free,</span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="plaintext">non-exclusive license:</span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="plaintext"></span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext">(a) under intellectual property rights (other than patent or trademark)</span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext"> Licensable by such Contributor to use, reproduce, make available,</span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="plaintext"> modify, display, perform, distribute, and otherwise exploit its</span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="plaintext"> Contributions, either on an unmodified basis, with Modifications, or</span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext"> as part of a Larger Work; and</span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="plaintext"></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="plaintext">(b) under Patent Claims of such Contributor to make, use, sell, offer</span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> for sale, have made, import, and otherwise transfer either its</span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext"> Contributions or its Contributor Version.</span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="plaintext"></span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext">2.2. Effective Date</span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext"></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="plaintext">The licenses granted in Section 2.1 with respect to any Contribution</span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext">become effective for each Contribution on the date the Contributor first</span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext">distributes such Contribution.</span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="plaintext"></span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="plaintext">2.3. Limitations on Grant Scope</span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="plaintext"></span>
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112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="plaintext">The licenses granted in this Section 2 are the only rights granted under</span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext">this License. No additional rights or licenses will be implied from the</span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext">distribution or licensing of Covered Software under this License.</span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext">Notwithstanding Section 2.1(b) above, no patent license is granted by a</span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext">Contributor:</span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="plaintext"></span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext">(a) for any code that a Contributor has removed from Covered Software;</span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext"> or</span>
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120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="plaintext"></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="plaintext">(b) for infringements caused by: (i) Your and any other third party's</span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="plaintext"> modifications of Covered Software, or (ii) the combination of its</span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext"> Contributions with other software (except as part of its Contributor</span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="plaintext"> Version); or</span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext"></span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext">(c) under Patent Claims infringed by Covered Software in the absence of</span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> its Contributions.</span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="plaintext"></span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="plaintext">This License does not grant any rights in the trademarks, service marks,</span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext">or logos of any Contributor (except as may be necessary to comply with</span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="plaintext">the notice requirements in Section 3.4).</span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="plaintext"></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext">2.4. Subsequent Licenses</span>
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134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext"></span>
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135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext">No Contributor makes additional grants as a result of Your choice to</span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="plaintext">distribute the Covered Software under a subsequent version of this</span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext">License (see Section 10.2) or under the terms of a Secondary License (if</span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="plaintext">permitted under the terms of Section 3.3).</span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="plaintext"></span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="plaintext">2.5. Representation</span>
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141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext"></span>
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142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="plaintext">Each Contributor represents that the Contributor believes its</span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext">Contributions are its original creation(s) or it has sufficient rights</span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext">to grant the rights to its Contributions conveyed by this License.</span>
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145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"></span>
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146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext">2.6. Fair Use</span>
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147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="plaintext"></span>
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148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext">This License is not intended to limit any rights You have under</span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="plaintext">applicable copyright doctrines of fair use, fair dealing, or other</span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext">equivalents.</span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext"></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="plaintext">2.7. Conditions</span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="plaintext"></span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext">Sections 3.1, 3.2, 3.3, and 3.4 are conditions of the licenses granted</span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="plaintext">in Section 2.1.</span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="plaintext"></span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="plaintext">3. Responsibilities</span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="plaintext">-------------------</span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="plaintext"></span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="plaintext">3.1. Distribution of Source Form</span>
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161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="plaintext"></span>
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162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext">All distribution of Covered Software in Source Code Form, including any</span>
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163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="plaintext">Modifications that You create or to which You contribute, must be under</span>
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="plaintext">the terms of this License. You must inform recipients that the Source</span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="plaintext">Code Form of the Covered Software is governed by the terms of this</span>
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166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="plaintext">License, and how they can obtain a copy of this License. You may not</span>
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167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="plaintext">attempt to alter or restrict the recipients' rights in the Source Code</span>
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168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="plaintext">Form.</span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="plaintext"></span>
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170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext">3.2. Distribution of Executable Form</span>
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171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="plaintext"></span>
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172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="plaintext">If You distribute Covered Software in Executable Form then:</span>
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173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext">(a) such Covered Software must also be made available in Source Code</span>
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<td class="new_line diff-line-num new" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext"> Form, as described in Section 3.1, and You must inform recipients of</span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="plaintext"> the Executable Form how they can obtain a copy of such Source Code</span>
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<td class="new_line diff-line-num new" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="plaintext"> Form by reasonable means in a timely manner, at a charge no more</span>
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<td class="new_line diff-line-num new" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="plaintext"> than the cost of distribution to the recipient; and</span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="plaintext"></span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="plaintext">(b) You may distribute such Executable Form under the terms of this</span>
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<td class="new_line diff-line-num new" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="plaintext"> License, or sublicense it under different terms, provided that the</span>
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<td class="new_line diff-line-num new" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="plaintext"> license for the Executable Form does not attempt to limit or alter</span>
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<td class="new_line diff-line-num new" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="plaintext"> the recipients' rights in the Source Code Form under this License.</span>
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<td class="new_line diff-line-num new" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="plaintext"></span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="plaintext">3.3. Distribution of a Larger Work</span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="plaintext">You may create and distribute a Larger Work under terms of Your choice,</span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext">provided that You also comply with the requirements of this License for</span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="plaintext">the Covered Software. If the Larger Work is a combination of Covered</span>
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<td class="new_line diff-line-num new" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="plaintext">Software with a work governed by one or more Secondary Licenses, and the</span>
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<td class="new_line diff-line-num new" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="plaintext">Covered Software is not Incompatible With Secondary Licenses, this</span>
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<td class="new_line diff-line-num new" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="plaintext">License permits You to additionally distribute such Covered Software</span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="plaintext">under the terms of such Secondary License(s), so that the recipient of</span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="plaintext">the Larger Work may, at their option, further distribute the Covered</span>
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<td class="new_line diff-line-num new" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext">Software under the terms of either this License or such Secondary</span>
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196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="plaintext">License(s).</span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="plaintext"></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="plaintext">3.4. Notices</span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="plaintext"></span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="plaintext">You may not remove or alter the substance of any license notices</span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="plaintext">(including copyright notices, patent notices, disclaimers of warranty,</span>
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202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="plaintext">or limitations of liability) contained within the Source Code Form of</span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="plaintext">the Covered Software, except that You may alter any license notices to</span>
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204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="plaintext">the extent required to remedy known factual inaccuracies.</span>
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205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="plaintext"></span>
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206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="plaintext">3.5. Application of Additional Terms</span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="plaintext"></span>
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208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="plaintext">You may choose to offer, and to charge a fee for, warranty, support,</span>
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<td class="new_line diff-line-num new" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="plaintext">indemnity or liability obligations to one or more recipients of Covered</span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="plaintext">Software. However, You may do so only on Your own behalf, and not on</span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext">behalf of any Contributor. You must make it absolutely clear that any</span>
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212
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="plaintext">such warranty, support, indemnity, or liability obligation is offered by</span>
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<td class="new_line diff-line-num new" data-linenumber="213" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
213
