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<h3>
Martin Uecker pushed to branch master
at <a href="https://salsa.debian.org/med-team/bart">Debian Med / bart</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1512f4dcdded0b09cfd4acff4647c25cb697653b">1512f4dc</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-07-13T11:26:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Simple MATLAB/Octave Unit Test (#227)
* Added simple MATLAB/Octave Unit Test
* Added function header</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/af9d4e32029ad6cb30943cd0bbac9ce1290c9c5d">af9d4e32</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-07T19:43:32+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Removed not necessary omp atomics (#230)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/db597b10d34d52adff97bdfe71f43045374f7052">db597b10</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-10T10:07:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fixed missing linop_free() for local intermediate variable (#232)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/86026f3523f26cbe7ac5464fb2dc6a580deef722">86026f35</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-10T10:08:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Added parallelization to linear phase calculatulation in NUFFT preparation (#233)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/162be15969e598da00408c2dcb63afa22b50f433">162be159</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-10T18:57:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">opts: add support for long options
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1f99a8718d03c02abebbebea555a084baad3b99e">1f99a871</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-10T18:57:13+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">opts: complete long options
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9f0d78f718d1eaa8861291faf400c467ddebd6cb">9f0d78f7</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-08-10T19:06:42+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor updates
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b46d2641520968ce4527f249fbe1287c07c4151a">b46d2641</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-08-10T19:14:14+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add random tube phantom (with -N <num>) (#231)
* add random tube phantom (with -N <num_tubes>)
* phantom: for random tubes, shrink tube size as trials increases
* phantom: for random tubes, warn if >200 tubes are being created
* phantom: random tubes errors out if runtime is too long
* phantom: random tubes -- fix bg in circle check and use circle intersection checks
* simplify to circles only</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7c80e9f2d609cc559960c1cc2936218ee55e74a9">7c80e9f2</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-11T10:25:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Changed estimate_im_dims() to always round up (#234)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9ea47b4ae66af1732367d8d0893dbd128e12a52b">9ea47b4a</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-11T13:13:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Added support for non squared image sizes to nlinv (#236)
* Added support for non squared image sizes
* Restructured to avoid else clause</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3ef460e2a001060287b4178367d3da1e9ec2ff52">3ef460e2</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">misc/mmio.c: add newlines to error messages
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0bd78907ffe75d9cf55a7ad804770b58691927dc">0bd78907</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">src/mmio.c: whitespace
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5d7e9c027ded363d65cb14f1f58acbba03df42f3">5d7e9c02</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">misc: add file_type enum and function
This leads to a bit less duplicated code in the
create_cfl and load_cfl functions.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b33d3758bf2097ae200d4095face372e34135fe3">b33d3758</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">misc: unlink already opened files
In order to properly support identical input and output in all our
tools, we now remove the input file if it is later opened for writing.
This necessitates that we always create the output files
after all inputs, but this is the logical order anyway.
Since we have a private memory-mapping to the input, we can remove
the file from the filesystem and overwrite it with the output.
Caveat: This might not work on Windows.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/11b0a3c0ae2ee40f663f77418d0770160f8ed2c8">11b0a3c0</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">misc/io: io_unregister removes all IOs of that name
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9af42665cbafd0615535f2c165568c7e70de6391">9af42665</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-11T13:14:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">join.c: now works with automatically unlinking files
Since we actually do want to append to an input, we cannot
remove it before creating the output.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0b4a836dd521cc8ac4dc28d5c962973b8e656255">0b4a836d</a></strong>
<div>
<span>by Martin Krämer</span>
<i>at 2020-08-11T16:05:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Changed to apply oversampling after image size estimation (#237)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/439ef513217362afdb0c0f8b2c5b4ccf6e950958">439ef513</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-12T16:38:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">iter/iter5.c: fix typo
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6d4c51e738e8b8daebbd283a00cdc32223c42a1d">6d4c51e7</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-08-12T16:38:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add a zsmax prox operator
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/640712ca2244e822ecd4b2d2ae2155cb712b16a5">640712ca</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-08-12T16:38:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">bump join limit
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d47f3e22905fdacbd6d5b98cabd4ed554d5c641a">d47f3e22</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-08-12T16:38:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add operator framework (with contribs. by M. Blumenthal)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/67f5577fa4f5137abc71f31d99eb7329a056f5b1">67f5577f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-08-12T16:38:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update vecops
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/55f38c6bea9bd71f60a076428b654f13670e6b38">55f38c6b</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-12T20:56:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix bart version
Since git version v2.11, git describe does not always use 7 characters
for its commit hash. This broke bart version parsing, which always
expected 7 characters.
