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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/htslib">Debian Med / htslib</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/1905c92e5c8a1efb4d4a5752b8f6d41014b1d3d2">1905c92e</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T19:18:28+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: add myself to uploaders
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/f2011817022f3ab20234cb5fd65cc26b8d257e94">f2011817</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T19:18:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/447be1bd0853bdaadf8ea3a1df5eac4ada4fbc3b">447be1bd</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T20:12:57+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: libhts-dev breaks samtools (<< 1.13~)
This is necessary to break britney loop preventing migration to
testing. Thanks Nilesh for the tip!
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/3c03b39075a9b449341aab3d20442cc0d8da0a5c">3c03b390</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T21:59:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: refresh libhts-dev Breaks+Replaces
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/000118d34e16d5d3ca09014a4bc4cffc91703785">000118d3</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T22:01:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: libhts-dev breaks ivar (<< 1.3.1~)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/d9cee5901b477ae4c79af892c78bc9d0e01d2491">d9cee590</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-08-27T22:03:10+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update changelog for unstable
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/htslib/-/compare/98bef59036d226eadce3f3b5d298e9d909dcd12d...d9cee5901b477ae4c79af892c78bc9d0e01d2491#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">htslib</span> <span class="p">(</span><span class="m" style="color: #099;">1.13</span><span class="p">+</span><span class="n" style="color: #333;">ds</span><span class="p">-</span><span class="m" style="color: #099;">2</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">d</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">add</span> <span class="n" style="color: #333;">myself</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">uploaders</span></span>
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<td class="new_line diff-line-num new" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">d</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="n" style="color: #333;">breaks</span> <span class="n" style="color: #333;">samtools</span> <span class="p">(<<</span> <span class="m" style="color: #099;">1.13</span><span class="p">~)</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">d</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">refresh</span> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="n" style="color: #333;">Breaks</span><span class="p">+</span><span class="n" style="color: #333;">Replaces</span></span>
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<td class="new_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">d</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">libhts</span><span class="p">-</span><span class="n" style="color: #333;">dev</span> <span class="n" style="color: #333;">breaks</span> <span class="n" style="color: #333;">ivar</span> <span class="p">(<<</span> <span class="m" style="color: #099;">1.3.1</span><span class="p">~)</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="mosel"> <span class="p">--</span> <span class="err" style="color: #a61717; background-color: #e3d2d2;">É</span><span class="n" style="color: #333;">tienne</span> <span class="n" style="color: #333;">Mollier</span> <span class="p"><</span><span class="n" style="color: #333;">emollier</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Fri</span><span class="p">,</span> <span class="m" style="color: #099;">27</span> <span class="n" style="color: #333;">Aug</span> <span class="m" style="color: #099;">2021</span> <span class="m" style="color: #099;">22</span><span class="p">:</span><span class="m" style="color: #099;">02</span><span class="p">:</span><span class="m" style="color: #099;">59</span> <span class="p">+</span><span class="m" style="color: #099;">0200</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"><span class="n" style="color: #333;">htslib</span> <span class="p">(</span><span class="m" style="color: #099;">1.13</span><span class="p">+</span><span class="n" style="color: #333;">ds</span><span class="p">-</span><span class="m" style="color: #099;">1</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="mosel"> <span class="p">[</span> <span class="n" style="color: #333;">Steffen</span> <span class="n" style="color: #333;">Moeller</span> <span class="p">]</span></span>
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<a href="https://salsa.debian.org/med-team/htslib/-/compare/98bef59036d226eadce3f3b5d298e9d909dcd12d...d9cee5901b477ae4c79af892c78bc9d0e01d2491#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,8 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.</td>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Uploaders: Charles Plessy <plessy@debian.org>,</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Andreas Tille <tille@debian.org>,</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Michael R. Crusoe <crusoe@debian.org>,</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> Steffen Moeller <moeller@debian.org></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> Steffen Moeller <moeller@debian.org>,</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> Étienne Mollier <emollier@debian.org></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 13),</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,10 +29,12 @@ Section: libs</td>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext">Depends: ${misc:Depends},</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> ${shlibs:Depends}</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext">Pre-Depends: ${misc:Pre-Depends}</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext">Replaces: libhts-dev (<< 1.1<span class="idiff left right">1-</span>3)</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext">Replaces: libhts-dev (<< 1.13<span class="idiff left right">~</span>)</span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext">Breaks: python3-pysam (<< 0.15~),</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> libtabixpp (<< 1.0.0-5~),</span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> libhts-dev (<< 1.11-3)</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> libhts-dev (<< 1.13~),</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> samtools (<< 1.13~),</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> ivar (<< 1.3.1~)</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext">Description: C library for high-throughput sequencing data formats</span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> HTSlib is an implementation of a unified C library for accessing common file</span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call</span>
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