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="plaintext">You alone, and You hereby agree to indemnify every Contributor for any</span>
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<td class="new_line diff-line-num new" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
214
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="plaintext">liability incurred by such Contributor as a result of warranty, support,</span>
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<td class="new_line diff-line-num new" data-linenumber="215" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
215
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<pre style="margin: 0;">+<span id="LC215" class="line" lang="plaintext">indemnity or liability terms You offer. You may include additional</span>
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<td class="new_line diff-line-num new" data-linenumber="216" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
216
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="plaintext">disclaimers of warranty and limitations of liability specific to any</span>
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217
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="plaintext">jurisdiction.</span>
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218
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="plaintext">4. Inability to Comply Due to Statute or Regulation</span>
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220
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<pre style="margin: 0;">+<span id="LC220" class="line" lang="plaintext">---------------------------------------------------</span>
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221
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext"></span>
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222
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="plaintext">If it is impossible for You to comply with any of the terms of this</span>
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223
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<pre style="margin: 0;">+<span id="LC223" class="line" lang="plaintext">License with respect to some or all of the Covered Software due to</span>
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224
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<pre style="margin: 0;">+<span id="LC224" class="line" lang="plaintext">statute, judicial order, or regulation then You must: (a) comply with</span>
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225
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<pre style="margin: 0;">+<span id="LC225" class="line" lang="plaintext">the terms of this License to the maximum extent possible; and (b)</span>
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226
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<pre style="margin: 0;">+<span id="LC226" class="line" lang="plaintext">describe the limitations and the code they affect. Such description must</span>
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227
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<pre style="margin: 0;">+<span id="LC227" class="line" lang="plaintext">be placed in a text file included with all distributions of the Covered</span>
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228
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<pre style="margin: 0;">+<span id="LC228" class="line" lang="plaintext">Software under this License. Except to the extent prohibited by statute</span>
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229
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="plaintext">or regulation, such description must be sufficiently detailed for a</span>
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230
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="plaintext">recipient of ordinary skill to be able to understand it.</span>
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231
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<pre style="margin: 0;">+<span id="LC231" class="line" lang="plaintext"></span>
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232
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<pre style="margin: 0;">+<span id="LC232" class="line" lang="plaintext">5. Termination</span>
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<pre style="margin: 0;">+<span id="LC233" class="line" lang="plaintext">--------------</span>
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234
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<pre style="margin: 0;">+<span id="LC234" class="line" lang="plaintext"></span>
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235
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="plaintext">5.1. The rights granted under this License will terminate automatically</span>
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236
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext">if You fail to comply with any of its terms. However, if You become</span>
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237
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="plaintext">compliant, then the rights granted under this License from a particular</span>
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238
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<pre style="margin: 0;">+<span id="LC238" class="line" lang="plaintext">Contributor are reinstated (a) provisionally, unless and until such</span>
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239
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="plaintext">Contributor explicitly and finally terminates Your grants, and (b) on an</span>
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240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="plaintext">ongoing basis, if such Contributor fails to notify You of the</span>
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241
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="plaintext">non-compliance by some reasonable means prior to 60 days after You have</span>
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242
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<pre style="margin: 0;">+<span id="LC242" class="line" lang="plaintext">come back into compliance. Moreover, Your grants from a particular</span>
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243
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<pre style="margin: 0;">+<span id="LC243" class="line" lang="plaintext">Contributor are reinstated on an ongoing basis if such Contributor</span>
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<pre style="margin: 0;">+<span id="LC244" class="line" lang="plaintext">notifies You of the non-compliance by some reasonable means, this is the</span>
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245
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<pre style="margin: 0;">+<span id="LC245" class="line" lang="plaintext">first time You have received notice of non-compliance with this License</span>
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246
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="plaintext">from such Contributor, and You become compliant prior to 30 days after</span>
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247
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<pre style="margin: 0;">+<span id="LC247" class="line" lang="plaintext">Your receipt of the notice.</span>
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248
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<pre style="margin: 0;">+<span id="LC248" class="line" lang="plaintext"></span>
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249
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="plaintext">5.2. If You initiate litigation against any entity by asserting a patent</span>
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250
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<pre style="margin: 0;">+<span id="LC250" class="line" lang="plaintext">infringement claim (excluding declaratory judgment actions,</span>
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251
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<pre style="margin: 0;">+<span id="LC251" class="line" lang="plaintext">counter-claims, and cross-claims) alleging that a Contributor Version</span>
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252
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="plaintext">directly or indirectly infringes any patent, then the rights granted to</span>
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253
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<pre style="margin: 0;">+<span id="LC253" class="line" lang="plaintext">You by any and all Contributors for the Covered Software under Section</span>
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254
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<pre style="margin: 0;">+<span id="LC254" class="line" lang="plaintext">2.1 of this License shall terminate.</span>
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255
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<pre style="margin: 0;">+<span id="LC255" class="line" lang="plaintext"></span>
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256
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<pre style="margin: 0;">+<span id="LC256" class="line" lang="plaintext">5.3. In the event of termination under Sections 5.1 or 5.2 above, all</span>
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257
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="plaintext">end user license agreements (excluding distributors and resellers) which</span>
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258
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<pre style="margin: 0;">+<span id="LC258" class="line" lang="plaintext">have been validly granted by You or Your distributors under this License</span>
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259
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="plaintext">prior to termination shall survive termination.</span>
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260
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<pre style="margin: 0;">+<span id="LC260" class="line" lang="plaintext"></span>
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261
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<pre style="margin: 0;">+<span id="LC261" class="line" lang="plaintext">************************************************************************</span>
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262
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<pre style="margin: 0;">+<span id="LC262" class="line" lang="plaintext">* *</span>
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263
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<pre style="margin: 0;">+<span id="LC263" class="line" lang="plaintext">* 6. Disclaimer of Warranty *</span>
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264
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<pre style="margin: 0;">+<span id="LC264" class="line" lang="plaintext">* ------------------------- *</span>
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265
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<pre style="margin: 0;">+<span id="LC265" class="line" lang="plaintext">* *</span>
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266
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<pre style="margin: 0;">+<span id="LC266" class="line" lang="plaintext">* Covered Software is provided under this License on an "as is" *</span>
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<td class="new_line diff-line-num new" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
267
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="plaintext">* basis, without warranty of any kind, either expressed, implied, or *</span>
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<td class="new_line diff-line-num new" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
268
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<pre style="margin: 0;">+<span id="LC268" class="line" lang="plaintext">* statutory, including, without limitation, warranties that the *</span>
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<td class="new_line diff-line-num new" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
269
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<pre style="margin: 0;">+<span id="LC269" class="line" lang="plaintext">* Covered Software is free of defects, merchantable, fit for a *</span>
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270
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<pre style="margin: 0;">+<span id="LC270" class="line" lang="plaintext">* particular purpose or non-infringing. The entire risk as to the *</span>
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<td class="new_line diff-line-num new" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
271
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<pre style="margin: 0;">+<span id="LC271" class="line" lang="plaintext">* quality and performance of the Covered Software is with You. *</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
272
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<pre style="margin: 0;">+<span id="LC272" class="line" lang="plaintext">* Should any Covered Software prove defective in any respect, You *</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
273
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="plaintext">* (not any Contributor) assume the cost of any necessary servicing, *</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
274
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<pre style="margin: 0;">+<span id="LC274" class="line" lang="plaintext">* repair, or correction. This disclaimer of warranty constitutes an *</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
275
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="plaintext">* essential part of this License. No use of any Covered Software is *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
276
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="plaintext">* authorized under this License except under this disclaimer. *</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="277" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
277
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<pre style="margin: 0;">+<span id="LC277" class="line" lang="plaintext">* *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="278" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
278
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<pre style="margin: 0;">+<span id="LC278" class="line" lang="plaintext">************************************************************************</span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="279" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
279
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="plaintext"></span>
</pre>
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<td class="new_line diff-line-num new" data-linenumber="280" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
280
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<pre style="margin: 0;">+<span id="LC280" class="line" lang="plaintext">************************************************************************</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="281" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
281
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC281" class="line" lang="plaintext">* *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="282" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
282
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<pre style="margin: 0;">+<span id="LC282" class="line" lang="plaintext">* 7. Limitation of Liability *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="283" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
