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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-nanoget">Debian Med / python-nanoget</a>
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<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/ffd7b61fc1b7ac50b9505d037c26d78a665a9204">ffd7b61f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-11T10:48:33+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix watchfile to detect new versions on github
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/1f3e058d9b7ab261661990985802c1227d276f08">1f3e058d</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-10-11T10:48:43+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.6.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/8bfb8a2f21964c1b9ce8fa359834630047be70e1">8bfb8a2f</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-10-11T10:48:50+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Apply multi-arch hints.
+ python3-nanoget-examples: Add Multi-Arch: foreign.
Changes-By: apply-multiarch-hints
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-nanoget/-/commit/90bf31065361e3229b71ad3a38143ba137ce3736">90bf3106</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-10-11T10:51:53+02:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Autopkgtest is failing
</pre>
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/3710a792e896ce932f7650c43227e158c3adc256...90bf31065361e3229b71ad3a38143ba137ce3736#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">python-nanoget (1.12.2-5) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Fix watchfile to detect new versions on github</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Standards-Version: 4.6.0 (routine-update)</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Apply multi-arch hints.</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> + python3-nanoget-examples: Add Multi-Arch: foreign.</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> TODO</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">autopkgtest [08:50:12]: test run-unit-test: [-----------------------</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">[E::idx_find_and_load] Could not retrieve index file for 'nanotest/alignment.bam'</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">Binary files nanotest/alignment.bam.bai_orig and nanotest/alignment.bam.bai differ</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">Fail</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">autopkgtest [08:50:16]: test run-unit-test: -----------------------]</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">autopkgtest [08:50:16]: test run-unit-test: - - - - - - - - - - results - - - - - - - - - -</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext">run-unit-test FAIL non-zero exit status 1</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Mon, 11 Oct 2021 10:48:33 +0200</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">python-nanoget (1.12.2-4) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> * Move test scripts to examples</span>
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<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/3710a792e896ce932f7650c43227e158c3adc256...90bf31065361e3229b71ad3a38143ba137ce3736#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,7 +10,7 @@ Build-Depends: debhelper-compat (= 13),</td>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> python3-biopython,</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> python3-nanomath,</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> python3-pysam</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">5</span>.0</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">6</span>.0</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/python-nanoget</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/python-nanoget.git</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">Homepage: https://github.com/wdecoster/nanoget</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -47,6 +47,7 @@ Architecture: all</td>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext">Section: python</span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext">Depends: ${misc:Depends},</span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext">Enhances: python3-nanoget</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext">Multi-Arch: foreign</span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext">Description: example data for python3-nanoget (dealing with Oxford Nanopore data)</span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> The Python3 module nanoget provides functions to extract useful metrics</span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> from Oxford Nanopore sequencing reads and alignments.</span>
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<a href="https://salsa.debian.org/med-team/python-nanoget/-/compare/3710a792e896ce932f7650c43227e158c3adc256...90bf31065361e3229b71ad3a38143ba137ce3736#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,4 +5,4 @@ version=4</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"># Outdated tags on Github</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"># see https://github.com/wdecoster/nanoget/issues/19</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">opts="filenamemangle=s%(?:.*?)?v?(\d[\d.]*)\.tar\.gz%@PACKAGE@-$1.tar.gz%" \</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> https://github.com/wdecoster/nanoget/releases .*/<span class="idiff left right">archive/</span>v?@ANY_VERSION@\.tar\.gz</span></pre>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> https://github.com/wdecoster/nanoget/releases .*/v?@ANY_VERSION@\.tar\.gz</span></pre>
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