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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/q2-demux">Debian Med / q2-demux</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/f7111177f4f5ed9110ea9a153237a659459c57bb">f7111177</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T22:54:13+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Harry Potter and the Chamber of Secrets
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/b61f61c74a1311ad796b7bb1c125d3a476e23a37">b61f61c7</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T23:00:44+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Repack to remove license files for non-existent modules in the source-tree
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/fa32ebf1799d3078c1f743d24357d7b2e6171913">fa32ebf1</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T23:13:17+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2020.11.1+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/bd7020712e42674b7863201b2433c4383a7a1be3">bd702071</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T23:13:17+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/salsa-ci.yml: No i386 build
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/3dd5ae6843b148738fda5b130c3fa812c9f81979">3dd5ae68</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T23:13:17+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/tests/run-unit-test: We are prepped for the test, lets not cheat
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-demux/-/commit/204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7">204a7600</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-08-24T23:13:48+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>11 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#f9edd2463b2d6ae17d2807a165333128cbd2bc9d">
<span class="new-file">
+
debian/patches/0001-make-compatible-with-webpack4.patch
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</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<span class="new-file">
+
debian/patches/series
</span>
</a>
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
debian/salsa-ci.yml
</a>
</li>
<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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</li>
<li class="file-stats">
<a href="#e1d4ef669650e83202986861e6740a428b7b1aee">
<span class="deleted-file">
−
q2_demux/_summarize/assets/licenses/d3-license.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#d6bb17df1f3a430ff0853f91968d4b4bdb5b402a">
q2_demux/_version.py
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">q2-demux (2020.11.1<span class="idiff left right">-2) UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">q2-demux (2020.11.1<span class="idiff left right">+dfsg-1) unstable</span>; urgency=medium</span>
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<td class="new_line diff-line-num" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<td class="old_line diff-line-num new" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team Upload.</span>
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<td class="new_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> [ Steffen Moeller ]</span>
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<td class="old_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * Fixed d/watch.</span>
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<td class="new_line diff-line-num old" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> * First cheap "reuse-Makefile"-shot to create webpack dist</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> @Nilesh</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> * Please help to make this as efficient as for q2-diversity.</span>
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<td class="old_line diff-line-num old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> Webpack crashed under my hands.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> [ Nilesh Patra ]</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Get JS source building</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Repack to remove license files for non-existent</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> modules in the source-tree</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * New upstream version 2020.11.1+dfsg</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> * d/salsa-ci.yml: No i386 build</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * d/tests/run-unit-test: the dis directory exists in the</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> source, do not create explicitly</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> -- <span class="idiff left">Steffen Moeller <moeller@debian.org> Sun, 25 Jul 2021 18:09:41</span> +0<span class="idiff right">20</span>0</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> -- <span class="idiff left">Nilesh Patra <nilesh@debian.org> Tue, 24 Aug 2021 23:01:00</span> +0<span class="idiff right">53</span>0</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">q2-demux (2020.11.1-1) unstable; urgency=medium</span>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,9 +8,10 @@ Build-Depends: debhelper-compat (= 13),</td>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"> <span class="n" style="color: #333;">dh</span><span class="p">-</span><span class="n" style="color: #333;">python</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">setuptools</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">nodejs</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">npm</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">webpack</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">node</span><span class="p">-</span><span class="n" style="color: #333;">uglifyjs</span><span class="p">-</span><span class="n" style="color: #333;">webpack</span><span class="p">-</span><span class="n" style="color: #333;">plugin</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">node</span><span class="p">-</span><span class="n" style="color: #333;">babel</span><span class="p">-</span><span class="n" style="color: #333;">loader</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="mosel"> <span class="n" style="color: #333;">node</span><span class="p">-</span><span class="n" style="color: #333;">d3</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pytest</span><span class="p">-</span><span class="n" style="color: #333;">cov</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">yaml</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pandas</span><span class="p">,</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -41,7 +42,8 @@ Depends: ${shlibs:Depends},</td>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">ipywidgets</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="mosel"> <span class="n" style="color: #333;">qiime</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="mosel"> <span class="n" style="color: #333;">q2</span><span class="p">-</span><span class="n" style="color: #333;">types</span><span