283
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<pre style="margin: 0;">+<span id="LC283" class="line" lang="plaintext">* -------------------------- *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="284" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
284
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<pre style="margin: 0;">+<span id="LC284" class="line" lang="plaintext">* *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="285" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
285
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<pre style="margin: 0;">+<span id="LC285" class="line" lang="plaintext">* Under no circumstances and under no legal theory, whether tort *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="286" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
286
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<pre style="margin: 0;">+<span id="LC286" class="line" lang="plaintext">* (including negligence), contract, or otherwise, shall any *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="287" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
287
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<pre style="margin: 0;">+<span id="LC287" class="line" lang="plaintext">* Contributor, or anyone who distributes Covered Software as *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="288" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
288
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<pre style="margin: 0;">+<span id="LC288" class="line" lang="plaintext">* permitted above, be liable to You for any direct, indirect, *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="289" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
289
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<pre style="margin: 0;">+<span id="LC289" class="line" lang="plaintext">* special, incidental, or consequential damages of any character *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="290" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
290
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<pre style="margin: 0;">+<span id="LC290" class="line" lang="plaintext">* including, without limitation, damages for lost profits, loss of *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="291" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
291
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC291" class="line" lang="plaintext">* goodwill, work stoppage, computer failure or malfunction, or any *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="292" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
292
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<pre style="margin: 0;">+<span id="LC292" class="line" lang="plaintext">* and all other commercial damages or losses, even if such party *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
293
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<pre style="margin: 0;">+<span id="LC293" class="line" lang="plaintext">* shall have been informed of the possibility of such damages. This *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
294
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="plaintext">* limitation of liability shall not apply to liability for death or *</span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="295" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
295
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<pre style="margin: 0;">+<span id="LC295" class="line" lang="plaintext">* personal injury resulting from such party's negligence to the *</span>
</pre>
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296
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<pre style="margin: 0;">+<span id="LC296" class="line" lang="plaintext">* extent applicable law prohibits such limitation. Some *</span>
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297
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="plaintext">* jurisdictions do not allow the exclusion or limitation of *</span>
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298
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<pre style="margin: 0;">+<span id="LC298" class="line" lang="plaintext">* incidental or consequential damages, so this exclusion and *</span>
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299
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="plaintext">* limitation may not apply to You. *</span>
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300
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<pre style="margin: 0;">+<span id="LC300" class="line" lang="plaintext">* *</span>
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301
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<pre style="margin: 0;">+<span id="LC301" class="line" lang="plaintext">************************************************************************</span>
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302
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<pre style="margin: 0;">+<span id="LC302" class="line" lang="plaintext"></span>
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303
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<pre style="margin: 0;">+<span id="LC303" class="line" lang="plaintext">8. Litigation</span>
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304
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<pre style="margin: 0;">+<span id="LC304" class="line" lang="plaintext">-------------</span>
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305
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<pre style="margin: 0;">+<span id="LC305" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
306
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<pre style="margin: 0;">+<span id="LC306" class="line" lang="plaintext">Any litigation relating to this License may be brought only in the</span>
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307
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<pre style="margin: 0;">+<span id="LC307" class="line" lang="plaintext">courts of a jurisdiction where the defendant maintains its principal</span>
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308
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<pre style="margin: 0;">+<span id="LC308" class="line" lang="plaintext">place of business and such litigation shall be governed by laws of that</span>
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="plaintext">jurisdiction, without reference to its conflict-of-law provisions.</span>
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310
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="plaintext">Nothing in this Section shall prevent a party's ability to bring</span>
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311
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<pre style="margin: 0;">+<span id="LC311" class="line" lang="plaintext">cross-claims or counter-claims.</span>
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312
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<pre style="margin: 0;">+<span id="LC312" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="plaintext">9. Miscellaneous</span>
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314
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<pre style="margin: 0;">+<span id="LC314" class="line" lang="plaintext">----------------</span>
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315
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<pre style="margin: 0;">+<span id="LC315" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC316" class="line" lang="plaintext">This License represents the complete agreement concerning the subject</span>
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317
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<pre style="margin: 0;">+<span id="LC317" class="line" lang="plaintext">matter hereof. If any provision of this License is held to be</span>
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<pre style="margin: 0;">+<span id="LC318" class="line" lang="plaintext">unenforceable, such provision shall be reformed only to the extent</span>
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319
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<pre style="margin: 0;">+<span id="LC319" class="line" lang="plaintext">necessary to make it enforceable. Any law or regulation which provides</span>
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320
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<pre style="margin: 0;">+<span id="LC320" class="line" lang="plaintext">that the language of a contract shall be construed against the drafter</span>
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321
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<pre style="margin: 0;">+<span id="LC321" class="line" lang="plaintext">shall not be used to construe this License against a Contributor.</span>
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322
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<pre style="margin: 0;">+<span id="LC322" class="line" lang="plaintext"></span>
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323
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<pre style="margin: 0;">+<span id="LC323" class="line" lang="plaintext">10. Versions of the License</span>
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324
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<pre style="margin: 0;">+<span id="LC324" class="line" lang="plaintext">---------------------------</span>
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325
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<pre style="margin: 0;">+<span id="LC325" class="line" lang="plaintext"></span>
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326
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<pre style="margin: 0;">+<span id="LC326" class="line" lang="plaintext">10.1. New Versions</span>
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327
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<pre style="margin: 0;">+<span id="LC327" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="328" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
328
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<pre style="margin: 0;">+<span id="LC328" class="line" lang="plaintext">Mozilla Foundation is the license steward. Except as provided in Section</span>
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329
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<pre style="margin: 0;">+<span id="LC329" class="line" lang="plaintext">10.3, no one other than the license steward has the right to modify or</span>
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330
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<pre style="margin: 0;">+<span id="LC330" class="line" lang="plaintext">publish new versions of this License. Each version will be given a</span>
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331
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<pre style="margin: 0;">+<span id="LC331" class="line" lang="plaintext">distinguishing version number.</span>
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332
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<pre style="margin: 0;">+<span id="LC332" class="line" lang="plaintext"></span>
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333
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<pre style="margin: 0;">+<span id="LC333" class="line" lang="plaintext">10.2. Effect of New Versions</span>
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334
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<pre style="margin: 0;">+<span id="LC334" class="line" lang="plaintext"></span>
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335
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<pre style="margin: 0;">+<span id="LC335" class="line" lang="plaintext">You may distribute the Covered Software under the terms of the version</span>
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336
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<pre style="margin: 0;">+<span id="LC336" class="line" lang="plaintext">of the License under which You originally received the Covered Software,</span>
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337
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<pre style="margin: 0;">+<span id="LC337" class="line" lang="plaintext">or under the terms of any subsequent version published by the license</span>
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338
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<pre style="margin: 0;">+<span id="LC338" class="line" lang="plaintext">steward.</span>
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339
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<pre style="margin: 0;">+<span id="LC339" class="line" lang="plaintext"></span>
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340
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<pre style="margin: 0;">+<span id="LC340" class="line" lang="plaintext">10.3. Modified Versions</span>
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341
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<pre style="margin: 0;">+<span id="LC341" class="line" lang="plaintext"></span>
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342
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<pre style="margin: 0;">+<span id="LC342" class="line" lang="plaintext">If you create software not governed by this License, and you want to</span>
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343
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<pre style="margin: 0;">+<span id="LC343" class="line" lang="plaintext">create a new license for such software, you may create and use a</span>
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344
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<pre style="margin: 0;">+<span id="LC344" class="line" lang="plaintext">modified version of this License if you rename the license and remove</span>
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345
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<pre style="margin: 0;">+<span id="LC345" class="line" lang="plaintext">any references to the name of the license steward (except to note that</span>
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346
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<pre style="margin: 0;">+<span id="LC346" class="line" lang="plaintext">such modified license differs from this License).</span>
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347
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<pre style="margin: 0;">+<span id="LC347" class="line" lang="plaintext"></span>
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348
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<pre style="margin: 0;">+<span id="LC348" class="line" lang="plaintext">10.4. Distributing Source Code Form that is Incompatible With Secondary</span>
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349
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<pre style="margin: 0;">+<span id="LC349" class="line" lang="plaintext">Licenses</span>
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350
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<pre style="margin: 0;">+<span id="LC350" class="line" lang="plaintext"></span>
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351
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<pre style="margin: 0;">+<span id="LC351" class="line" lang="plaintext">If You choose to distribute Source Code Form that is Incompatible With</span>
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352