So now git-version.sh forces 7 characters, and additionally the parsing
now accepts up to 40 characters in the commit hash.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/24cf7569aec07cddd01c27a809243ff0186bf857">24cf7569</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-08-12T20:56:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add version test
Just to see if bart can parse its own version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/624cf7d7bda2d082478d90a1f48a339d4c076ee2">624cf7d7</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-08-16T00:11:44-07:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">phantom: for random tubes, use full background and tweak tube size
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e52b2f139efac82c34a43c3ba1e8839ee464c483">e52b2f13</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-08-21T11:44:25+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">modified the SMS scaling to reproduce results in the SMS moba T1 paper
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/72b72baf4f8112e64e295f4698699fa30b4ef81d">72b72baf</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-08-22T07:32:15+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use md_zexpj in linear_phase
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6194478fcc12cbaf14b8a9922e1806b99969f984">6194478f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-06T09:21:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix compatibility with SSA-FARY paper
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/4d389014dd310e579a014e26b4d40ff38498f974">4d389014</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-06T09:21:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change debug level for argument linking
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5094eb292e1e44c3d89830723c2b0699d85ca58f">5094eb29</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-06T09:22:20+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">ESPIRiT GPU test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c520c368f610fe65067ceead036ab06f6d37e7ef">c520c368</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-09-06T09:28:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv.c: free nufft_op
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e439518c9b035769d0cba6a2719dd03dce1ccb0a">e439518c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-06T10:35:41+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax utest
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d5115f512695711e5408647b9448c4959ff331ad">d5115f51</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-15T11:04:51+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix admm wrapped in itop (thanks to Zhengguo Tan)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/242b4c31362ea8b7841fb460805d9658b013f0e2">242b4c31</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-09-15T13:59:38+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Makefile: make parallelism configurable (edited by M.U.)
use $(MAKE) and add PARALLEL_NJOBS variable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e7cc414ad5a1a085b0ef2a93042ea607b027a41a">e7cc414a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-19T13:54:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix some undefined behaviour
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0f8fd35bc0b1746edfa5389a3f98c318bd9c30ba">0f8fd35b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-09-19T13:54:43+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">code style issues
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/67c3b5095b9e39c4e9dc7484121680b75400dadc">67c3b509</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T08:56:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge empty dimensions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/10c2ce9bc970e5da5c3462cbf600d1a12d09fdbc">10c2ce9b</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Parallelization cost depending on tensorsize
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b67130ab9a9f23b273d916af038e2338f09169dc">b67130ab</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Optimize md_copy2
1.) Reduce the number of cuda_memcpy calls for filling:
Old:
[abc]->[abcxxxxxxxxx]->[abcabcxxxxxx]->[abcabcabcxxx]->[abcabcabcabc]
new:
[abc]->[abcxxxxxxxxx]->[abcabcxxxxxx]->[abcabcabcabc]
2.)
Use cuda_memcpy_strided in more cases by permuting dims wit inputstrides
= 0 to the end
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/fb5e598c1d2e367ea4c8515c079258ae529b87eb">fb5e598c</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refactor fill-case of md_copy2
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f4ba6dec02b1c9efe0ac701c827254cbeb00761d">f4ba6dec</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Don't split dims on gpu
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/29e0c0b3936e69930df49b309cbc03ed279eb70e">29e0c0b3</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Turn off parallelization for h2d and d2h copies
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/11b1c115c138af2d9220f98aebe1b6843a078c14">11b1c115</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T09:24:05+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/eba5010c4d8fb7708b2859c7af0a6019560c30af">eba5010c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T10:24:06+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update geometry lib
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3edb1e636c9e7936bf05e1327ed3557db3914e8c">3edb1e63</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T10:28:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update unit tests for prox operators (thx Xiaoqing Wang)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/409842167dd72721f49d70809f45b62d7d42ca08">40984216</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T10:33:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">gitlab CI
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0a815ed34bd426dbaf4ff4cd0053f82cf349726e">0a815ed3</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T17:07:26+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update blas interface
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/67a53739f365d77cb0bb8ea4d1ae3e355f063aad">67a53739</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-10-04T17:10:03+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">version: support dirty no-git version format
If the git command cannot be found or if git describe
fails for any reason, git-version.sh generates a
version string such as
v0.6.00-dirty
This commit allows the version command to properly parse
such a version string.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9fa8da71bf48e3551747c5e2da0248a8380bb645">9fa8da71</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-04T17:10:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">OMP= in versio
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/53fc3f2d162356137bddb2b57c60c0b669775e31">53fc3f2d</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-10-05T11:12:17+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix memory-leak in nlop_chain
