<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Steffen Möller pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/toil">Debian Med / toil</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/toil/-/commit/f4f95f8ae4d33af5ab9f12d1b8af6127098018c4">f4f95f8a</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2021-09-03T18:01:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.4.0</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#b8baf23d7ed7f2b79b86aeb041867428fb196428">
.github/PULL_REQUEST_TEMPLATE.md
</a>
</li>
<li class="file-stats">
<a href="#587d266bb27a4dc3022bbed44dfa19849df3044c">
.gitlab-ci.yml
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#ccd878cd594c7f4853c66e53a9d164a65e83fa2e">
attic/README.md
</a>
</li>
<li class="file-stats">
<a href="#a62b8652a1f9ea532d82804117f6bbdf51425ee7">
common.mk
</a>
</li>
<li class="file-stats">
<a href="#1a86abc3ec747473c3837236573ac86517bdc99e">
<span class="new-file">
+
contrib/admin/cleanup_aws_resources.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#889c91308449c65c309146f6487ae74af64de5e9">
<span class="new-file">
+
contrib/admin/mypy-with-ignore.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#825372bbc36740d224b7c208bff40aeeb49ba422">
<span class="new-file">
+
contrib/admin/remove_trailing_whitespace.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#bcaed0cfe352788008216a2d989dab3fd8f33845">
contrib/admin/test-pr
</a>
</li>
<li class="file-stats">
<a href="#b16e3b559304393db37a93f679677b9978ead818">
<span class="new-file">
+
contrib/toil-cwl-runner/README.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#3a96c4627a12a9924678632542c08aadd2569b52">
<span class="new-file">
+
contrib/toil-cwl-runner/pyproject.toml
</span>
</a>
</li>
<li class="file-stats">
<a href="#dac34f212db53882c82bd8f5ed499a2e23e6cf8b">
<span class="new-file">
+
contrib/toil-cwl-runner/setup.cfg
</span>
</a>
</li>
<li class="file-stats">
<a href="#d3eb57cd1298f23b87693240ab49f197d7a2827b">
<span class="new-file">
+
contrib/typeshed/nacl/__init__.pyi
</span>
</a>
</li>
<li class="file-stats">
<a href="#90cf258fc9476939d6cfab74b7c7b9d1b836d293">
<span class="new-file">
+
contrib/typeshed/nacl/encoding.pyi
</span>
</a>
</li>
<li class="file-stats">
<a href="#3c8b5b2bdee1f50843e3e83842cd0b3bc0dcad57">
<span class="new-file">
+
contrib/typeshed/nacl/secret.pyi
</span>
</a>
</li>
<li class="file-stats">
<a href="#a2c2cab0e737ee53be441859f2ef4f5e9b6f7966">
<span class="new-file">
+
contrib/typeshed/nacl/utils.pyi
</span>
</a>
</li>
<li class="file-stats">
<a href="#a64d77ce34249810fd40c9476d145e6111efe318">
dashboard/prometheus/Dockerfile
</a>
</li>
<li class="file-stats">
<a href="#734cb112ea615891b9ef15d07ae7bc1dee10abc3">
docker/Dockerfile.py
</a>
</li>
<li class="file-stats">
<a href="#07f24fcfb8d1eb555c84915da35f0b51883095b6">
<span class="new-file">
+
docker/singularity-wrapper.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#f99c72d2aacbf31ded1872c66de3f988dced0301">
docs/appendices/environment_vars.rst
</a>
</li>
<li class="file-stats">
<a href="#254a2da7a740675e537439eb88e32083b9ea4771">
docs/conf.py
</a>
</li>
<li class="file-stats">
<a href="#667baeaea6475ae5c7ba52fab4c6a8472a00b81b">
<span class="new-file">
+
docs/contributing/checklists.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#abd8589b4d5ee2ea66ee95d8caf4e8759ffb9ce0">
docs/contributing/contributing.rst
</a>
</li>
<li class="file-stats">
<a href="#5e25feb6b25012c00d6a27af4470f92ec5ccb67b">
docs/developingWorkflows/developing.rst
</a>
</li>
<li class="file-stats">
<a href="#d0153cac95479af9bfb99b746b633bc8255bb53a">
docs/index.rst
</a>
</li>
<li class="file-stats">
<a href="#32be2c2e3690a70b96e3263f2bb4aa0ce226602a">
docs/running/cliOptions.rst
</a>
</li>
<li class="file-stats">
<a href="#8e4430ed91538c989bbba29d0f6541cce24a88d1">
docs/running/cloud/amazon.rst
</a>
</li>
<li class="file-stats">
<a href="#b69aa7c01cb10cb6257fed780ebb62154e4dbc59">
<span class="new-file">
+
docs/running/cloud/dashboard_screenshot.png
</span>
</a>
</li>
<li class="file-stats">
<a href="#70b5c097c4e102be40b0cbc3b0321bdec8cb6e10">
docs/running/cloud/kubernetes.rst
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #666;">
—
<br>
<a href="https://salsa.debian.org/med-team/toil/-/commit/f4f95f8ae4d33af5ab9f12d1b8af6127098018c4">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/toil/-/commit/f4f95f8ae4d33af5ab9f12d1b8af6127098018c4"}}</script>
</p>
</div>
</body>
</html>