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<pre style="margin: 0;">+<span id="LC352" class="line" lang="plaintext">Secondary Licenses under the terms of this version of the License, the</span>
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353
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<pre style="margin: 0;">+<span id="LC353" class="line" lang="plaintext">notice described in Exhibit B of this License must be attached.</span>
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354
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<pre style="margin: 0;">+<span id="LC354" class="line" lang="plaintext"></span>
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355
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<pre style="margin: 0;">+<span id="LC355" class="line" lang="plaintext">Exhibit A - Source Code Form License Notice</span>
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356
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<pre style="margin: 0;">+<span id="LC356" class="line" lang="plaintext">-------------------------------------------</span>
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357
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<pre style="margin: 0;">+<span id="LC357" class="line" lang="plaintext"></span>
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358
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<pre style="margin: 0;">+<span id="LC358" class="line" lang="plaintext"> This Source Code Form is subject to the terms of the Mozilla Public</span>
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359
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<pre style="margin: 0;">+<span id="LC359" class="line" lang="plaintext"> License, v. 2.0. If a copy of the MPL was not distributed with this</span>
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360
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<pre style="margin: 0;">+<span id="LC360" class="line" lang="plaintext"> file, You can obtain one at http://mozilla.org/MPL/2.0/.</span>
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361
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<pre style="margin: 0;">+<span id="LC361" class="line" lang="plaintext"></span>
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362
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<pre style="margin: 0;">+<span id="LC362" class="line" lang="plaintext">If it is not possible or desirable to put the notice in a particular</span>
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363
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<pre style="margin: 0;">+<span id="LC363" class="line" lang="plaintext">file, then You may include the notice in a location (such as a LICENSE</span>
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364
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<pre style="margin: 0;">+<span id="LC364" class="line" lang="plaintext">file in a relevant directory) where a recipient would be likely to look</span>
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365
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<pre style="margin: 0;">+<span id="LC365" class="line" lang="plaintext">for such a notice.</span>
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366
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<pre style="margin: 0;">+<span id="LC366" class="line" lang="plaintext"></span>
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367
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<pre style="margin: 0;">+<span id="LC367" class="line" lang="plaintext">You may add additional accurate notices of copyright ownership.</span>
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368
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<pre style="margin: 0;">+<span id="LC368" class="line" lang="plaintext"></span>
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369
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<pre style="margin: 0;">+<span id="LC369" class="line" lang="plaintext">Exhibit B - "Incompatible With Secondary Licenses" Notice</span>
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370
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<pre style="margin: 0;">+<span id="LC370" class="line" lang="plaintext">---------------------------------------------------------</span>
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371
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<pre style="margin: 0;">+<span id="LC371" class="line" lang="plaintext"></span>
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372
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<pre style="margin: 0;">+<span id="LC372" class="line" lang="plaintext"> This Source Code Form is "Incompatible With Secondary Licenses", as</span>
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373
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<pre style="margin: 0;">+<span id="LC373" class="line" lang="plaintext"> defined by the Mozilla Public License, v. 2.0.</span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d"><strong>README.md</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -72,6 +72,6 @@ Then configure the project using:</td>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> git submodule update <span class="nt" style="color: #000080;">--init</span></span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> <span class="nb" style="color: #0086b3;">mkdir </span>build</span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> <span class="nb" style="color: #0086b3;">cd </span>build</span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> cmake <span class="nt" style="color: #000080;">-D</span> <span class="nv" style="color: #008080;"><span class="idiff left right">ENABLE_CONA</span>N</span><span class="o" style="font-weight: 600;">=</span>OFF ..</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> cmake <span class="nt" style="color: #000080;">-D</span> <span class="nv" style="color: #008080;"><span class="idiff left">CMAKE_BUILD_TYPE</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="idiff">Release </span><span class="nt" style="color: #000080;"><span class="idiff">-D</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">ENABLE_CONAN</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="idiff">OFF </span><span class="nt" style="color: #000080;"><span class="idiff">-D</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff">ENABLE_PERF_TESTING</span></span><span class="o" style="font-weight: 600;"><span class="idiff">=</span></span><span class="idiff">OFF </span><span class="nt" style="color: #000080;"><span class="idiff">-D</span></span><span class="idiff"> </span><span class="nv" style="color: #008080;"><span class="idiff right">ENABLE_PYTHO</span>N</span><span class="o" style="font-weight: 600;">=</span>OFF ..</span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="markdown"><span class="o" style="font-weight: 600;">></span> make <span class="nt" style="color: #000080;">-j</span></span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="markdown"><span class="p">```</span></span></pre>
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<td class="line_content match" style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">\ No newline at end of file</td>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="markdown"><span class="p">```</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#09d6101be8561dfd1d2651a9b0411f2baa8dff3f"><strong>cmake/FindHDF5.cmake</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>ONTFindModuleHelpers<span class="p">)</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_known_components</span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="cmake"> Z</span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="cmake"> C</span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="cmake"> CXX</span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="cmake"> HL</span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="cmake"> HL_CXX</span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="cmake"> Tools</span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="cmake"><span class="p">)</span></span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">foreach</span><span class="p">(</span>_comp <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_known_components</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_comp</span><span class="si" style="color: #d14;">}</span>_compile_opts <span class="s2" style="color: #d14;">"-DH5_BUILT_AS_DYNAMIC_LIB=1"</span><span class="p">)</span></span>
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13
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endforeach</span><span class="p">()</span></span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="cmake"></span>
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15
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Z_compile_opts <span class="s2" style="color: #d14;">""</span><span class="p">)</span></span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Z_lib_names_debug <span class="s2" style="color: #d14;">"zlibd;zd"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
17
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Z_lib_names_release <span class="s2" style="color: #d14;">"zlib;z"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
18
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Z_component_deps<span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
19
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="cmake"></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
20
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_C_lib_names_release <span class="s2" style="color: #d14;">"hdf5"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
21
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_C_header_names <span class="s2" style="color: #d14;">"hdf5.h"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
22
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_C_component_deps Z<span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
23
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="cmake"></span>
</pre>
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24
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_CXX_lib_names_release <span class="s2" style="color: #d14;">"hdf5_cpp"</span><span class="p">)</span></span>
</pre>
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25
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_CXX_header_names <span class="s2" style="color: #d14;">"H5Cpp.h"</span><span class="p">)</span></span>
</pre>
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26
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_CXX_component_deps C<span class="p">)</span></span>
</pre>
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27
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="cmake"></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
28
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_lib_names_release <span class="s2" style="color: #d14;">"hdf5_hl"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
29
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_header_names <span class="s2" style="color: #d14;">"hdf5_hl.h"</span><span class="p">)</span></span>
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30
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_component_deps C<span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
31
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="cmake"></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
32
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_CXX_lib_names_release <span class="s2" style="color: #d14;">"hdf5_hl_cpp"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_CXX_header_names <span class="s2" style="color: #d14;">"H5PacketTable.h"</span><span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
34
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_HL_CXX_component_deps HL CXX<span class="p">)</span></span>
</pre>
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<td class="old_line diff-line-num old" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
35
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Tools_lib_names_release <span class="s2" style="color: #d14;">"hdf5_tools"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Tools_header_names <span class="s2" style="color: #d14;">"h5tools.h"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_Tools_component_deps C<span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">foreach</span><span class="p">(</span>_comp <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_known_components</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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41
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span><span class="p">(</span>NOT _comp STREQUAL <span class="s2" style="color: #d14;">"Z"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_comp</span><span class="si" style="color: #d14;">}</span>_lib_names_debug<span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">foreach</span><span class="p">(</span>_name <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_comp</span><span class="si" style="color: #d14;">}</span><span class="nv" style="color: #008080;">_lib_names_release</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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44
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>APPEND HDF5_<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_comp</span><span class="si" style="color: #d14;">}</span>_lib_names_debug <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_name</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">_D"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endforeach</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endforeach</span><span class="p">()</span></span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">ont_find_package_parse_components</span><span class="p">(</span>HDF5</span>
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50
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="cmake"> RESULT_VAR HDF5_components</span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="cmake"> KNOWN_COMPONENTS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_known_components</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">ont_find_package_handle_library_components</span><span class="p">(</span>HDF5</span>
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54
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="cmake"> COMPONENTS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_components</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="cmake"> DEBUG_AND_RELEASE</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="cmake"> SKIP_PKG_CONFIG</span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="cmake"></span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">find_path</span><span class="p">(</span>HDF5_INCLUDE_DIR</span>
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60
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="cmake"> NAMES H5public.h</span>
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<td class="old_line diff-line-num old" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
61
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="cmake"> HINTS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">PKG_HDF5_C_INCLUDE_DIRS</span><span class="si" style="color: #d14;">}</span> </span>
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62
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="cmake"><span class="p">)</span></span>
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63
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">mark_as_advanced</span><span class="p">(</span>HDF5_INCLUDE_DIR<span class="p">)</span></span>
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64
