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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/767f245e6f6e90311000ebfa5287237d811698f6">767f245e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-08-08T13:42:19+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/767f245e6f6e90311000ebfa5287237d811698f6#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sun, 08 Aug 2021 <span class="idiff left right">0</span>1:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sun, 08 Aug 2021 1<span class="idiff left right">3</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   |     Tasks                                           |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> dcmtk                         |    171 | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |    10<span class="idiff left right">1</span> | {imaging,covid-19,practice}                         | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |    10<span class="idiff left right">2</span> | {imaging,covid-19,practice}                         | </span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> orthanc-wsi                   |     50 | {imaging,practice,his,covid-19,oncology,laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> gdcm                          |     32 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> dicom3tools                   |     27 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> amide                         |     26 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> dicom3tools                   |     26 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> dcm2niix                      |     25 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dicomscope                    |     25 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> htsjdk                        |     24 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> gdcm                          |     22 | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> htsjdk                        |     25 | {bio-dev}                                           | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> gdcm                          |     23 | {covid-19,imaging}                                  | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dcm2niix                      |     21 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> odin                          |     21 | {imaging-dev,imaging}                               | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> orthanc-webviewer             |     18 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> insighttoolkit4               |     15 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> gdcm                          |     12 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> invesalius                    |     12 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> dicomnifti                    |     11 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> pixelmed                      |     11 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> adun.app                      |     10 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> mia                           |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> pixelmed                      |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> openslide                     |      9 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> openslide                     |     10 | {imaging}                                           | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> libminc                       |      8 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> ngs-sdk                       |      8 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> nifti2dicom                   |      8 | {imaging}                                           | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,7 +37,6 @@ Last-Update: Sun, 08 Aug 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> ea-utils                      |      6 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> jebl2                         |      6 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> king                          |      6 | {imaging,typesetting}                               | </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> ngs-sdk                       |      6 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> oscar                         |      6 | {tools,data,practice}                               | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> dicompyler                    |      5 | {oncology}                                          | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> elastix                       |      5 | {imaging}                                           | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -48,6 +47,7 @@ Last-Update: Sun, 08 Aug 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> beast-mcmc                    |      4 | {bio-phylogeny,bio}                                 | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> biojava-live                  |      4 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> embassy-domainatrix           |      4 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> libsbml                       |      4 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> phyutility                    |      4 | {bio,cloud}                                         | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> pymia                         |      4 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> saint                         |      4 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> ipig                          |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> jellyfish1                    |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> lagan                         |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext"> libdivsufsort                 |      3 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> libpal-java                   |      3 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> librg-utils-perl              |      3 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="plaintext"> libsbml                       |      3 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> mauve-aligner                 |      3 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> ngs-sdk                       |      3 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> obitools                      |      3 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> gatb-core                     |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> jmodeltest                    |      2 | {bio-phylogeny,bio}                                 | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> lamarc                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="plaintext"> libdivsufsort                 |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> libmuscle                     |      2 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> libncl                        |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> librdp-taxonomy-tree-java     |      2 | {bio-dev}                                           | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> nipype                        |      2 | {imaging-dev,imaging}                               | </span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> openslide                     |      2 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> orthanc-gdcm                  |      2 | {imaging}                                           | </span>
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> papyrus                       |      2 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> pbdagcon                      |      2 | {bio}                                               | </span>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> prime-phylo                   |      2 | {cloud,bio}                                         | </span>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> rdp-classifier                |      2 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> ncbi-vdb                      |      1 | {bio-dev}                                           | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> opencfu                       |      1 | {laboratory}                                        | </span>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> orthanc-python                |      1 | {covid-19}                                          | </span>
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<pre style="margin: 0;">-<span id="LC141" class="line" lang="plaintext"> papyrus                       |      1 | {imaging-dev}                                       | </span>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> pbseqlib                      |      1 | {bio-dev}                                           | </span>
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143
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> phast                         |      1 | {bio}                                               | </span>
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<td class="old_line diff-line-num" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
144
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> placnet                       |      1 | {bio}                                               | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -234,5 +233,5 @@ Last-Update: Sun, 08 Aug 2021 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> yanagiba                      |      0 | {bio,covid-19}                                      | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> mssstest                      |     -1 | {tools}                                             | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> python-seqcluster             |     -1 | {bio}                                               | </span>
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext">(26<span class="idiff left right">5</span> rows)</span>
</pre>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext">(26<span class="idiff left right">4</span> rows)</span>
</pre>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/767f245e6f6e90311000ebfa5287237d811698f6#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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