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0502c142b3f742b719f5e157a8ed69822b8860cd">0502c142</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-05T11:12:22+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Simplify cast to work on operators
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/284c74798eab2b388ba1acbd456fc2373968e3a4">284c7479</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-10-05T11:18:44+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">moba: add the model-based T2 mapping part
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5fe1c1cff0e88fa2620a2ad84f683f7f19f27873">5fe1c1cf</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-10-05T11:19:00+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax the tolerance for moba l2 regularization and fix some dimension issue for moba T1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b8c2953fb6d28fa3fe502b0288d66e3c518b2459">b8c2953f</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-10-05T11:19:11+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">moba: add the option to switch off the auto_norm of parameter maps for thresholding
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f6c3f416d81d72b346df33c864e000a92205e6fc">f6c3f416</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T11:24:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix copyrights
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f03800c99ff367e15b8d24e506d9696489afd7e0">f03800c9</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T13:59:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">signal tool
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/36d8c6cc3b1b0c62bbe1d607bd80e0ebd1e514ca">36d8c6cc</a></strong>
<div>
<span>by Nick Scholand</span>
<i>at 2020-10-05T14:09:41+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Create utest for analytical signals.
IR bSSFP and IR FLASH up to now.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3eeaa936871fb4ee4c9d4ca89d16ff6b7481fbe5">3eeaa936</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T14:09:41+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add tests for model-based reconstruction (thx Xiaoqing Wang)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/06d4689334c00660ae7b3f865f25ef46f3df74bd">06d46893</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T14:10:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use iter4 interface in moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a9dd4375d6e35f5c355fe3d92b625ba76a73e28d">a9dd4375</a></strong>
<div>
<span>by Nick Scholand</span>
<i>at 2020-10-05T14:14:15+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor
simplify normal fista.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/2637934dae23dc37a4d584967889435b49ddec9a">2637934d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T14:16:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rename local function
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a84f371e2706b650ba506f5987f1eaa5e79672f1">a84f371e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T14:18:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor style change
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/dbfe26cfb340e68d1c3e728687ddc55429bef2e5">dbfe26cf</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T14:22:36+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor change
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7e46b948d1c1e5ca39fb7f92eaf32766326ebe0d">7e46b948</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T15:05:45+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">assertion + comment
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c0d57f1c0d9823896f47788a229cc18ce826a779">c0d57f1c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T18:47:45+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">BLAS accelerated strided operations
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3752655ff2d9097ed663c5312e16e0713cff1e80">3752655f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-05T18:48:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add noise std test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9de86314c508960feac8cfbb8517d784c8a3abc6">9de86314</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-10-07T21:52:29+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Optimize make_3op_scalar
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f05e5a7db898bf3b9ab09687b031a1c357d0a49c">f05e5a7d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-07T22:06:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">test flpmath stides optimizations
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f5ed3a0f84158ac2101588a64da448fcfd5d5b08">f5ed3a0f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-09T07:11:27+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add some more md functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cf167328126fa7d61c9e8f519fe1ac9e8a27deef">cf167328</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-09T07:21:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add optimization for strides
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0dad4934ec5c86c7b696ffe7c51197518acb5038">0dad4934</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-09T07:44:46+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor change
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/12d21a54cad723d3ab7abd1941b1e3af09b59903">12d21a54</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-09T07:46:21+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rename utest
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3833681e563283fad51fdae7471b76c7cf86ac0e">3833681e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-31T21:32:20+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix incorrect dims
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/60a862be0e43567d80f8d1341b13aaf002a47400">60a862be</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-10-31T21:40:34+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">coding style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5202aac237afd35d3dc6ad13894195cd69aa77da">5202aac2</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-01T15:31:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">stricter array bounds and fixed
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/2a4205ba5dfb349648b0ef1bfe197b6aebfb1b66">2a4205ba</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:32+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft_adjoint: split for lower memory consumption
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c2e83c680562624442921f414cdd87c4dbb66854">c2e83c68</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft_adjoint: support noncontiguous ksp access
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cd56ef2ce661d2a671f28b0889d96e82550d098d">cd56ef2c</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add tests for new lowmem option