class="p">,</span></span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="mosel"> <span class="n" style="color: #333;">q2templates</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="mosel"> <span class="n" style="color: #333;">q2templates</span><span class="p">,</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="mosel"> <span class="n" style="color: #333;">node</span><span class="p">-</span><span class="n" style="color: #333;">d3</span></span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="mosel"><span class="n" style="color: #333;">Description</span><span class="p">:</span> <span class="n" style="color: #333;">QIIME</span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">plugin</span> <span class="n" style="color: #333;">for</span> <span class="n" style="color: #333;">demultiplexing</span> <span class="k" style="font-weight: 600;">of</span> <span class="n" style="color: #333;">sequence</span> <span class="n" style="color: #333;">reads</span></span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="mosel"> <span class="n" style="color: #333;">QIIME</span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">powerful</span><span class="p">,</span> <span class="n" style="color: #333;">extensible</span><span class="p">,</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">decentralized</span> <span class="n" style="color: #333;">microbiome</span> <span class="n" style="color: #333;">analysis</span></span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="mosel"> <span class="k" style="font-weight: 600;">package</span> <span class="k" style="font-weight: 600;">with</span> <span class="n" style="color: #333;">a</span> <span class="n" style="color: #333;">focus</span> <span class="n" style="color: #333;">on</span> <span class="n" style="color: #333;">data</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">analysis</span> <span class="n" style="color: #333;">transparency</span><span class="p">.</span> <span class="n" style="color: #333;">QIIME</span> <span class="m" style="color: #099;">2</span> <span class="n" style="color: #333;">enables</span></span>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Upstream-Name: QIIME 2</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Source: https://github.com/qiime2/q2-demux/releases</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">Files-Excluded: q2_demux/_summarize/assets/licenses</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Files: *</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Copyright: 2016-2019 QIIME 2 development team</span>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#f9edd2463b2d6ae17d2807a165333128cbd2bc9d"><strong>debian/patches/0001-make-compatible-with-webpack4.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: webpack.config.js in incompatible with webpack4 API, Hence did the needed changes</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Author: Nilesh Patra <nilesh@debian.org></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Last-Update: 2021-08-24</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/q2_demux/_summarize/assets/webpack.config.js</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/q2_demux/_summarize/assets/webpack.config.js</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">@@ -8,19 +8,20 @@</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> var path = require('path');</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> var webpack = require('webpack');</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+const UglifyJsPlugin = require('uglifyjs-webpack-plugin');</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> </span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> module.exports = {</span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ mode: 'production',</span></span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> entry: {</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> app: './src/main.js',</span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- vendor: ['d3']</span></span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> },</span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> plugins: [</span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new webpack.optimize.CommonsChunkPlugin('vendor', 'dist/vendor.bundle.js'),</span></span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new webpack.optimize.UglifyJsPlugin({</span></span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- compress: { warnings: false },</span></span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- mangle: { except: ['init'] }</span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ new UglifyJsPlugin({</span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ uglifyOptions: {</span></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ "warnings": false</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> }),</span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new webpack.NoErrorsPlugin(),</span></span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ new webpack.NoEmitOnErrorsPlugin(),</span></span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> ],</span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> output: {</span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> path: __dirname,</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="p">@@ -32,14 +33,22 @@</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> extensions: ['', '.js']</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> },</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> module: {</span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- loaders: [</span></span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ rules: [</span></span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"> {</span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- loader: 'babel-loader',</span></span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> exclude: /node_modules/,</span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- query: {</span></span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- presets: ['es2015']</span></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ use: [{</span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ loader: 'babel-loader',</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ query: {</span></span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ presets: ['@babel/preset-env']</span></span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"> }</span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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50
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }]</span></span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ }</span></span>
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52
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"> ]</span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"> },</span>
