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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/82a875c483a43cb7b99ef706c19c9e7f9fe9b5b5">82a875c4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-07-24T13:42:21+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/82a875c483a43cb7b99ef706c19c9e7f9fe9b5b5#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 24 Jul 2021 <span class="idiff left right">0</span>1:42:04 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 24 Jul 2021 1<span class="idiff left right">3</span>:42:04 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">0</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">3</span> | {imaging,covid-19,practice} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">1</span> | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">5</span> | {imaging,covid-19,practice} | </span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 52 | {imaging,practice,his,covid-19,oncology,laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> dicomscope | 32 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">0</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> gdcm | 3<span class="idiff left right">2</span> | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> amide | 29 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dicom3tools | 26 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> gdcm | 25 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dcm2niix | 24 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> htsjdk | 24 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dcm2niix | 23 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> odin | 18 | {imaging-dev,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> orthanc-webviewer | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> gdcm | 13 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> gnumed-server | 13 | {covid-19,practice} | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> minc-tools | 13 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> pixelmed | 13 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> gdcm | 12 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> insighttoolkit4 | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> invesalius | 11 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> insighttoolkit4 | 12 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> invesalius | 12 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> ngs-sdk | 11 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> dicomnifti | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> nifticlib | 10 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> adun.app | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> openslide | 8 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> plastimatch | 8 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> adun.app | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> libminc | 7 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> mia | 7 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> nifti2dicom | 7 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,12 +37,12 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> orthanc-postgresql | 6 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> oscar | 6 | {tools,data,practice} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> dicompyler | 5 | {oncology} | </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> librg-utils-perl | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> nifti2dicom | 5 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> salmid | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> bart-view | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> ea-utils | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> jebl2 | 4 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> librg-utils-perl | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> ngs-sdk | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> openslide | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> orthanc-mysql | 4 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -50,6 +50,7 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> biojava-live | 3 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> blasr | 3 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> busco | 3 | {bio,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> elastix | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> libsbml | 3 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> melting | 3 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> pymia | 3 | {imaging-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -58,7 +59,6 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> treeview | 3 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> beast-mcmc | 2 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> blimps | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> elastix | 2 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> embassy-domainatrix | 2 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> embassy-domalign | 2 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> embassy-domsearch | 2 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -70,7 +70,6 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> papyrus | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> pbdagcon | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> phyutility | 2 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC73" class="line" lang="plaintext"> piler | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> sift | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> staden | 2 | {bio} | </span>
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75
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> tracetuner | 2 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="80" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -80,7 +79,6 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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79
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> brig | 1 | {bio} | </span>
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81
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80
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> canu | 1 | {bio} | </span>
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81
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> cat-bat | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> cufflinks | 1 | {cloud,bio} | </span>
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84
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82
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> ecopcr | 1 | {bio} | </span>
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85
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83
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> fsm-lite | 1 | {bio} | </span>
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<td class="old_line diff-line-num" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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84
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> gatb-core | 1 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="101" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="99" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -101,6 +99,7 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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101
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99
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> orthanc-python | 1 | {covid-19} | </span>
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102
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100
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> paraclu | 1 | {cloud,bio} | </span>
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103
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101
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> perm | 1 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext"> piler | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> prime-phylo | 1 | {cloud,bio} | </span>
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<td class="old_line diff-line-num" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> proalign | 1 | {bio,bio-phylogeny} | </span>
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105
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> rdp-classifier | 1 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -131,6 +130,7 @@ Last-Update: Sat, 24 Jul 2021 01:42:04 +0000</td>
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131
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130
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> clonalframeml | 0 | {covid-19,bio} | </span>
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132
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131
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> clonalorigin | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> ctn | 0 | {imaging-dev} | </span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext"> cufflinks | 0 | {cloud,bio} | </span>
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134
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134
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> delly | 0 | {bio,covid-19} | </span>
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135
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135
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> dextractor | 0 | {bio,covid-19} | </span>
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136
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136
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> eegdev | 0 | {imaging-dev} | </span>
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