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span><span class="p">(</span>HDF5_INCLUDE_DIR AND EXISTS <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_INCLUDE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/H5public.h"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
65
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_PUBLIC_HEADER <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_INCLUDE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/H5public.h"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
66
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">file</span><span class="p">(</span>STRINGS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_PUBLIC_HEADER</span><span class="si" style="color: #d14;">}</span> _hdf5_version_lines</span>
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<td class="old_line diff-line-num old" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
67
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<pre style="margin: 0;">-<span id="LC67" class="line" lang="cmake"> REGEX <span class="s2" style="color: #d14;">"^#define[ </span><span class="se" style="color: #d14;">\t</span><span class="s2" style="color: #d14;">]+H5_VERS"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
68
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">string</span><span class="p">(</span>REGEX MATCH <span class="s2" style="color: #d14;">"H5_VERS_MAJOR[</span><span class="se" style="color: #d14;">\t</span><span class="s2" style="color: #d14;"> ]+([0-9]+)"</span> _dummy <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_lines</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="69" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
69
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_hdf5_version_major <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_MATCH_1</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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70
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">string</span><span class="p">(</span>REGEX MATCH <span class="s2" style="color: #d14;">"H5_VERS_MINOR[</span><span class="se" style="color: #d14;">\t</span><span class="s2" style="color: #d14;"> ]+([0-9]+)"</span> _dummy <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_lines</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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71
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<pre style="margin: 0;">-<span id="LC71" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_hdf5_version_minor <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_MATCH_1</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
72
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">string</span><span class="p">(</span>REGEX MATCH <span class="s2" style="color: #d14;">"H5_VERS_RELEASE[</span><span class="se" style="color: #d14;">\t</span><span class="s2" style="color: #d14;"> ]+([0-9]+)"</span> _dummy <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_lines</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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73
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_hdf5_version_release <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_MATCH_1</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
74
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">unset</span><span class="p">(</span>_hdf5_version_lines<span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
75
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>HDF5_VERSION <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_major</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">.</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_minor</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">.</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_hdf5_version_release</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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76
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<pre style="margin: 0;">-<span id="LC76" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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77
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="cmake"></span>
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78
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">include</span><span class="p">(</span>FindPackageHandleStandardArgs<span class="p">)</span></span>
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<td class="old_line diff-line-num old" data-linenumber="79" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
79
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="cmake"><span class="nf" style="color: #900; font-weight: 600;">find_package_handle_standard_args</span><span class="p">(</span>HDF5</span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="cmake"> FOUND_VAR</span>
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<pre style="margin: 0;">-<span id="LC81" class="line" lang="cmake"> HDF5_FOUND</span>
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<pre style="margin: 0;">-<span id="LC82" class="line" lang="cmake"> REQUIRED_VARS</span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="cmake"> HDF5_LIBRARIES</span>
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<pre style="margin: 0;">-<span id="LC84" class="line" lang="cmake"> HDF5_INCLUDE_DIR</span>
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<pre style="margin: 0;">-<span id="LC85" class="line" lang="cmake"> VERSION_VAR</span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="cmake"> HDF5_VERSION</span>
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="cmake"> HANDLE_COMPONENTS</span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#1f03a45b2333b3e3931d694cb1a25d293c02c888"><strong>cmake/SignFile.cmake</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>file_to_sign <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_ARGV3</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="cmake"><span class="c1" style="color: #998; font-style: italic;"># Pull from command line by default - otherwise require an environment variable.</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT MINKNOW_CODE_SIGN_IDENTITY<span class="p">)</span></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span><span class="s2" style="color: #d14;">"$ENV{MINKNOW_CODE_SIGN_IDENTITY}"</span> STREQUAL <span class="s2" style="color: #d14;">""</span><span class="p">)</span></span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Caller must specify code sign identiyy in environment variable 'MINKNOW_CODE_SIGN_IDENTITY'"</span><span class="p">)</span></span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="cmake"></span>
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9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>MINKNOW_CODE_SIGN_IDENTITY <span class="s2" style="color: #d14;">"$ENV{MINKNOW_CODE_SIGN_IDENTITY}"</span><span class="p">)</span></span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>APPLE<span class="p">)</span></span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span><span class="s2" style="color: #d14;">"Signing file... </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">file_to_sign</span><span class="si" style="color: #d14;">}${</span><span class="nv" style="color: #008080;">keychain_comment</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>SIGN_COMMAND </span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="cmake"> codesign -s <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">MINKNOW_CODE_SIGN_IDENTITY</span><span class="si" style="color: #d14;">}</span> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">keychain_arg</span><span class="si" style="color: #d14;">}</span> --force --deep -vvvv <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">file_to_sign</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">elseif</span><span class="p">(</span>WIN32<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">find_program</span><span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="cmake"> SIGNTOOL_EXE <span class="s2" style="color: #d14;">"Signtool.exe"</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="cmake"> PATHS <span class="s2" style="color: #d14;">"C:</span><span class="se" style="color: #d14;">\\</span><span class="s2" style="color: #d14;">Program Files (x86)</span><span class="se" style="color: #d14;">\\</span><span class="s2" style="color: #d14;">Windows Kits</span><span class="se" style="color: #d14;">\\</span><span class="s2" style="color: #d14;">10</span><span class="se" style="color: #d14;">\\</span><span class="s2" style="color: #d14;">App Certification Kit"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT SIGNTOOL_EXE<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Failed to find signtool executable"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span><span class="s2" style="color: #d14;">"Signing file... </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">file_to_sign</span><span class="si" style="color: #d14;">}${</span><span class="nv" style="color: #008080;">comment</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>SIGN_COMMAND <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">SIGNTOOL_EXE</span><span class="si" style="color: #d14;">}</span> sign <span class="s2" style="color: #d14;">"/v"</span> <span class="s2" style="color: #d14;">"/sha1"</span> <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">MINKNOW_CODE_SIGN_IDENTITY</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="cmake"> <span class="s2" style="color: #d14;">"/t"</span> <span class="s2" style="color: #d14;">"http://timestamp.globalsign.com/scripts/"</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">file_to_sign</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="cmake"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">else</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Cannot sign code on this platform."</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">message</span><span class="p">(</span><span class="s2" style="color: #d14;">"Running sign command: </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">SIGN_COMMAND</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">execute_process</span><span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="cmake"> COMMAND <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">SIGN_COMMAND</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="cmake"> RESULT_VARIABLE result</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="cmake"> OUTPUT_VARIABLE output</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="cmake"> ERROR_VARIABLE output</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT result EQUAL 0<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Could not sign file: </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">result</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">: </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">output</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">else</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span><span class="s2" style="color: #d14;">"Signed file: </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">output</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#61b8058db2cdf3567f94a73875e8a35c244e669e"><strong>cmake/SigningUtils.cmake</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">function</span><span class="p">(</span>hdf_add_signing_command target<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>options<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>oneValArgs FILE<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>multiValArgs<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">cmake_parse_arguments</span><span class="p">(</span>ARG <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">options</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span> <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">oneValArgs</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span> <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">multiValArgs</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">ARGN</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>ARG_UNPARSED_ARGUMENTS<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Unexpected arguments to hdf_add_signing_command: </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">ARG_UNPARSED_ARGUMENTS</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT APPLE AND NOT WIN32<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"hdf_add_signing_command called on unsupported platform - platform=</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SYSTEM_NAME</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">, target=</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">target</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="cmake"></span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT ARG_FILE<span class="p">)</span></span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>ARG_FILE $<TARGET_FILE:<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">target</span><span class="si" style="color: #d14;">}</span>><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="cmake"></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">add_custom_command</span><span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="cmake"> TARGET <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">target</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="cmake"> POST_BUILD</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="cmake"> COMMAND <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_COMMAND</span><span class="si" style="color: #d14;">}</span> -P <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF_PLUGIN_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span>/cmake/SignFile.cmake <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">ARG_FILE</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="cmake"> COMMENT <span class="s2" style="color: #d14;">"Signing </span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">target</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="cmake"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endfunction</span><span class="p">()</span></span></pre>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -195,6 +195,19 @@ function(conan_cmake_settings result)</td>
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">elseif</span><span class="p">(</span>CMAKE_VS_PLATFORM_TOOLSET <span class="nf" style="color: #900; font-weight: 600;">AND</span> <span class="p">(</span>CMAKE_GENERATOR STREQUAL <span class="s2" style="color: #d14;">"Ninja"</span><span class="p">))</span></span>
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196
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_SETTINGS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_SETTINGS</span><span class="si" style="color: #d14;">}</span> -s compiler.toolset=<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_VS_PLATFORM_TOOLSET</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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197
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="cmake"> <span class="c1" style="color: #998; font-style: italic;"># Temp fix due to https://github.com/conan-io/cmake-conan/issues/166</span></span>
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199
