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<h3>
Étienne Mollier pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-biopython">Debian Med / python-biopython</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/3f62def32dafbddfc1a93fd4d8cb707cfadad1ac">3f62def3</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/40e2966fa298acaf32940514e85405cf31cf3364">40e2966f</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.79+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/ce23f8313769dc4270dcd54b6afc5039086cc736">ce23f831</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove constraints unnecessary since buster
* Build-Depends: Drop versioned constraint on dssp and ncbi-blast+.
Changes-By: deb-scrub-obsolete</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/1a4aa75bce39902f18a0d2b35af07ae24c1c0d7d">1a4aa75b</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:47+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove blastdbv4-impl.patch; applied upstream
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/4b585c6e9477f8cade2896ed0a35a770a7159d3d">4b585c6e</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove stabilize-phyml-test.patch; applied upstream
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/14d20cd552d667258586da27182187f811ecafef">14d20cd5</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T22:36:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove spelling-error-in-binaries.patch; applied upstream
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/ac93a469f558ed7f3cab3f4eabd347e6dad16a70">ac93a469</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-11T23:43:39+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">refresh mkdssp4.path
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/445b3aab8fdb09b54b522716749efdf595bd82d7">445b3aab</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-12T00:02:23+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">left todo item
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/d58b43a2c2d9474dfe5bc0ed85a39ea624294d5d">d58b43a2</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-13T21:12:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">mkdssp4.path: remove diagnostic output
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/9bf83bc81f8ca771b4ac664608cdbef905bb677b">9bf83bc8</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-15T22:13:33+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">mkdssp4.path: skip failing test for the time being
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/ea5f7cedb4e5f8f4a9dde193339487e2785a3614">ea5f7ced</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-15T22:16:19+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">renamed mkdssp4.patch, fixing typo in file name
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/6963255028afff27cd5f800fc945a568275f6aba">69632550</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-16T11:54:59+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add adjust-test_GraphicsBitmaps.patch
The test is normally skipped, due to missing font in renderpm, but
its error message changed shape, and was not caught anymore by the
logic of the skip.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/e6f8168024bd6ff60515e4994099b52105155406">e6f81680</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-16T12:23:40+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/copyright: update years per LICENSE file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/cf181d11f23e544618f488af90dc6891c76cce60">cf181d11</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-16T12:28:14+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add spelling.patch; fix spelling-error-in-binary
caught by lintian
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/144a264287e0ee49cc675ccfb56f3e5f9e912d8b">144a2642</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-16T12:30:31+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">mkdssp4.patch: update author's email address
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-biopython/-/commit/955331683926a4b741af8ff819e972de46ab042c">95533168</a></strong>
<div>
<span>by Étienne Mollier</span>
<i>at 2021-10-16T12:41:37+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">wrap up changelog to upload to experimental
</pre>
</li>
</ul>
<h4>24 changed files:</h4>
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.circleci/config.yml
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<a href="#3ac517dad11a750eb4733a0cf5eb375d247f3116">
.flake8
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<a href="#e7d14d429f898757a423156de0e8c49d75240694">
.pre-commit-config.yaml
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<a href="#fb16db094d3c24440707b3f1095dd7cf60253835">
.travis-tox.ini
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<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
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<a href="#05777ad225b1353b06e31e8d8c13b30a58f09963">
Bio/Affy/CelFile.py
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<a href="#d7754918e6821db6ffea065687599ec4f11a8e2d">
Bio/Align/AlignInfo.py
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Bio/Align/Applications/__init__.py
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Bio/Align/__init__.py
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<a href="#d35d74bcb1ddcae7733e401b6740af8d05d4a482">
Bio/Align/_aligners.c
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Bio/Align/substitution_matrices/__init__.py
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Bio/AlignIO/ClustalIO.py
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Bio/AlignIO/EmbossIO.py
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Bio/AlignIO/FastaIO.py
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Bio/AlignIO/Interfaces.py
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Bio/AlignIO/MafIO.py
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Bio/AlignIO/MauveIO.py
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Bio/AlignIO/MsfIO.py
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Bio/AlignIO/NexusIO.py
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Bio/AlignIO/PhylipIO.py
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Bio/AlignIO/StockholmIO.py
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Bio/AlignIO/__init__.py
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Bio/Application/__init__.py
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Bio/Blast/Applications.py
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<h5>The diff was not included because it is too large.</h5>
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