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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/78568f40afa6cb3e7600da7f32c2c088c06fda52">78568f40</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-06-07T13:42:20+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/78568f40afa6cb3e7600da7f32c2c088c06fda52#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 07 Jun 2021 <span class="idiff left right">0</span>1:42:04 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 07 Jun 2021 1<span class="idiff left right">3</span>:42:04 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">2</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">0</span> | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | <span class="idiff left right">50</span> | {oncology,his,imaging,covid-19,practice,laboratory} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">2</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">0</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | <span class="idiff left right">8</span>9 | {practice,imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> orthanc-wsi | <span class="idiff left right">49</span> | {oncology,his,imaging,covid-19,practice,laboratory} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">0</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> amide | 30 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicom3tools | 29 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> htsjdk | 27 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> openslide | 26 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">1</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">0</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> minc-tools | 17 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> gdcm | 15 | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> odin | 15 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> adun.app | 14 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> gdcm | 14 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> gdcm | 14 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> odin | 14 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> gnumed-server | 13 | {covid-19,practice} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> dicomnifti | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> pixelmed | 12 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> dicomnifti | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> nifticlib | 11 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> pixelmed | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> insighttoolkit4 | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> orthanc-webviewer | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> plastimatch | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> king | 9 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> melting | 9 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> mia | 8 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> plastimatch | 9 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> ngs-sdk | 8 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> ea-utils | 7 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> king | 7 | {imaging,typesetting} | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> mia | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> nifti2dicom | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> runcircos-gui | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> <span class="idiff left">ea-utils</span> | <span class="idiff">6</span> | {<span class="idiff right">bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> <span class="idiff left">salmon </span> | <span class="idiff">7</span> | {<span class="idiff right">covid-19,bio}</span> | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> jebl2 | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> nifti2dicom | 6 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> openslide | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> salmon | 6 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> stacks | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> staden | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> treeview | 6 | {bio-phylogeny,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -55,7 +56,6 @@ Last-Update: Mon, 07 Jun 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> anfo | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> arden | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> assemblytics | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> bart-view | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> beast-mcmc | 4 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> bitseq | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> blasr | 4 | {bio,bio-ngs} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -86,6 +86,7 @@ Last-Update: Mon, 07 Jun 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> sibsim4 | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="plaintext"> spread-phy | 4 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> bamkit | 3 | {bio,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext"> bart-view | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> biomaj3-cli | 3 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> clonalorigin | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> ecopcr | 3 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -237,5 +238,5 @@ Last-Update: Mon, 07 Jun 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> mssstest | -1 | {tools} | </span>
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239
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> python-seqcluster | -1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC240" class="line" lang="plaintext"> sight | -1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC240" class="line" lang="plaintext">(26<span class="idiff left right">8</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC241" class="line" lang="plaintext">(26<span class="idiff left right">9</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC242" class="line" lang="plaintext"></span></pre>
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