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<pre style="margin: 0;">+<span id="LC199" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">elseif</span> <span class="p">(</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">LANGUAGE</span><span class="si" style="color: #d14;">}</span><span class="nv" style="color: #008080;">_COMPILER_ID</span><span class="si" style="color: #d14;">}</span> STREQUAL Intel<span class="p">)</span></span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">string</span><span class="p">(</span>REPLACE <span class="s2" style="color: #d14;">"."</span> <span class="s2" style="color: #d14;">";"</span> VERSION_LIST <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">LANGUAGE</span><span class="si" style="color: #d14;">}</span><span class="nv" style="color: #008080;">_COMPILER_VERSION</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="201" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>GET VERSION_LIST 0 MAJOR<span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
202
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<pre style="margin: 0;">+<span id="LC202" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">list</span><span class="p">(</span>GET VERSION_LIST 1 MINOR<span class="p">)</span></span>
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203
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<pre style="margin: 0;">+<span id="LC203" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>COMPILER_VERSION <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">MAJOR</span><span class="si" style="color: #d14;">}</span>.<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">MINOR</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
204
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<pre style="margin: 0;">+<span id="LC204" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_CONAN_SETTING_COMPILER icc<span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
205
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_CONAN_SETTING_COMPILER_VERSION <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">COMPILER_VERSION</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
206
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<pre style="margin: 0;">+<span id="LC206" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_SETTINGS <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_SETTINGS</span><span class="si" style="color: #d14;">}</span> -s compiler=icc -s compiler.version=<span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">COMPILER_VERSION</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="207" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>USING_CXX<span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
208
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<pre style="margin: 0;">+<span id="LC208" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">conan_cmake_detect_gnu_libcxx</span><span class="p">(</span>_LIBCXX<span class="p">)</span></span>
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<td class="new_line diff-line-num new" data-linenumber="209" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>_CONAN_SETTING_COMPILER_LIBCXX <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">_LIBCXX</span><span class="si" style="color: #d14;">}</span><span class="p">)</span></span>
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210
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<pre style="margin: 0;">+<span id="LC210" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span> <span class="p">()</span></span>
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198
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<td class="new_line diff-line-num" data-linenumber="211" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
211
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">else</span><span class="p">()</span></span>
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199
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<td class="new_line diff-line-num" data-linenumber="212" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
212
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">message</span><span class="p">(</span>FATAL_ERROR <span class="s2" style="color: #d14;">"Conan: compiler setup not recognized"</span><span class="p">)</span></span>
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200
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213
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#73c403c4b40d4c36b2715f77c408460e0f5fd40c"><strong>conanfile.txt</strong>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">[requires]</span>
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2
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">zstd/1.3.4@nanopore/stable</span>
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3
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">google-benchmark/1.5@nanopore/stable</span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"></span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">[generators]</span>
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6
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">cmake</span>
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7
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">json</span>
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8
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<td class="new_line diff-line-num old" data-linenumber="0" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"></span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">[imports]</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"># Copy runtime files to the bin folder</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">bin, *.dll -> ../bin</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext">lib, *.dylib* -> ../bin</span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#930ff9e732755d92ad4ffb21bc49b7e5e3e6ad46"><strong>license.txt</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">The vbz-plugin software is provided under the Terms and Conditions of the Nanopore Community.</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">These are available on the Oxford Nanopore Technologies website (https://nanoporetech.com) and</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">also inthe included pdf file, "Nanopore Community TCs 09 September 2016.pdf".</span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#59555a82808408a732151d8289dc6e696db3e081"><strong>packaging/hdf_plugin_packaging.cmake</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,7 +7,7 @@ set(CPACK_PACKAGE_VERSION "${PROJECT_VERSION}")</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>NOT VBZ_BUILD_ARCHIVE<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CPACK_PACKAGE_DESCRIPTION_FILE <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/packaging/readme.txt"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CPACK_RESOURCE_FILE_README <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/packaging/readme.txt"</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CPACK_RESOURCE_FILE_LICENSE <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/<span class="idiff left right">license</span>.txt"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>CPACK_RESOURCE_FILE_LICENSE <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/<span class="idiff left right">LICENCE</span>.txt"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="cmake"> </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">cpack_add_component</span><span class="p">(</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cmake"> hdf_plugin</span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#4a76672f5d4bdb708af5fd2c48f4f868b16cb200"><strong>python/fast5compress/fast5vbz.py</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#!/usr/bin/env python3</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="python"><span class="s" style="color: #d14;">"""</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="python"><span class="s" style="color: #d14;">Fast5 compression filter for demonstrating vbz compression</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="python"><span class="s" style="color: #d14;">"""</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">os</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">h5py</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">argparse</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">shutil</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">copy2</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"><span class="n" style="color: #333;">__version__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"0.1.1"</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">compress_fast5</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="n" style="color: #333;">output_suffix</span><span class="p">,</span> <span class="n" style="color: #333;">vbz_version</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span> <span class="n" style="color: #333;">decompress</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="python"> <span class="s" style="color: #d14;">"""</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"><span class="s" style="color: #d14;"> (De)compress the raw signal in the fast5</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python"><span class="s" style="color: #d14;"> """</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># create a copy of the input file for compressing</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="python"> <span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">os</span><span class="p">.</span><span class="n" style="color: #333;">path</span><span class="p">.</span><span class="n" style="color: #333;">abspath</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"> <span class="n" style="color: #333;">out_filename</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">filename</span> <span class="o" style="font-weight: 600;">+</span> <span class="n" style="color: #333;">output_suffix</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="python"> <span class="n" style="color: #333;">copy2</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="n" style="color: #333;">out_filename</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># open the copy and compress the signal datasets only</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">h5py</span><span class="p">.</span><span class="n" style="color: #333;">File</span><span class="p">(</span><span class="n" style="color: #333;">out_filename</span><span class="p">,</span> <span class="s" style="color: #d14;">'r+'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fast5</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">decompress</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">compression_opts</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="python"> <span class="s" style="color: #d14;">"compression"</span><span class="p">:</span> <span class="s" style="color: #d14;">"gzip"</span><span class="p">,</span> <span class="s" style="color: #d14;">"compression_opts"</span><span class="p">:</span> <span class="mi" style="color: #099;">1</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="python"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="python"> <span class="k" style="font-weight: 600;">else</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="python"> <span class="n" style="color: #333;">compression_opts</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="python"> <span class="s" style="color: #d14;">"compression"</span><span class="p">:</span> <span class="mi" style="color: #099;">32020</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># 2 byte integers with zig zag + level 1 zstd</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="python"> <span class="s" style="color: #d14;">"compression_opts"</span><span class="p">:</span> <span class="p">(</span><span class="n" style="color: #333;">vbz_version</span><span class="p">,</span> <span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">)</span> </span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python"> <span class="p">}</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># multi read files</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">read</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">fast5</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python"> <span class="k" style="font-weight: 600;">if</span> <span class="ow" style="font-weight: 600;">not</span> <span class="n" style="color: #333;">read</span><span class="p">.</span><span class="n" style="color: #333;">startswith</span><span class="p">(</span><span class="s" style="color: #d14;">"read_"</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="python"> <span class="k" style="font-weight: 600;">continue</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># read the signal dataset</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="python"> <span class="n" style="color: #333;">group</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'%s/Raw/'</span> <span class="o" style="font-weight: 600;">%</span> <span class="n" style="color: #333;">read</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="python"> <span class="n" style="color: #333;">raw</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">fast5</span><span class="p">[</span><span class="n" style="color: #333;">group</span><span class="p">][</span><span class="s" style="color: #d14;">"Signal"</span><span class="p">][:]</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="python"> </span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># remove the dataset</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="python"> <span class="k" style="font-weight: 600;">del</span> <span class="n" style="color: #333;">fast5</span><span class="p">[</span><span class="n" style="color: #333;">group</span><span class="p">][</span><span class="s" style="color: #d14;">"Signal"</span><span class="p">]</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># store the dataset with the new compression</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="python"> <span class="n" style="color: #333;">fast5</span><span class="p">[</span><span class="n" style="color: #333;">group</span><span class="p">].</span><span class="n" style="color: #333;">create_dataset</span><span class="p">(</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="python"> <span class="s" style="color: #d14;">"Signal"</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="python"> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">raw</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="python"> <span class="o" style="font-weight: 600;">**</span><span class="n" style="color: #333;">compression_opts</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="python"> <span class="n" style="color: #333;">chunks</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="nb" style="color: #0086b3;">len</span><span class="p">(</span><span class="n" style="color: #333;">raw</span><span class="p">),)</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="python"> <span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">out_filename</span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">main</span><span class="p">(</span><span class="n" style="color: #333;">args</span><span class="p">,</span> <span class="n" style="color: #333;">print_help</span><span class="p">):</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="python"> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">filename</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">files</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="python"> <span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="n" style="color: #333;">compress_fast5</span><span class="p">(</span><span class="n" style="color: #333;">filename</span><span class="p">,</span> <span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">output_suffix</span><span class="p">,</span> <span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">vbz_version</span><span class="p">,</span> <span class="n" style="color: #333;">args</span><span class="p">.