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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/phast">Debian Med / phast</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/phast/-/commit/52faefdd44ca1fef0c4c2f48510a88572df88a5c">52faefdd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-08-30T20:57:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#609dbae57e041813d9f4421fd805cc9e191c56a1">
include/bd_phylo_hmm.h
→
include/phast/bd_phylo_hmm.h
</a>
</li>
<li class="file-stats">
<a href="#884472d08cdb5eeec8aa99ffb2b4ef8c6223e7a0">
include/bed.h
→
include/phast/bed.h
</a>
</li>
<li class="file-stats">
<a href="#95dbf5757eca55a8f0ec5f21d919c0311024d203">
include/bgc_hmm.h
→
include/phast/bgc_hmm.h
</a>
</li>
<li class="file-stats">
<a href="#730554749efc818eaac1210369641578f29c458c">
include/category_map.h
→
include/phast/category_map.h
</a>
</li>
<li class="file-stats">
<a href="#92ecebda6469c84dc58657419c7f652aac829a18">
include/complex.h
→
include/phast/complex.h
</a>
</li>
<li class="file-stats">
<a href="#a3fc247c8a4e5464aa7686ce208f9071dee7a745">
include/complex_matrix.h
→
include/phast/complex_matrix.h
</a>
</li>
<li class="file-stats">
<a href="#2841f87214fe20ea557001e7c8a4a4da915bbb02">
include/complex_vector.h
→
include/phast/complex_vector.h
</a>
</li>
<li class="file-stats">
<a href="#f465b14e0b0d08a77202bd06d07ad75a59eedb85">
include/phast_cons.h
→
include/phast/cons.h
</a>
</li>
<li class="file-stats">
<a href="#e63a8ca7afe9fcee70ea452f71eb0a462f21ff56">
include/dgamma.h
→
include/phast/dgamma.h
</a>
</li>
<li class="file-stats">
<a href="#fceb2a612d5707bb15f20924c5d60fcbda9e893c">
include/eigen.h
→
include/phast/eigen.h
</a>
</li>
<li class="file-stats">
<a href="#8cec804e7fd190b4dd3b912ef3cc69fbd53ef15d">
include/em.h
→
include/phast/em.h
</a>
</li>
<li class="file-stats">
<a href="#16652842825b1a03b67f36fad497fd6aae1c37c7">
include/external_libs.h
→
include/phast/external_libs.h
</a>
</li>
<li class="file-stats">
<a href="#6840e7850dde729fc5d79094162595cb4659a605">
include/fit_column.h
→
include/phast/fit_column.h
</a>
</li>
<li class="file-stats">
<a href="#2b7887fa3f7945215d492fc13fb8346c171ef4f3">
include/fit_em.h
→
include/phast/fit_em.h
</a>
</li>
<li class="file-stats">
<a href="#bbdb4cc1b392562c55164441f2b3e9618c2385b9">
include/fit_feature.h
→
include/phast/fit_feature.h
</a>
</li>
<li class="file-stats">
<a href="#f4ebd91fe64d63c50cec7558e01755c6222d6ce5">
include/gap_patterns.h
→
include/phast/gap_patterns.h
</a>
</li>
<li class="file-stats">
<a href="#8aa91cf685389759745539840af796fc24f0ee56">
include/genepred.h
→
include/phast/genepred.h
</a>
</li>
<li class="file-stats">
<a href="#fc38d36fa8740b1bc6c943e3d841da05ef6ccfc7">
include/gff.h
→
include/phast/gff.h
</a>
</li>
<li class="file-stats">
<a href="#85023b728aaecdc7c581b59638cf3f93956ec933">
include/hashtable.h
→
include/phast/hashtable.h
</a>
</li>
<li class="file-stats">
<a href="#917aac82080cc8c6d61d57add56985d64eff3592">
include/hmm.h
→
include/phast/hmm.h
</a>
</li>
<li class="file-stats">
<a href="#1f4ccc50327ff314a4f9245f928f6319dd9cb6f6">
include/indel_history.h
→
include/phast/indel_history.h
</a>
</li>
<li class="file-stats">
<a href="#33c15ca0bd25f4666759b97430901928b7cc8b85">
include/indel_mod.h
→
include/phast/indel_mod.h
</a>
</li>
<li class="file-stats">
<a href="#e0a9e74eeaf34b987de38774f696c3144ddf0e84">
include/list_of_lists.h
→
include/phast/list_of_lists.h
</a>
</li>
<li class="file-stats">
<a href="#884a69791367aed66ce415965dbe1f14d0490248">
include/lists.h
→
include/phast/lists.h
</a>
</li>
<li class="file-stats">
<a href="#fcdb01b17696b64b0461a8090c88e1dd6894507e">
include/local_alignment.h
→
include/phast/local_alignment.h
</a>
</li>
<li class="file-stats">
<a href="#475c0135d2f11c77b802ac5f73ab5b0f1983a7d8">
include/maf.h
→
include/phast/maf.h
</a>
</li>
<li class="file-stats">
<a href="#f6315084c5e60a9a3a998d4f6921e062c8c51627">
include/maf_block.h
→
include/phast/maf_block.h
</a>
</li>
<li class="file-stats">
<a href="#eec628483b777ec92df1ad0c00bd4408fc45e78c">
include/markov_matrix.h
→
include/phast/markov_matrix.h
</a>
</li>
<li class="file-stats">
<a href="#dcd1b54f1ae4a5b062fa4f0f01ad1117bd61936a">
include/matrix.h
→
include/phast/matrix.h
</a>
</li>
<li class="file-stats">
<a href="#8d65458aafc1e8cb03ff9b9134b2e14e2235ecc8">
include/memory_handler.h
→
include/phast/memory_handler.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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