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/51e5e6b152c21c8e593bfd9a4aeef4f59c66f985">51e5e6b1</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">lowmem2 fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f23364a1c0fafeb422ed3f80b3fdead7b1844298">f23364a1</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update debug output
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/779ce23b4c2ffec712b08cf9ac84215f97aedcc1">779ce23b</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T13:45:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">lowmem2: sum over extra dimensions in k-space
should further reduce memory consumption
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/fa443e838981fa2e2ea20707d0c33f6adb33b294">fa443e83</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T14:55:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft_adjoint: move split calculation to new function
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3197c5065b4977df56c0a39d0d6458602778706e">3197c506</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T14:55:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft: merge lowmem2 into lowmem
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/149e2398cafd382de7cceefea792360bda2c8c5e">149e2398</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T14:55:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft: remove unused bool lowmem
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c18c3868096f9f3a65e663e8627c0541a49e1156">c18c3868</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-05T14:55:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nlinv: optionally use lowmem for nufft objects
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0df20f7f99f759ff086f840da44a042c1679e8df">0df20f7f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T14:16:35+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">readability and debug output
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/8789914907b18685a219d3602a14dcbbd90dbc2a">87899149</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T14:16:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add low-mem nufft tests
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/31b0933e32031bd0c80c8abcf37d8a026eda3d7b">31b0933e</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-08T15:03:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Make op_p chain working on gpu
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7189e800bf7e6599055a40645085b74af890d37a">7189e800</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T15:07:58+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">style and comment
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/859f9bc4add97a7218c088494965fe605abe08f4">859f9bc4</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T15:13:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">correctly null-terminate argument list after parsing arguments
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/84181954d5fbccfec41a7fc8d3676bb378acd4ce">84181954</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T16:19:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">implement warmstart for lsqr
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d177cd2f73f98f0556553f1e5863537838db3e3e">d177cd2f</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-11-08T16:19:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add one unit test case for warmstart
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a7cf7e8f8c3b88b03701e9742a8dbd0e810790be">a7cf7e8f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T16:19:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">simplify test, make more robust, new interface
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/8e3e3105f0b4de3e0c6e0b7e8f120e77a3053408">8e3e3105</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T16:37:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix lsqr initialization
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6f7065a82e0091538c6048b706f5de208ea64813">6f7065a8</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-08T17:10:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">for parallelization, relax test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/86c7367c50d15c161bf269b59789ac8752a2c0af">86c7367c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T10:49:50+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax test some more
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/2c3eb7d16d425d95c6e5566a53b9c26b69cdeb98">2c3eb7d1</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T12:15:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update multi-echo signal
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5821fad664ae30375dd314d1b4ba5d67a03c1ed8">5821fad6</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T14:06:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">implement continuation for lsqr/itop
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9f2710cdd3aeecb9a4f3b6c792956121c9448677">9f2710cd</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T14:07:50+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor whitespace change
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/da055d487910691af88307850d5c71dab35639c9">da055d48</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T14:18:50+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">refactor config for model-based recons
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/020d3411e893e869789f0c01ffaa80ee338045fe">020d3411</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T17:19:56+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">styles fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c74e81b0184f217ff61d78f9facf851e00dff171">c74e81b0</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T20:06:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor floating point tweak for golden-ratio trajectories
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1ad4b763ed82940e6d4ad464215ce916071e9c16">1ad4b763</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T20:06:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">estdelay: export to file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9e8fb9a3600b9ea3e478e7291c7363d1c6d9eed1">9e8fb9a3</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T20:08:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">multi-echo trajectory & reading of gradient delays from file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/14b943637ee2ccad8843a6f62184aa0b31a57bb8">14b94363</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T22:03:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">model-based recon for multi-echo FLASH
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5b1578f9433c8a9dd565e2156e6d7339f032afe8">5b1578f9</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T22:03:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">integrate meco model into moba tool