</span><span class="n" style="color: #333;">decompress</span><span class="p">))</span></span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="python"></span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="python"><span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">__name__</span> <span class="o" style="font-weight: 600;">==</span> <span class="s" style="color: #d14;">"__main__"</span><span class="p">:</span></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="python"> <span class="n" style="color: #333;">parser</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">argparse</span><span class="p">.</span><span class="n" style="color: #333;">ArgumentParser</span><span class="p">(</span><span class="s" style="color: #d14;">"fast5compress"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'files'</span><span class="p">,</span> <span class="n" style="color: #333;">nargs</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'*'</span><span class="p">,</span> <span class="n" style="color: #333;">help</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'input files'</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">"-d"</span><span class="p">,</span> <span class="s" style="color: #d14;">"--decompress"</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"store_true"</span><span class="p">,</span> <span class="n" style="color: #333;">default</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">"-s"</span><span class="p">,</span> <span class="s" style="color: #d14;">"--output-suffix"</span><span class="p">,</span> <span class="n" style="color: #333;">default</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">".tmp"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'-v'</span><span class="p">,</span> <span class="s" style="color: #d14;">'--version'</span><span class="p">,</span> <span class="n" style="color: #333;">action</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'version'</span><span class="p">,</span> <span class="n" style="color: #333;">version</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">__version__</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="python"> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">add_argument</span><span class="p">(</span><span class="s" style="color: #d14;">'--vbz-version'</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="nb" style="color: #0086b3;">int</span><span class="p">,</span> <span class="n" style="color: #333;">default</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="python"> <span class="n" style="color: #333;">main</span><span class="p">(</span><span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">parse_args</span><span class="p">(),</span> <span class="n" style="color: #333;">parser</span><span class="p">.</span><span class="n" style="color: #333;">print_help</span><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#88d502725b7e50e2e853d328d6c01f442c333715"><strong>python/pyvbz/setup.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,7 +2,7 @@ from setuptools import setup, find_packages</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="n" style="color: #333;">setup</span><span class="p">(</span></span>
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4
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"> <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'pyvbz'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="python"> <span class="n" style="color: #333;">version</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'1.0.<span class="idiff left right">0</span>'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="python"> <span class="n" style="color: #333;">version</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'1.0.<span class="idiff left right">1</span>'</span><span class="p">,</span></span>
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"> <span class="n" style="color: #333;">url</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'https://nanoporetech.com'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="python"> <span class="n" style="color: #333;">author</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Oxford Nanopore Technologies, Limited'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"> <span class="n" style="color: #333;">author_email</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"support@nanoporetech.com"</span><span class="p">,</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,7 +16,7 @@ setup(</td>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"> <span class="s" style="color: #d14;">'Environment :: Console'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"> <span class="s" style="color: #d14;">'Intended Audience :: Developers'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"> <span class="s" style="color: #d14;">'Intended Audience :: Science/Research'</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="python"> <span class="s" style="color: #d14;">'License :: O<span class="idiff left right">ther/Proprietary</span> License'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python"> <span class="s" style="color: #d14;">'License :: O<span class="idiff left">SI Approved :: Mozilla Public</span> License<span class="idiff right"> 2.0</span>'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="python"> <span class="s" style="color: #d14;">'Natural Language :: English'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"> <span class="s" style="color: #d14;">'Operating System :: POSIX :: Linux'</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python"> <span class="s" style="color: #d14;">'Programming Language :: Python :: 2'</span><span class="p">,</span></span>
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<li id="bff01f298b0810a7d152d7bcb141eef12b0d5b5b">
<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#bff01f298b0810a7d152d7bcb141eef12b0d5b5b"><strong>python/test/test_vbz_filter.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,7 +10,7 @@ class TestVbzFilter(unittest.TestCase):</td>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"> <span class="n" style="color: #333;">VBZ_VERISON</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"> <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">test_simple_range</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">):</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="python"> <span class="n" style="color: #333;">original_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">a<span class="idiff left">rray</span></span><span class="p"><span class="idiff">(</span></span><span class="nb" style="color: #0086b3;">range</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="mi" style="color: #099;">100</span><span class="p"><span class="idiff right">)</span>,</span> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"i2"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="python"> <span class="n" style="color: #333;">original_data</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">numpy</span><span class="p">.</span><span class="n" style="color: #333;">arange</span><span class="p">(</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="mi" style="color: #099;">100</span><span class="p">,</span> <span class="n" style="color: #333;">dtype</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">"i2"</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">h5py</span><span class="p">.</span><span class="n" style="color: #333;">File</span><span class="p">(</span><span class="s" style="color: #d14;">"test_file.h5"</span><span class="p">,</span> <span class="s" style="color: #d14;">"w"</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">f</span><span class="p">:</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"> <span class="n" style="color: #333;">f</span><span class="p">.</span><span class="n" style="color: #333;">create_dataset</span><span class="p">(</span><span class="s" style="color: #d14;">"bar"</span><span class="p">,</span> <span class="n" style="color: #333;">compression</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">32020</span><span class="p">,</span> <span class="n" style="color: #333;">compression_opts</span><span class="o" style="font-weight: 600;">=</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">.</span><span class="n" style="color: #333;">VBZ_VERISON</span><span class="p">,</span> <span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="mi" style="color: #099;">1</span><span class="p">),</span> <span class="n" style="color: #333;">data</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">original_data</span><span class="p">)</span></span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#1fbf3843d01cc025d3cb79c548e54b9936ce1adb"><strong>vbz/v0/vbz_streamvbyte_impl_sse3.h</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,11 @@</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <cstring></span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <iostream></span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="cpp"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#if (defined __INTEL_COMPILER) && (defined WIN32)</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <intrin.h></span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#else</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <x86intrin.h></span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#endif</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="cpp"><span class="c1" style="color: #998; font-style: italic;">// See: https://github.com/lemire/streamvbyte</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cpp"><span class="k" style="font-weight: 600;">static</span> <span class="k" style="font-weight: 600;">const</span> <span class="kt" style="color: #458; font-weight: 600;">uint8_t</span> <span class="n" style="color: #333;">encode_shuf_lut</span><span class="p">[</span><span class="mi" style="color: #099;">64</span><span class="o" style="font-weight: 600;">*</span><span class="mi" style="color: #099;">16</span><span class="p">]</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span></span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#f297bdc416c43d004e103af1b250b55a3e5033e7"><strong>vbz_plugin/CMakeLists.txt</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -24,6 +24,19 @@ target_link_libraries(vbz_hdf_plugin</td>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="cmake"> vbz</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="cmake"></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_CXX_COMPILER_ID</span><span class="si" style="color: #d14;">}</span> MATCHES <span class="s2" style="color: #d14;">"Intel"</span> AND NOT WIN32<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">target_link_libraries</span><span class="p">(</span>vbz_hdf_plugin</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="cmake"> PRIVATE</span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="cmake"> $<$<CXX_COMPILER_ID:Intel>:-static-intel></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="cmake"> $<$<CXX_COMPILER_ID:Intel>:-mkl=sequential></span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="cmake"> $<$<CXX_COMPILER_ID:Intel>:-wd10237></span>
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33
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="cmake"> <span class="p">)</span></span>
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34
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="cmake"></span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>ENABLE_CODE_SIGNING<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="cmake"> <span class="nf" style="color: #900; font-weight: 600;">hdf_add_signing_command</span><span class="p">(</span>vbz_hdf_plugin<span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>WIN32<span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">target_compile_definitions</span><span class="p">(</span>vbz_hdf_plugin</span>
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42
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="cmake"> PRIVATE</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -49,9 +62,26 @@ if (NOT VBZ_BUILD_ARCHIVE)</td>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>VBZ_PLUGIN_COMPONENT COMPONENT hdf_plugin<span class="p">)</span></span>
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50
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63
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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51
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64
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="cmake"></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>INSTALL_DESTINATION <span class="s2" style="color: #d14;">"hdf5/lib/plugin"</span><span class="p">)</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">if</span> <span class="p">(</span>STANDARD_LIB_INSTALL<span class="p">)</span></span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>VBZ_PLUGIN_COMPONENT COMPONENT vbz_hdf_plugin<span class="p">)</span></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set_target_properties</span><span class="p">(</span>vbz_hdf_plugin</span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="cmake"> PROPERTIES</span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="cmake"> VERSION <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">PROJECT_VERSION</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="cmake"> SOVERSION <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">PROJECT_VERSION_MAJOR</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="cmake"> <span class="p">)</span></span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">if</span><span class="p">(</span>WIN32<span class="p">)</span></span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>INSTALL_DESTINATION <span class="s2" style="color: #d14;">"bin"</span><span class="p">)</span></span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">else</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>INSTALL_DESTINATION <span class="s2" style="color: #d14;">"lib"</span><span class="p">)</span></span>
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77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">elseif</span> <span class="p">(</span>VBZ_BUILD_ARCHIVE<span class="p">)</span></span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="cmake"> <span class="nb" style="color: #0086b3;">set</span><span class="p">(</span>INSTALL_DESTINATION <span class="s2" style="color: #d14;">"bin"</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">endif</span><span class="p">()</span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">install</span><span class="p">(</span></span>
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53
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="cmake"> TARGETS vbz_hdf_plugin</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="cmake"> DESTINATION <span class="s2" style="color: #d14;"><span class="idiff left right">"hdf5/lib/plugin"</span></span></span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="cmake"> DESTINATION <span class="si" style="color: #d14;"><span class="idiff left">${</span></span><span class="nv" style="color: #008080;"><span class="idiff">INSTALL_DESTINATION</span></span><span class="si" style="color: #d14;"><span class="idiff right">}</span></span></span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">VBZ_PLUGIN_COMPONENT</span><span class="si" style="color: #d14;">}</span></span>
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86
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="cmake"></span>
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<li id="3b04fb7a6879ccd20c25c4db074518a793bade52">
