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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/357e168af234a55fb78902452b0c3fc2f8b77dd5">357e168a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-05-24T13:42:20+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/357e168af234a55fb78902452b0c3fc2f8b77dd5#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 24 May 2021 <span class="idiff left">0</span>1:42:0<span class="idiff right">5</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 24 May 2021 1<span class="idiff left">3</span>:42:0<span class="idiff right">3</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 183 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 96 | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm | 55 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 50 | {imaging,laboratory,practice,his,covid-19,oncology} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> nipype | 30 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 181 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 95 | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm | 53 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 49 | {oncology,his,imaging,covid-19,practice,laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> amide | 29 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools | 28 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> htsjdk | 28 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicomscope | 26 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dcm2niix | 23 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gdcm | 21 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dicomscope | 28 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> nipype | 28 | {imaging,imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> htsjdk | 27 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dcm2niix | 22 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> gdcm | 21 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> gdcm | 20 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> openslide | 18 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> odin | 17 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> gnumed-server | 15 | {covid-19,practice} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> <span class="idiff left">ngs-sdk </span> | 15 | {<span class="idiff right">bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> <span class="idiff left">minc-tools</span> | 15 | {<span class="idiff right">imaging</span>} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> invesalius | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> <span class="idiff left">minc-tools</span> | 14 | {<span class="idiff right">imaging</span>} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">orthanc-webviewer</span> | 14 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> <span class="idiff left">ngs-sdk </span> | 14 | {<span class="idiff right">bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">nifticlib </span> | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> pixelmed | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> <span class="idiff left right">nifticlib </span> | 13 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> <span class="idiff left right">orthanc-webviewer</span> | 13 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> dicomnifti | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> ngs-sdk | 11 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> plastimatch | 11 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> vtk-dicom | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> insighttoolkit4 | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> ngs-sdk | 10 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> king | 9 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> mia | 9 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> vtk-dicom | 9 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> insighttoolkit4 | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> ngs-sdk | 8 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> openslide | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> adun.app | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> bamkit | 7 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> bamkit | 7 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> dicompyler | 7 | {oncology} | </span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> ngs-sdk | 7 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> nifti2dicom | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> nifti2dicom | 6 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> orthanc-dicomweb | 6 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> bart-view | 5 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> busco | 5 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> libminc | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> melting | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> orthanc-mysql | 5 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> orthanc-postgresql | 5 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> melting | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> orthanc-dicomweb | 5 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> salmid | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"> jebl2 | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> librg-utils-perl | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="plaintext"> oscar | 4 | {data,practice,tools} | </span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> salmon | 4 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> treeview | 4 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> orthanc-mysql | 4 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> orthanc-postgresql | 4 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> oscar | 4 | {tools,practice,data} | </span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> pymia | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> salmon | 4 | {covid-19,bio} | </span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> treeview | 4 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> elastix | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> getdata | 3 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"> jebl2 | 3 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> jellyfish1 | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> lagan | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> nifticlib | 3 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> pymia | 3 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> runcircos-gui | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> stacks | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> staden | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> tracetuner | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> biojava-live | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> biomaj3-cli | 2 | {cloud} | </span>
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<pre style="margin: 0;">-<span id="LC65" class="line" lang="plaintext"> blasr | 2 | {bio-ngs,bio} | </span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> blimps | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> brig | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> cat-bat | 2 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> cufflinks | 2 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> cufflinks | 2 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> ea-utils | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> embassy-domainatrix | 2 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC72" class="line" lang="plaintext"> embassy-domalign | 2 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> embassy-domalign | 2 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> ghmm | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> lamarc | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> libsbml | 2 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -80,18 +79,19 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> sift | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> sight | 2 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> anfo | 1 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> arden | 1 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> arden | 1 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> assemblytics | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC86" class="line" lang="plaintext"> beast-mcmc | 1 | {bio<span class="idiff left right">,bio</span>-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="plaintext"> beast-mcmc | 1 | {bio-phylogeny<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> bio-tradis | 1 | {bio-dev,bio} | </span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="plaintext"> bitseq | 1 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="plaintext"> blasr | 1 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> bustools | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> canu | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> clonalframeml | 1 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> clonalframeml | 1 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> clonalorigin | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> ctn | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC94" class="line" lang="plaintext"> embassy-domsearch | 1 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext"> embassy-domsearch | 1 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> estscan | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> fastml | 1 | {bio} | </span>
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97
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> intake | 1 | {bio-dev,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -111,7 +111,7 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> phyutility | 1 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> pique | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> placnet | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC114" class="line" lang="plaintext"> prime-phylo | 1 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext"> prime-phylo | 1 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> python-bcbio-gff | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> qcumber | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> quorum | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -121,17 +121,18 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> segemehl | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> sibsim4 | 1 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> simpleitk | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC124" class="line" lang="plaintext"> spaln | 1 | {covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC125" class="line" lang="plaintext"> spread-phy | 1 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> vienna-rna | 1 | {covid-19,bio} | </span>
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="plaintext"> simrisc | 1 | {oncology} | </span>
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext"> spaln | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext"> spread-phy | 1 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> vienna-rna | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> acedb | 0 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> bambamc | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC129" class="line" lang="plaintext"> bbmap | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext"> bbmap | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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131
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> biojava4-live | 0 | {bio-dev} | </span>
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132
