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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/hdmf">Debian Med / hdmf</a>
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<h4>
Commits:
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<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/hdmf/-/commit/e1255002347770dd5c85ac40f1f98b01ee752998">e1255002</a></strong>
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<span>by Nilesh Patra</span>
<i>at 2021-05-28T03:08:38+05:30</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.6</pre>
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<strong><a href="https://salsa.debian.org/med-team/hdmf/-/commit/bac436cb79f8566ca39808506f13316dd40c9e1a">bac436cb</a></strong>
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<span>by Nilesh Patra</span>
<i>at 2021-05-28T03:08:44+05:30</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.5.6'
Update to upstream version '2.5.6'
with Debian dir 5d587b2e33f439a59ef5fa172822461954c44e41</pre>
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<strong><a href="https://salsa.debian.org/med-team/hdmf/-/commit/e7bdeafc265ad5df404c764d43e82a3c28cd1367">e7bdeafc</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-05-28T03:10:43+05:30</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Interim changelog entry
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<h4>7 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#7d26833a43d8865f6d9679068f6f9ee7d6e13dcf">
PKG-INFO
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#995e3e3caa8adb6245cc5c1c081a02a4309f1f45">
requirements-min.txt
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<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<li class="file-stats">
<a href="#9b0869c9ecbb8a6f13e0602b6bff34190dec2598">
src/hdmf.egg-info/PKG-INFO
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<li class="file-stats">
<a href="#a008b549aa28a9757d97c9e0feabbb3722363e49">
src/hdmf.egg-info/requires.txt
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<li class="file-stats">
<a href="#ba66a4d062f6b50b4f5b0c916099b2f2e9ba2d43">
src/hdmf/_version.py
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<h4>Changes:</h4>
<li id="7d26833a43d8865f6d9679068f6f9ee7d6e13dcf">
<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#7d26833a43d8865f6d9679068f6f9ee7d6e13dcf"><strong>PKG-INFO</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Metadata-Version: 2.1</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Name: hdmf</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">Version: 2.5.<span class="idiff left right">5</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">Version: 2.5.<span class="idiff left right">6</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Summary: A package for standardizing hierarchical object data</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Home-page: https://github.com/hdmf-dev/hdmf</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Author: Andrew Tritt</span>
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<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">hdmf (2.5.<span class="idiff left right">5</span>-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">hdmf (2.5.<span class="idiff left right">6</span>-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Team Upload.</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> * New upstream version 2.5.<span class="idiff left right">5</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * New upstream version 2.5.<span class="idiff left right">6</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * Fix copyright</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> * d/rules: set LC_ALL to C.UTF-8 to make build reproducible</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#995e3e3caa8adb6245cc5c1c081a02a4309f1f45"><strong>requirements-min.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"># package dependencies and their minimum versions for installing HDMF</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"># the requirements here specify '==' for testing; setup.py replaces '==' with '>='</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">h5py==2.9,<3 # support for setting attrs to lists of utf-8 added in 2.9</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">numpy==1.16,<1.21</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">scipy==1.1,<2</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">pandas==0.23,<2</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">ruamel.yaml==0.15,<1</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">jsonschema==2.6.0,<4</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext"># minimum versions of package dependencies for installing HDMF</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">h5py==2.9 # support for setting attrs to lists of utf-8 added in 2.9</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">numpy==1.16</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">scipy==1.1</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">pandas==1.0.5</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">ruamel.yaml==0.15</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">jsonschema==2.6.0</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">setuptools</span></pre>
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<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#8e2edce0d507e1297474f25c00cae94258db38d8"><strong>setup.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># -*- coding: utf-8 -*-</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">setuptools</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">setup</span><span class="p">,</span> <span class="n" style="color: #333;">find_packages</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">versioneer</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,10 +11,15 @@ print('found these packages:', pkgs)</td>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="n" style="color: #333;">schema_dir</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'common/hdmf-common-schema/common'</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="python"><span class="k" style="font-weight: 600;">with</span> <span class="nb" style="color: #0086b3;">open</span><span class="p">(</span><span class="s" style="color: #d14;">'requirements-min.txt'</span><span class="p">,</span> <span class="s" style="color: #d14;">'r'</span><span class="p">)</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">fp</span><span class="p">:</span></span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># replace == with >= and remove trailing comments and spaces</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="python"> <span class="n" style="color: #333;">reqs</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">x</span><span class="p">.