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/98c36990d2529f90ce98e12caff9e94d67cf4364">98c36990</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T22:03:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">meco test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/32b9a67127ce0760e669045c6b0425969199989e">32b9a671</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-09T22:03:54+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9a594b24318752a9fd30be3c74e2efc9509df783">9a594b24</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-11T12:00:22+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/596211ba8fd81dc41b00e1cf7f618054f0424ae8">596211ba</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">noncart/nufft: properly propagate the lowmem flag
Otherwise, it will not be used in the calculation of the psf, which can
often be the largest nufft performed.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/259a6927258a8e1fce64dc3c6f30c0da9fa1cf13">259a6927</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">noncart/nufft: lower debug level for split adjoint
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/772e05a162caf1546bcb6ae260205eab4265aa5e">772e05a1</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add test to check if lowmem actually reduces memory
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/36a680e92b0581e5e1e0e807e1c3ecb4c364a1ab">36a680e9</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change test to check signficiant mem reduction
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/68a01c8a9d445013a4de605e8e661951e4fffc37">68a01c8a</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change to test to avoid bc
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/590fde0e2c487e6c1042b99e504213988ede43c3">590fde0e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">nufft memory usage in no-lowmem branch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a41604a3a5c37b5ba853dea4a2e9b95183354ec7">a41604a3</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">set bash shell for lowmem test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/bf69ba3dcccdbec685d4a43744a8a915c7a944a3">bf69ba3d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-14T12:24:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">do not run moba tests by default
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/ba98fc5464c24f1ca593aec24ddcff21d2c6a2a7">ba98fc54</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-14T13:30:05+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "add tests for new lowmem option"
(lowmem tests should not duplicate existing tests but directly
compare lowmem vs no-lowmem)
This reverts commit cd56ef2ce661d2a671f28b0889d96e82550d098d.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/84195c45576b01da6bf5e232d4c9c78f558cb52e">84195c45</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-14T14:54:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">avoid out-of-bounds access
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/eb254b5ae5fc6f9762686198c8f7aa3e894015d7">eb254b5a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-28T12:15:22+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">turn-off as it fails for CI
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/565db173d1a0b2764c3070ef3cd9f18cfb9303d5">565db173</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:17:52+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Index for nlop der/adj functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cc532416f40d4f24e5f669602127a60edeab5676">cc532416</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:18:01+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add operator_ref for bind, attach, loop and copy
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/700b340b49cec3c3f8e0b95f802b38ce4bbfc85a">700b340b</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:26:18+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix memory leak and improve operator_apply_parallel_unchecked
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/54f2502d7056e06de8cbcc03996170f4ea1a17f5">54f2502d</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:44:53+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Change io_flag bitmask to VLA of booleans
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/33b1fe1bf3c6091651591767346efb962e0fe6a3">33b1fe1b</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:45:12+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refactor operator reshape
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c73f68d2e3e4041bfb7c77fd503a8a5042b18627">c73f68d2</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:46:27+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Linop_plus by operator_plus
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/02c845bdbbec99b6e1b683f0ca086a58e6078aac">02c845bd</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-11-28T12:47:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add operator_p functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/8a7fc7b618c774db1c1949cbed22d27677ef87e2">8a7fc7b6</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-28T13:02:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix some coding style issues
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/38c53d7fc5892d41ded5f51f6bda5c5b413e1ff1">38c53d7f</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-11-28T17:45:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/09b5e5c99198c4bc8556fe7c72e8dec0813a077d">09b5e5c9</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-12-04T17:43:47-06:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax test (pass on MacOS)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/19f6b1218479f5c66ad078686df788f8ee05f077">19f6b121</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-12-04T19:40:46-06:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change uint to unsigned int (fixes #240)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/2bf63b674828c42697c078ea805d5806c734171b">2bf63b67</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-12-05T21:08:46-06:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">shut up warning
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0f06b3a9b647b68901c1af71e10d87479886aa1d">0f06b3a9</a></strong>
<div>
<span>by Jon Tamir</span>
<i>at 2020-12-05T21:09:10-06:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d13fc4d6d98290b1be431c8cd834f39d2de35cca">d13fc4d6</a></strong>
<div>
<span>by Moritz Blumenthal</span>
<i>at 2020-12-22T13:15:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Reshape linear operators
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/52fad1f2f20870a3b917ecd2e8711c3cb1a76a22">52fad1f2</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-12-22T13:18:00+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix the linop reshape
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5b2478aac04ea11097fb219340ce3eef7539bc86">5b2478aa</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-22T13:25:18+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">POS regularization: allows for higher dims
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/bca22204eabeb18bb1d3b5b6e385f2e606e5564c">bca22204</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-22T13:25:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add an unit test case for POS regularization