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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133
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> bmtk | 0 | {psychology} | </span>
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134
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC134" class="line" lang="plaintext"> delly | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext"> delly | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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136
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> dextractor | 0 | {covid-19,bio} | </span>
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137
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="plaintext"> ecopcr | 0 | {bio} | </span>
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138
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> eegdev | 0 | {imaging-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -139,12 +140,12 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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139
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140
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> emmax | 0 | {bio} | </span>
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140
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141
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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142
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> fsm-lite | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> gatb-core | 0 | {bio} | </span>
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143
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext"> gatb-core | 0 | {bio} | </span>
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145
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> gifticlib | 0 | {imaging-dev} | </span>
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146
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> hinge | 0 | {bio} | </span>
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147
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> htscodecs | 0 | {covid-19,bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC147" class="line" lang="plaintext"> jmodeltest | 0 | {bio-phylogeny<span class="idiff left right">,bio</span>} | </span>
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148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext"> jmodeltest | 0 | {bio<span class="idiff left right">,bio</span>-phylogeny} | </span>
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149
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> kmerresistance | 0 | {bio} | </span>
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149
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<pre style="margin: 0;"> <span id="LC150" class="line" lang="plaintext"> libbigwig | 0 | {bio-dev} | </span>
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151
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="plaintext"> libbiod | 0 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -187,21 +188,21 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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187
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188
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> opencfu | 0 | {laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> opensurgsim | 0 | {imaging-dev} | </span>
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> orthanc-imagej | 0 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC190" class="line" lang="plaintext"> paraclu | 0 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="plaintext"> paraclu | 0 | {cloud<span class="idiff left right">,bio</span>} | </span>
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> parallel-fastq-dump | 0 | {covid-19} | </span>
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193
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> pbcopper | 0 | {bio-dev} | </span>
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194
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> pbseqlib | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC194" class="line" lang="plaintext"> perm | 0 | {cloud<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext"> perm | 0 | {<span class="idiff left right">bio,</span>cloud} | </span>
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> pigx-rnaseq | 0 | {bio,covid-19} | </span>
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> piler | 0 | {bio} | </span>
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198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> pilercr | 0 | {bio} | </span>
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199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> plasmidseeker | 0 | {bio} | </span>
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199
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<pre style="margin: 0;">-<span id="LC199" class="line" lang="plaintext"> pplacer | 0 | {bio<span class="idiff left right">-phylogeny</span>,covid-19,bio} | </span>
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200
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<pre style="margin: 0;">+<span id="LC200" class="line" lang="plaintext"> pplacer | 0 | {bio,covid-19,bio<span class="idiff left right">-phylogeny</span>} | </span>
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201
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="plaintext"> proalign | 0 | {bio-phylogeny,bio} | </span>
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202
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="plaintext"> pscan-chip | 0 | {bio} | </span>
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203
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> python-epimodels | 0 | {epi} | </span>
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<pre style="margin: 0;">-<span id="LC203" class="line" lang="plaintext"> python-seqcluster | 0 | {covid-19,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="plaintext"> python-seqcluster | 0 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC205" class="line" lang="plaintext"> python-seqcluster | 0 | {covid-19,bio-dev} | </span>
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205
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="plaintext"> python-wdlparse | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="plaintext"> q2-sample-classifier | 0 | {bio,bio-dev} | </span>
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208
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> rdp-alignment | 0 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -209,16 +210,15 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> resfinder-db | 0 | {bio} | </span>
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211
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="plaintext"> rtax | 0 | {cloud,bio} | </span>
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212
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="plaintext"> sambamba | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext"> samblaster | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC213" class="line" lang="plaintext"> samblaster | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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214
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="plaintext"> sbmltoolbox | 0 | {bio-dev} | </span>
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215
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="plaintext"> seq-gen | 0 | {bio} | </span>
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216
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="plaintext"> sga | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> shovill | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="plaintext"> shovill | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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218
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="plaintext"> simpleitk | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> simrisc | 0 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="plaintext"> skesa | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> skewer | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> smrtanalysis | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext"> smrtanalysis | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> soapaligner | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> soapsnp | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="plaintext"> spaced | 0 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -227,17 +227,17 @@ Last-Update: Mon, 24 May 2021 01:42:05 +0000</td>
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227
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> suitename | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC228" class="line" lang="plaintext"> surankco | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC229" class="line" lang="plaintext"> svim | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC230" class="line" lang="plaintext"> thesias | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC230" class="line" lang="plaintext"> thesias | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC231" class="line" lang="plaintext"> tophat-recondition | 0 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC232" class="line" lang="plaintext"> trace2dbest | 0 | {bio} | </span>
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233
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> tvc | 0 | {bio} | </span>
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234
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC235" class="line" lang="plaintext"> varscan | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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235
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<pre style="margin: 0;">+<span id="LC235" class="line" lang="plaintext"> varscan | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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236
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236
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<pre style="margin: 0;"> <span id="LC236" class="line" lang="plaintext"> vtk-dicom | 0 | {imaging-dev} | </span>
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237
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237
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> xdffileio | 0 | {imaging-dev} | </span>
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<td class="old_line diff-line-num" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> yaha | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC239" class="line" lang="plaintext"> yanagiba | 0 | {<span class="idiff left right">bio,</span>covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext"> zalign | 0 | {<span class="idiff left right">bio,</span>cloud} | </span>
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<pre style="margin: 0;">+<span id="LC239" class="line" lang="plaintext"> yanagiba | 0 | {covid-19<span class="idiff left right">,bio</span>} | </span>
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240
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<pre style="margin: 0;">+<span id="LC240" class="line" lang="plaintext"> zalign | 0 | {cloud<span class="idiff left right">,bio</span>} | </span>
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241
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241
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<pre style="margin: 0;"> <span id="LC241" class="line" lang="plaintext"> mssstest | -1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC242" class="line" lang="plaintext"> sight | -1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="plaintext">(270 rows)</span>
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