</span><span class="n" style="color: #333;">replace</span><span class="p">(</span><span class="s" style="color: #d14;">'=='</span><span class="p">,</span> <span class="s" style="color: #d14;">'>='</span><span class="p">).</span><span class="n" style="color: #333;">split</span><span class="p">(</span><span class="s" style="color: #d14;">'#'</span><span class="p">)[</span><span class="mi" style="color: #099;">0</span><span class="p">].</span><span class="n" style="color: #333;">strip</span><span class="p">()</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">x</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">fp</span><span class="p">]</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="python"> <span class="n" style="color: #333;">reqs</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span><span class="n" style="color: #333;">x</span> <span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">x</span> <span class="ow" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">reqs</span> <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">x</span><span class="p">]</span> <span class="c1" style="color: #998; font-style: italic;"># remove empty strings</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"><span class="n" style="color: #333;">reqs</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">[</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"> <span class="s" style="color: #d14;">'h5py>=2.9,<3'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="python"> <span class="s" style="color: #d14;">'numpy>=1.16,<1.21'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="python"> <span class="s" style="color: #d14;">'scipy>=1.1,<2'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="python"> <span class="s" style="color: #d14;">'pandas>=1.0.5,<2'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="python"> <span class="s" style="color: #d14;">'ruamel.yaml>=0.15,<1'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="python"> <span class="s" style="color: #d14;">'jsonschema>=2.6.0,<4'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="python"> <span class="s" style="color: #d14;">'setuptools'</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="python"><span class="p">]</span></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"><span class="k" style="font-weight: 600;">print</span><span class="p">(</span><span class="n" style="color: #333;">reqs</span><span class="p">)</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"></span>
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<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#9b0869c9ecbb8a6f13e0602b6bff34190dec2598"><strong>src/hdmf.egg-info/PKG-INFO</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Metadata-Version: 2.1</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Name: hdmf</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">Version: 2.5.<span class="idiff left right">5</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">Version: 2.5.<span class="idiff left right">6</span></span>
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Summary: A package for standardizing hierarchical object data</span>
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5
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Home-page: https://github.com/hdmf-dev/hdmf</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Author: Andrew Tritt</span>
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<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#a008b549aa28a9757d97c9e0feabbb3722363e49"><strong>src/hdmf.egg-info/requires.txt</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">h5py<3,>=2.9</span>
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2
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">numpy<1.21,>=1.16</span>
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3
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">scipy<2,>=1.1</span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">pandas<2,>=<span class="idiff left right">0.23</span></span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">pandas<2,>=<span class="idiff left right">1.0.5</span></span>
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5
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">ruamel.yaml<1,>=0.15</span>
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6
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">jsonschema<4,>=2.6.0</span>
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7
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">setuptools</span></pre>
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<li id="ba66a4d062f6b50b4f5b0c916099b2f2e9ba2d43">
<a href="https://salsa.debian.org/med-team/hdmf/-/compare/4ff7c551e5b56bdca3b5900bc3ff6c38a28969e9...e7bdeafc265ad5df404c764d43e82a3c28cd1367#ba66a4d062f6b50b4f5b0c916099b2f2e9ba2d43"><strong>src/hdmf/_version.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,11 +8,11 @@ import json</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"><span class="n" style="color: #333;">version_json</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'''</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="s" style="color: #d14;">{</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="python"><span class="s" style="color: #d14;"> "date": "2021-05-<span class="idiff left right">17T17:02:1</span>1-0700",</span></span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="python"><span class="s" style="color: #d14;"> "date": "2021-05-<span class="idiff left right">24T10:39:2</span>1-0700",</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="s" style="color: #d14;"> "dirty": false,</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"><span class="s" style="color: #d14;"> "error": null,</span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="python"><span class="s" style="color: #d14;"> "full-revisionid": "<span class="idiff left right">db511489a3f82968446b165ec3bd60b34722587c</span>",</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="python"><span class="s" style="color: #d14;"> "version": "2.5.<span class="idiff left right">5</span>"</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"><span class="s" style="color: #d14;"> "full-revisionid": "<span class="idiff left right">f983e800097450c912c72341695394b9aa61f816</span>",</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"><span class="s" style="color: #d14;"> "version": "2.5.<span class="idiff left right">6</span>"</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="s" style="color: #d14;">}</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"><span class="s" style="color: #d14;">'''</span> <span class="c1" style="color: #998; font-style: italic;"># END VERSION_JSON</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"></span>
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