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54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+resolve: {</span></span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ modules: ['/usr/lib/nodejs', '/usr/share/nodejs']</span></span>
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56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+},</span></span>
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57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+resolveLoader: {</span></span>
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58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ modules: ['/usr/lib/nodejs', '/usr/share/nodejs'],</span></span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"> };</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">0001-make-compatible-with-webpack4.patch</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,9 +16,8 @@ export PYBUILD_BEFORE_INSTALL=rm -rvf {build_dir}/q2-demux.egg-* {build_dir}/sit</td>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">override_dh_auto_build:</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> dh_auto_build</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> #cd q2_demux/_summarize/assets && \</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> #webpack --bail</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> make viz-summarize</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> cd q2_demux/_summarize/assets && \</span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> webpack --bail</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">#FIXME: Delaying true testing to auto-pkg-tests since QIIME2 module cannot be registered</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"># at build time.</span>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,3 +2,7 @@</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="yaml"><span class="c1" style="color: #998; font-style: italic;"># i386 CI disabled due to unavailable python3-skbio for i386 architecture</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="yaml"><span class="na" style="color: #008080;">variables</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="yaml"> <span class="na" style="color: #008080;">SALSA_CI_DISABLE_BUILD_PACKAGE_I386</span><span class="pi">:</span> <span class="s2" style="color: #d14;">"</span><span class="s" style="color: #d14;">true"</span></span></pre>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,6 @@ if [ "${AUTOPKGTEST_TMP}" = "" ] ; then</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="shell"><span class="k" style="font-weight: 600;">fi</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cp</span> <span class="nt" style="color: #000080;">-a</span> /usr/lib/python3/dist-packages/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}*</span> <span class="s2" style="color: #d14;">"</span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="s2" style="color: #d14;">"</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="shell"><span class="nb" style="color: #0086b3;">mkdir</span> <span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span>/q2_demux/_summarize/assets/dist</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cd</span> <span class="s2" style="color: #d14;">"</span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="s2" style="color: #d14;">"</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="shell"></span>
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<li id="68ef9f98c01c7eecd4c605cc26048a06f3304b79">
<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">version=4</span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE@-$1.tar.gz%" \</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE@-$1.tar.gz%<span class="idiff left right">,repacksuffix=+dfsg,repack,compression=xz,dversionmangle=auto</span>" \</span>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> https://github.com/qiime2/q2-demux/tags (?:.*?/)?v?(\d[\d.]*)\.tar\.gz</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#e1d4ef669650e83202986861e6740a428b7b1aee"><strong>q2_demux/_summarize/assets/licenses/d3-license.txt</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Copyright 2010-2016 Mike Bostock</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">All rights reserved.</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">Redistribution and use in source and binary forms, with or without modification,</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext">are permitted provided that the following conditions are met:</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext">* Redistributions of source code must retain the above copyright notice, this</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> list of conditions and the following disclaimer.</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext">* Redistributions in binary form must reproduce the above copyright notice,</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> this list of conditions and the following disclaimer in the documentation</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> and/or other materials provided with the distribution.</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> written permission.</span>
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<a href="https://salsa.debian.org/med-team/q2-demux/-/compare/f27dfd15abc3522b64a22d7c15b35f88169966ee...204a7600bf9ca57d2c4c17e9e9ef37c01f8853f7#d6bb17df1f3a430ff0853f91968d4b4bdb5b402a"><strong>q2_demux/_version.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,7 +23,7 @@ def get_keywords():</td>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># setup.py/versioneer.py will grep for the variable names, so they must</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># each be defined on a line of their own. _version.py will just call</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># get_keywords().</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (<span class="idiff left right">HEAD -> master, </span>tag: 2020.11.1)"</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (tag: 2020.11.1)"</span></span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">git_full</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"5769fc493a3a6479b2d648151fb1a10c8b1426fd"</span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python"> <span class="n" style="color: #333;">git_date</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"2020-12-05 20:44:49 +0000"</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">keywords</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="s" style="color: #d14;">"refnames"</span><span class="p">:</span> <span class="n" style="color: #333;">git_refnames</span><span class="p">,</span> <span class="s" style="color: #d14;">"full"</span><span class="p">:</span> <span class="n" style="color: #333;">git_full</span><span class="p">,</span> <span class="s" style="color: #d14;">"date"</span><span class="p">:</span> <span class="n" style="color: #333;">git_date</span><span class="p">}</span></span>
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