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e7f8a725573c27c3ed2de4d9bfbc23c86d7d2c5d">e7f8a725</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-22T13:26:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove dump_cfl
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1faee6ce12f4c6944229ab641bb7048d581aa97b">1faee6ce</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:31:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">scale all maps up after recon
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/24b30dad7e3777ee1d8b81d2988d2ebca901faba">24b30dad</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:32:02+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update regularization options
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/73dc4bf24656beb9d6c2301b2c97f1a0ea6c4480">73dc4bf2</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:33:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use optreg conf
- to assist processing regularization options for moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/766900d1d90bf47668ec8635629cb770bd64e9a0">766900d1</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:33:44+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">allow for multi-echo reconstruction for MGRE
- basically multi-echo parallel imaging using NLINV
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a1818192656c4d05deb9cd8c1e4f7b42e899cb71">a1818192</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:36:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update moba meco test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6233602be18940f48af98580432ed6b6aa6771b9">6233602b</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:54:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">enable cartesian k-space data in moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3d74fd478dbf695188f1850773706ebb92c28840">3d74fd47</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:54:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">cartesian meco traj
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f5fe230875ef09ca19107630888f9d7506e0d7eb">f5fe2308</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2020-12-23T21:54:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6184270a0f2ca267e528fe2969e1a03bb1f377fb">6184270a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-25T09:24:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">document use of Bessel's correction in md functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/430351f26ea7cc3966669eecdbe36a405a9df7a3">430351f2</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-25T09:24:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">minor
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cb11a429c18d0e0ea76ca85e3b726c3a2f4eec1b">cb11a429</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-25T23:41:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove void* argument in loop functions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9c125a4bed1c12a04e165f51120cfb1d60841e59">9c125a4b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-25T23:49:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">white space fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/24cf745acf715f0d53c6ecaf04080b3812cf8474">24cf745a</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2020-12-26T21:47:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">standardize use_gpu variable name
As far as I can see, all top-level command files now use use_gpu
as their variable name for GPU usage.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/548f6b0e728e2b1b7710195dafc60c81db44abcf">548f6b0e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T13:24:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add flags option to linop sum
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1043956c3f8859cae58c6eca3279f50f6848833f">1043956c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T13:24:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rename linop_sum to linop_avg and add sum
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d901403e08fdba50b5b537ed974ffb93d94dffd7">d901403e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T13:24:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">make dimension independent
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9ecd499ce1ea24bafcae21abf4c9a5d5de12ab14">9ecd499c</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T13:24:53+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add const to iter config
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5214f6f947d35c8477a3c4f461a112e20497183a">5214f6f9</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2020-12-28T14:56:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">ops.c:allow the operator_stack along an arbitrary dimension (with Moritz Blumenthal)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a252ff185bc6a6a23d823d3cd537fdb43c11d735">a252ff18</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T14:56:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">white space fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/45b3b200dbbdc62806c81f475dc691a7bb89b5b5">45b3b200</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-28T14:56:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update unit tests
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b78b3956a7ed8a155e8c9ac3c2aca2bc9a463ae8">b78b3956</a></strong>
<div>
<span>by mblum</span>
<i>at 2020-12-28T18:37:16+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Express linop_reshape by operator_reshape
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0aa9ea53ef347eda0e8f9dccdc0d25a09fd41638">0aa9ea53</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-29T11:20:27+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">redefine SWAP macro
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/bb7d99dd14e7268894ce4ba9b9d54c6b3680ab62">bb7d99dd</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2020-12-29T11:32:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">coding style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/158938107bc27012d2523099a817bc48ab55c18b">15893810</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T15:31:11+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add missing md_zslessequal
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e888d51a67eb43678915ad08de2526c692489594">e888d51a</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:06:54+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add pixelfit
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/14fb3a0581e5602f16b81f484bfe25b6131df459">14fb3a05</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:07:07+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">relax test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/610809dfdf3afd91a4b6bfe344f325df9c9f7d78">610809df</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T17:07:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">pixelfit updates
