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GitLab

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<h3>

Michael R. Crusoe pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/bamtools">Debian Med / bamtools</a>

</h3>

<h4>

Commits:

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<strong><a href="https://salsa.debian.org/med-team/bamtools/-/commit/a769207c680ae01e91c38a7f0a2ec4909d6f31e5">a769207c</a></strong>

<div>

<span>by Michael R. Crusoe</span>

<i>at 2021-09-17T15:17:36+02:00</i>

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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.2+dfsg</pre>

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<h4>30 changed files:</h4>

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<li class="file-stats">

<a href="#fe77d5d1439f26e353a42bbd38dece2467ff6558">

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+

.github/workflows/build.yml

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<li class="file-stats">

<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">

CMakeLists.txt

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<li class="file-stats">

<a href="#bccb95457e86072a42cfc7510adec5a8351566e1">

docs/Doxyfile

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<li class="file-stats">

<a href="#631c8d07f5ea23b9a9f6c57f5389dfcf94bc33b7">

src/CMakeLists.txt

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<li class="file-stats">

<a href="#9796668945ce4458c931cfc12a2f2ef494201e75">

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−

src/ExportHeader.cmake

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<li class="file-stats">

<a href="#7b9395a6562d65b5c238c3cc981cb59c11dec559">

src/api/BamAlignment.cpp

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<li class="file-stats">

<a href="#88e1ca0baac576ab1b9c2f9a0601b82106b183c8">

src/api/BamAlignment.h

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<li class="file-stats">

<a href="#d386dc86c53f97c5ce5e39acc98ad3028683bf2f">

src/api/BamAux.h

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<a href="#da1d0ef7a238a2d20709355e1658bd121b63b03e">

src/api/BamConstants.h

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<a href="#7c2df3bf0b070bc025803e1fbd671bd43c29eaec">

src/api/CMakeLists.txt

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<a href="#642abb6c978c74f7c09f17d6aa85a59e6e417909">

src/api/SamHeader.cpp

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<li class="file-stats">

<a href="#ad3405b12d53edd856242212485fc823bce43979">

src/api/SamHeader.h

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<li class="file-stats">

<a href="#901ed4046d2eb44dd10453ca6e13f8eafc293b67">

src/api/SamProgram.cpp

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<li class="file-stats">

<a href="#ec0961b124b67970091de01152dab30b3ee07da8">

src/api/SamProgram.h

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<a href="#1d11e6cb507dbb0db085f8c0c16814cab22a29fb">

src/api/SamProgramChain.cpp

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<a href="#867d5fa8dc5ba47ffdd0ab42e1a018c4f4e334d8">

src/api/SamProgramChain.h

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<a href="#4d03b982c7bef44b2f696fc24bde4e269e727232">

src/api/SamReadGroup.cpp

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<a href="#fd7da38fc73ee0024bf49f600178f96a85f140a7">

src/api/SamReadGroup.h

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<li class="file-stats">

<a href="#2631ba9d212e0c04fe08899a5deb2ba81dbc7e52">

src/api/SamReadGroupDictionary.cpp

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<li class="file-stats">

<a href="#71e5670996cd0c432ae5e96c482b6289e77bab67">

src/api/SamReadGroupDictionary.h

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<li class="file-stats">

<a href="#d4ff7185d478a20c07876c59773557406a059b19">

src/api/SamSequence.cpp

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<li class="file-stats">

<a href="#2a0962face61f9bd01ecced0b0c827b79ba9ef11">

src/api/SamSequence.h

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<li class="file-stats">

<a href="#c9c1021fbeae361d9955358775a6efb53fdad8d6">

src/api/SamSequenceDictionary.cpp

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<li class="file-stats">

<a href="#4d7bd08f10f7645a4dd4f3d5e9e6a16febbea336">

src/api/SamSequenceDictionary.h

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<li class="file-stats">

<a href="#20724b171032a38bb5417ac2862b837130d84876">

src/api/algorithms/Sort.h

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<li class="file-stats">

<a href="#4855d1dc6742ebf53b1cd840b4af48d0289a3bb3">

src/api/api_global.h

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<li class="file-stats">

<a href="#b55bfebd489f150d78948d79f032d9d79fcab634">

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−

src/api/internal/CMakeLists.txt

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<li class="file-stats">

<a href="#35ec2c1da14fe0b43e81fddeaf54a639bbccdd08">

src/api/internal/bam/BamHeader_p.cpp

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<li class="file-stats">

<a href="#bfa0b096d7272a8845a26c0196aad2a6f4a92662">

src/api/internal/bam/BamHeader_p.h

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<li class="file-stats">

<a href="#1e05d9ca7774de531e6119b1bdbf75fe0ddf0789">

src/api/internal/bam/BamMultiMerger_p.h

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<h5>The diff was not included because it is too large.</h5>

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