<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#3b04fb7a6879ccd20c25c4db074518a793bade52"><strong>vbz_plugin/hdf_test_utils/CMakeLists.txt</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,10 +7,11 @@ set_property(TARGET hdf_test_utils PROPERTY CXX_STANDARD 11)</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">target_include_directories</span><span class="p">(</span>hdf_test_utils</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="cmake"> PUBLIC</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_CURRENT_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_CURRENT_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_C_INCLUDE_DIRS</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cmake"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">target_link_libraries</span><span class="p">(</span>hdf_test_utils</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="cmake"> PRIVATE</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="cmake"> HDF5::C</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="cmake"> <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">HDF5_C_LIBRARIES</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#08cea695dd5c712bb3a8415a5bc014fcec4042cf"><strong>vbz_plugin/perf/CMakeLists.txt</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,7 +8,7 @@ add_sanitizers(vbz_hdf_perf_test)</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">target_link_libraries</span><span class="p">(</span>vbz_hdf_perf_test</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="cmake"> PRIVATE</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="cmake"> google::benchmark</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="cmake"> HDF5<span class="idiff left right">::C</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="cmake"> <span class="si" style="color: #d14;"><span class="idiff left">${</span></span><span class="nv" style="color: #008080;">HDF5<span class="idiff">_C_LIBRARIES</span></span><span class="si" style="color: #d14;"><span class="idiff right">}</span></span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="cmake"> hdf_test_utils</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cmake"> vbz_hdf_plugin</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="cmake"><span class="p">)</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -19,4 +19,4 @@ add_test(</td>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="cmake"> NAME vbz_hdf_perf_test</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="cmake"> COMMAND vbz_hdf_perf_test</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="cmake"> WORKING_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#75322fb267f7fb9f4d694761113ba0c628250a9c"><strong>vbz_plugin/test/CMakeLists.txt</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,7 @@ set_property(TARGET vbz_hdf_plugin_test PROPERTY CXX_STANDARD 11)</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="cmake"><span class="nb" style="color: #0086b3;">target_link_libraries</span><span class="p">(</span>vbz_hdf_plugin_test</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="cmake"> PUBLIC</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="cmake"> vbz_hdf_plugin</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="cmake"> HDF5<span class="idiff left right">::C</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="cmake"> <span class="si" style="color: #d14;"><span class="idiff left">${</span></span><span class="nv" style="color: #008080;">HDF5<span class="idiff">_C_LIBRARIES</span></span><span class="si" style="color: #d14;"><span class="idiff right">}</span></span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="cmake"> hdf_test_utils</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="cmake"><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="cmake"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,4 +17,4 @@ add_test(</td>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="cmake"> NAME vbz_hdf_plugin_test</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="cmake"> COMMAND vbz_hdf_plugin_test <span class="s2" style="color: #d14;">"</span><span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span><span class="s2" style="color: #d14;">/test_data"</span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="cmake"> WORKING_DIRECTORY <span class="si" style="color: #d14;">${</span><span class="nv" style="color: #008080;">CMAKE_SOURCE_DIR</span><span class="si" style="color: #d14;">}</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="cmake"><span class="p">)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#188d25852979d57b9528863db1a535d734af9cfd"><strong>vbz_plugin/vbz_plugin.cpp</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -108,7 +108,7 @@ size_t vbz_filter(</td>
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<pre style="margin: 0;"> <span id="LC108" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">cd_nelmts</span> <span class="o" style="font-weight: 600;"><</span> <span class="mi" style="color: #099;">3</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="cpp"> <span class="p">}</span></span>
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113
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="cpp"> <span class="kt" style="color: #458; font-weight: 600;">unsigned</span> <span class="kt" style="color: #458; font-weight: 600;">int</span> <span class="n" style="color: #333;">vbz_version</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">cd_values</span><span class="p">[</span><span class="n" style="color: #333;">FILTER_VBZ_VERSION_OPTION</span><span class="p">];</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -139,7 +139,7 @@ size_t vbz_filter(</td>
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139
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139
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">input_span</span><span class="p">.</span><span class="n" style="color: #333;">size</span><span class="p">()</span> <span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">vbz_size_t</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">max</span><span class="p">())</span></span>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="cpp"> <span class="p">{</span></span>
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141
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141
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: Chunk size too large."</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#if VBZ_DEBUG</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -153,7 +153,7 @@ size_t vbz_filter(</td>
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153
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">vbz_is_error</span><span class="p">(</span><span class="n" style="color: #333;">expected_uncompressed_size</span><span class="p">))</span></span>
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154
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="cpp"> <span class="p">{</span></span>
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155
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: size error"</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC156" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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157
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157
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="cpp"> <span class="p">}</span></span>
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158
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158
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="cpp"> <span class="n" style="color: #333;">outbuf</span><span class="p">.</span><span class="n" style="color: #333;">reset</span><span class="p">(</span><span class="n" style="color: #333;">h5_malloc</span><span class="p">(</span><span class="n" style="color: #333;">expected_uncompressed_size</span><span class="p">));</span></span>
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="cpp"></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -166,13 +166,13 @@ size_t vbz_filter(</td>
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166
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166
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<pre style="margin: 0;"> <span id="LC166" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">vbz_is_error</span><span class="p">(</span><span class="n" style="color: #333;">outbuf_used_size</span><span class="p">))</span></span>
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167
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167
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="cpp"> <span class="p">{</span></span>
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168
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168
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: compression error"</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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169
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<pre style="margin: 0;">-<span id="LC169" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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170
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170
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="cpp"> <span class="p">}</span></span>
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171
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171
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="cpp"> </span>
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172
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">outbuf_used_size</span> <span class="o" style="font-weight: 600;">!=</span> <span class="n" style="color: #333;">expected_uncompressed_size</span><span class="p">)</span></span>
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173
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173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="cpp"> <span class="p">{</span></span>
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174
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174
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: decompressed size error"</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC175" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#if VBZ_DEBUG</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -188,14 +188,14 @@ size_t vbz_filter(</td>
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188
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188
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">buf_size</span> <span class="o" style="font-weight: 600;">></span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">numeric_limits</span><span class="o" style="font-weight: 600;"><</span><span class="n" style="color: #333;">vbz_size_t</span><span class="o" style="font-weight: 600;">>::</span><span class="n" style="color: #333;">max</span><span class="p">())</span></span>
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189
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="cpp"> <span class="p">{</span></span>
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190
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: Chunk size too large."</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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191
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="cpp"> <span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="cpp"></span>
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">auto</span> <span class="k" style="font-weight: 600;">const</span> <span class="n" style="color: #333;">byte_remainder</span> <span class="o" style="font-weight: 600;">=</span> <span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">buf_size</span> <span class="o" style="font-weight: 600;">%</span> <span class="n" style="color: #333;">integer_size</span><span class="p">;</span></span>
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">byte_remainder</span> <span class="o" style="font-weight: 600;">!=</span> <span class="mi" style="color: #099;">0</span><span class="p">)</span></span>
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="cpp"> <span class="p">{</span></span>
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197
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: Invalid integer_size specified"</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC198" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="cpp"> <span class="p">}</span></span>
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200
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="cpp"></span>
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201
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201
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="cpp"> <span class="n" style="color: #333;">outbuf_size</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">vbz_max_compressed_size</span><span class="p">(</span><span class="n" style="color: #333;">vbz_size_t</span><span class="p">(</span><span class="o" style="font-weight: 600;">*</span><span class="n" style="color: #333;">buf_size</span><span class="p">),</span> <span class="o" style="font-weight: 600;">&</span><span class="n" style="color: #333;">options</span><span class="p">);</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -214,7 +214,7 @@ size_t vbz_filter(</td>
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214
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214
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">if</span> <span class="p">(</span><span class="n" style="color: #333;">vbz_is_error</span><span class="p">(</span><span class="n" style="color: #333;">outbuf_used_size</span><span class="p">))</span></span>
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215
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="cpp"> <span class="p">{</span></span>
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="cpp"> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">cerr</span> <span class="o" style="font-weight: 600;"><<</span> <span class="s" style="color: #d14;">"vbz_filter: compression error"</span> <span class="o" style="font-weight: 600;"><<</span> <span class="n" style="color: #333;">std</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">endl</span><span class="p">;;</span></span>
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="o" style="font-weight: 600;"><span class="idiff left">-</span></span><span class="mi" style="color: #099;"><span class="idiff right">1</span></span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="cpp"> <span class="k" style="font-weight: 600;">return</span> <span class="mi" style="color: #099;"><span class="idiff left right">0</span></span><span class="p">;</span></span>
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218
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="cpp"> <span class="p">}</span></span>
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219
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#if VBZ_DEBUG</span></span>
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<a href="https://salsa.debian.org/med-team/vbz-compression/-/commit/0ab35a67f05333a77dde9dba973a7672433b3a84#a443fd8fb2d9d0e6ac2a1d56d9d14d2abb8bd7b0"><strong>vbz_plugin/vbz_plugin_user_utils.h</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#pragma once</span></span>
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2
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="c"></span>
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3
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#include <hdf5.h></span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#include "vbz_plugin.h"</span></span>
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4
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="c"></span>
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5
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="c"><span class="cp" style="color: #999; font-weight: 600;">#define FILTER_VBZ_VERSION 1</span></span>
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6
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="c"></span>
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