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b95a6cf0a2340d782ef4ca2f38b1b79b6f3cf03e">b95a6cf0</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T17:07:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rename pixelfit -> mobafit
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7456b1c6b7ddc696130ec98b84246c74be4f7166">7456b1c6</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T17:07:46+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">tighten test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/950b3a5de5742b12e297a37175f84f69b1a578f4">950b3a5d</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T17:07:55+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add stat tools
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b9c642ece1b7b3c252120f4a0ee608ca967ee3c5">b9c642ec</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:22:06+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update fat 1H MR spectrum
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/4f8f4b20d1b4c8e528b4a77f511b1380996c7748">4f8f4b20</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:22:14+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix and rename
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/624cd3af7a7e5bde0829f8197b470d8c15e79005">624cd3af</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:22:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">simulate fat component
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b889d1b71e08f4f7dc6142d70b837288b07de49c">b889d1b7</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T17:22:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update test cases
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7f25fa0011991a5163ed6b87612c99777c9c6fd8">7f25fa00</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2021-01-03T17:33:40+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix a memory leak in moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/ce40bb7403098fba677de1603356744aaa191a4a">ce40bb74</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2021-01-03T17:33:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">unify psf gridding in moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/572bfe94ca13791215cbb26e03ff38e8b0708c69">572bfe94</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2021-01-03T17:33:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">simplify T1fun and T2fun in moba
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/21775d2d696a4cac01baf476c713b2eeea8dd640">21775d2d</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-01-03T23:02:30+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">lib order
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/9dde2ad43921951d1b45cd1a525b78935c7f0547">9dde2ad4</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-03T23:07:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add option for k-space filter
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b1ae4161558565c5978c38ba91fe40bd35f26a07">b1ae4161</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-04T08:51:33+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">missing test dependencies
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a28c18aa6f2c21906144522a79f5227567c22e28">a28c18aa</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-04T15:00:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">do not use memopt init for GPUs
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/1bd4ea422e0491e8f0441e0b6e4787c050dd29dc">1bd4ea42</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2021-01-15T17:48:46+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add support for BART_COMPAT_VERSION
This allows the use of an environment variable to control
compatibility behavior of BART to old versions (using e.g
BART_COMPAT_VERSION="v0.5.00").
So far, this has only an effect on the golden angle calculation
in the trajectory.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/44e18d668bc2ca6717776032b98c0355d2316ad7">44e18d66</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-15T21:47:22+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">update FFT-based convolutions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cba53c81b6c75616b30c2e340b4dff8f18976436">cba53c81</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-15T23:41:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Conway's game of life
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c2069733a8100307d4cb48c7be396877ac34b024">c2069733</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2021-01-16T17:12:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix use_compat_to_version()
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/105f41e98e13f29213448097fe7cb5fe078c7caa">105f41e9</a></strong>
<div>
<span>by Siddharth Srinivasan</span>
<i>at 2021-01-28T09:26:32+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bug fix for cartesian moba (#243)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/f931b97afd0090a92aadda55f6b6f44b334de08a">f931b97a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-28T23:40:46+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add alpha_min0 option for iter4_irgnm2
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/336a48bfb37f59a2907a606fcf1536f3d635f4b7">336a48bf</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-01-28T23:46:55+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">coding style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/c37a8551f58270ea06be0b690732232825b6cc1a">c37a8551</a></strong>
<div>
<span>by Yaël Balbastre</span>
<i>at 2021-01-31T09:13:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix: add target for libismrm.a if ISMRMRD enabled (#244)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7a292fd89b343a5d982632fb8fc008618a3c2380">7a292fd8</a></strong>
<div>
<span>by Nick Scholand</span>
<i>at 2021-02-02T21:48:34+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">QuantMap::Add binary thresholding for mask creation.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/630932973812ea5681d7e87460de6834df1d70ec">63093297</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-02T21:57:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rewrite hard and binary thresholding to use absolute value
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/609df9a0ecccbcc17887920d7eb8a92a92f36e52">609df9a0</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-03T20:55:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">test linearity of adjoint nufft
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/3385907aab71571d1ecf80e854d22e32b676e394">3385907a</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-07T22:25:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">coding style
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/a139b2c0ab22c92f4ea13fbd459fecc0e593ab8e">a139b2c0</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-07T22:35:03+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add warning for dirty git versions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/b4f8b67eb271916affc9afdbfb94dd15743090bd">b4f8b67e</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-12T09:11:52+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">change cuda default path
