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<h3>
Nilesh Patra pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/kma">Debian Med / kma</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/kma/-/commit/8e60625bd25becb8adeff2fabd38a561574e452e">8e60625b</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-05-31T02:28:26+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.3.19</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#ddd34e1789cc70e19fb0e89d73fae8d104ed9c40">
align.c
</a>
</li>
<li class="file-stats">
<a href="#302e1fff50e6c455134afebd2f2fa2f0c5b717d8">
alnfrags.c
</a>
</li>
<li class="file-stats">
<a href="#55d4bbc428d78b9759b6af17f5e1e0dca21667fb">
ankers.c
</a>
</li>
<li class="file-stats">
<a href="#99bf70d606be11e0793b7e3ba6c29182326341d6">
assembly.c
</a>
</li>
<li class="file-stats">
<a href="#51c40fb7131cdb8caf085506f3b96d589be532ff">
assembly.h
</a>
</li>
<li class="file-stats">
<a href="#56cfe3f38f05d51ac39678e58b5884d109593d0b">
compdna.c
</a>
</li>
<li class="file-stats">
<a href="#7a399ec3069b026410c5114e248eb7e7eebad73a">
compkmers.h
</a>
</li>
<li class="file-stats">
<a href="#150c159b696c4d2657c933fc25c1f6af0b301fe2">
compress.c
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</li>
<li class="file-stats">
<a href="#1fa9be53365c168355414c67a78869ee9befb877">
dist.c
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</li>
<li class="file-stats">
<a href="#66fff59064c69106947290d36caf080b8b637bfa">
ef.c
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<li class="file-stats">
<a href="#6f01b21e666698a62c6dd6fcadb36a64d4bc30d4">
frags.c
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<li class="file-stats">
<a href="#0b5ffc8f7b4dae4c15ab46909e3b4189a01fb548">
hashmapcci.c
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<li class="file-stats">
<a href="#fe684ebf71f22762560b62973b5be5098b7ce2a4">
hashmapcci.h
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<li class="file-stats">
<a href="#7eed163ea0757dada23cd667898abf840233da45">
index.c
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</li>
<li class="file-stats">
<a href="#5bb411548ec4b39482e6de83d3ad98f29b1162b1">
kma.c
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</li>
<li class="file-stats">
<a href="#1068ff9521a9aa2d828fe0a9226050ee939cfb03">
kmapipe.c
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<li class="file-stats">
<a href="#1588a57551bcafe3d1793dc54da7325d98596512">
kmmap.c
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<li class="file-stats">
<a href="#57966272a58cfa0f29a50e15609a883267e2471e">
loadupdate.c
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<li class="file-stats">
<a href="#088a2f1aaa170cd721dbae6f4b2bcb8239c7119a">
mt1.c
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</li>
<li class="file-stats">
<a href="#0dba1f98767e5db22fa3416ee42bd325cc74ad2e">
pherror.h
</a>
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<li class="file-stats">
<a href="#ca9efd475143efe0a1b0464c67f49900d98ca75a">
runkma.c
</a>
</li>
<li class="file-stats">
<a href="#3ff76aca17d9815adbbfee02596e6c4d46aa1384">
sam.c
</a>
</li>
<li class="file-stats">
<a href="#f9ead8e7fb7b1680f786604627e0ac2147f4b7ef">
savekmers.c
</a>
</li>
<li class="file-stats">
<a href="#7fa02bd1b412f83275abb82df0572b57f1958a70">
seq2fasta.c
</a>
</li>
<li class="file-stats">
<a href="#4db3145e326538364cfe2eb040aba68679a68893">
shm.c
</a>
</li>
<li class="file-stats">
<a href="#cd8b7c197c9ac04f72eb54b22a8a01d5b1d0391f">
sparse.c
</a>
</li>
<li class="file-stats">
<a href="#f80652dda49a7117428c0f92935664fc8cd4e2d1">
spltdb.c
</a>
</li>
<li class="file-stats">
<a href="#c3441a20f6e779324e338f1bdbacc74391f91c85">
threader.h
</a>
</li>
<li class="file-stats">
<a href="#1c6375d34d9e418d1139bd146337fb256ac24a2a">
tmp.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
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