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/0676133696ed32ec59b2fdfce80b58f03eca6155">06761336</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-12T09:13:56+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">clang fixes
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/cf15be80cdc3346f2519c0bbdfeb771d400d2e39">cf15be80</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-12T09:39:03+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">extend ci
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/bb6703b5746e867f7897dabde19465a2dde5bc10">bb6703b5</a></strong>
<div>
<span>by Monius</span>
<i>at 2021-02-12T10:57:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add support for IBM POWER9 HPC ppc64le
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/7d90203b62746ec01a8c2658acd64f2c1e82087f">7d90203b</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-12T10:59:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">rename HPC to SCALAPACK
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/535bba9b72a9a5f897eef2f26897df865460c89e">535bba9b</a></strong>
<div>
<span>by Siddharth Srinivasan</span>
<i>at 2021-02-12T11:02:28+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">wshfl: Add fista option (#245)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5873cb0b09858b22d07da053a4190298df7df9c1">5873cb0b</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">moba: make coil smoothness configurable
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/6b23e1764474746280994c057a31028bd72fac69">6b23e176</a></strong>
<div>
<span>by Christian Holme</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">misc/opts: add missing OPTL_CLEAR
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d35ca140a4034c85e89e05a4557cb070d3a011b1">d35ca140</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add command-line option for alpha_min0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/762da30b5aea196800dae97276e68f194ff3db6c">762da30b</a></strong>
<div>
<span>by Xiaoqing Wang</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use the signal tool to simulate the IR Look-Locker FLASH Dictionary
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/49d447da2d55bebdb193555809318bb2bf943a7f">49d447da</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">enable switch to another fat spectrum
- moba uses '--fat_spec_0' as the switch
- default spectrum is FAT_SPEC_1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/e1991487de3826b96e4cfebb65fbf7902ac62a6d">e1991487</a></strong>
<div>
<span>by Zhengguo Tan</span>
<i>at 2021-02-12T11:20:09+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">signal: add option for off resonance
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/85961069461bc254aef881a15e8f90ebd9523d6c">85961069</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-02-26T20:02:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">correct typo
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/d1b0e576c3f759089915565d5bf57832acf7b03e">d1b0e576</a></strong>
<div>
<span>by Martin Uecker</span>
<i>at 2021-03-01T15:17:01+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">bump version
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<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/5bdd1948b5148fce08fed60c57283464bbefee0c">5bdd1948</a></strong>
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<span>by Martin Uecker</span>
<i>at 2021-09-13T18:38:01+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge tag 'v0.7.00'
version 0.7.00
Changes:
- new tools: signal mobafit roistat pol2mask conway
- signal: tool to simulate MRI signals
- mobafit: tool for point-wise fitting
- roistat: tool to compute ROI statistics
- pol2mask: tool to compute masks from polygons
- conway: Conway's game of life
- moba: model-based recon for multi-echo FLASH
- moba: model-based T2 mapping
- moba: make coil smoothness configurable
- moba: add option for k-space filter
- moba: enable cartesian k-space data in moba
- wshfl: Add fista option
- estdelay: export to file
- traj: multi-echo trajectory
- traj: reading of gradient delays from file
- phantom: random tube phantom
- nlinv: non squared image sizes
- generic: additional tests and unit tests
- generic: continuous integration for gitlab
- generic: support for BART_COMPAT_VERSION
- generic: warning for dirty git versions
- generic: target for libismrm.a if ISMRMRD enabled
- generic: support for IBM POWER9 HPC ppc64le
- generic: MATLAB/Octave test
- library: add support for long options
- library: new functions: md_zslessequal
- library: linop_reshape_in, linop_reshape_out
- library: generalized linop_sum
- library: operator_stack along an arbitrary dimension
- library: new zsmax prox operator
- library: continuation for lsqr/itop
- library: warmstart for lsqr
- library: BLAS accelerated strided operations
- library: add more geometry functions
- library: more operator_p helper functions
- many other bug fixes and improvements
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<strong><a href="https://salsa.debian.org/med-team/bart/-/commit/79a4ca89aab524758940c70bfa71d070013c5ee2">79a4ca89</a></strong>
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<span>by Martin Uecker</span>
<i>at 2021-09-13T18:40:25+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patches
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.gitlab-ci.yml
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Makefile
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<a href="#69e27356ef629022720d868ab0c0e3394775b6c1">
README
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<a href="#cce3fa6afca48b577589d6b335c9e129eaa5b6f7">
debian/patches/0001-makefile-change-for-compatibility-with-debian.patch
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debian/patches/0002-remove-empty-directory.patch
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debian/patches/0003-deactivate-ode-unit-tests.patch
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debian/patches/0004-remove-lib64-suffix-for-cuda-library-paths.patch
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debian/patches/series
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git-version.sh
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src/bart.c
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src/bench.c
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src/bitmask.c
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src/cabs.c
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src/caldir.c
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src/calib/calib.c
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src/calmat.c
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src/cdf97.c
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src/conj.c
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src/conv.c
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src/copy.c
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