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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-csb">Debian Med / python-csb</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/711b96d172e0adfed90b29848e93af83486ab905">711b96d1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:37:28+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix watchfile to detect new versions on github
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/c82f9bacf9e09987055845f46954c3673aaf9b59">c82f9bac</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Standards-Version: 4.6.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/1a2966dc590f3ae8257d267ed4acf47d5b1727f8">1a2966dc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:48+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/e19f601dc811d06eade3cbb483283d236716bab5">e19f601d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:51+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Add salsa-ci file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/a2e685b33e5c16fc3ddf6d79e07ad8d0468acd48">a2e685b3</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:51+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/793bffd0df0020051c9ef89d969e1f041a9f7ec2">793bffd0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:52+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.
Changes-By: lintian-brush
Fixes: lintian: upstream-metadata-missing-bug-tracking
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html
Fixes: lintian: upstream-metadata-missing-repository
See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/4868c1855737fbf789436d39def0199a2f672ca5">4868c185</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:38:53+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.
Changes-By: lintian-brush
Fixes: lintian: uses-deprecated-adttmp
See-also: https://lintian.debian.org/tags/uses-deprecated-adttmp.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-csb/-/commit/ca435c6dd709cab858e70ff9a06de3b10929e550">ca435c6d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-10-18T15:42:29+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
</li>
</ul>
<h4>6 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#b1dbf22e88351ec0d5d1d1a7f53295504b480e61">
<span class="new-file">
+
debian/salsa-ci.yml
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<li class="file-stats">
<a href="#42fab651e04972106e51b8230ef5dd472c36c6c0">
debian/tests/build
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">python-csb (1.2.5+dfsg-6) unstable; urgency=medium</span>
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<td class="new_line diff-line-num new" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Fix watchfile to detect new versions on github</span>
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<td class="new_line diff-line-num new" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Standards-Version: 4.6.0 (routine-update)</span>
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<td class="new_line diff-line-num new" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * debhelper-compat 13 (routine-update)</span>
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<td class="new_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Add salsa-ci file (routine-update)</span>
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<td class="new_line diff-line-num new" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Rules-Requires-Root: no (routine-update)</span>
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<td class="new_line diff-line-num new" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> Repository-Browse.</span>
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<td class="new_line diff-line-num new" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Replace use of deprecated $ADTTMP with $AUTOPKGTEST_TMP.</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Mon, 18 Oct 2021 15:38:57 +0200</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">python-csb (1.2.5+dfsg-5) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> [ Matthias Klose ]</span>
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<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,17 +5,18 @@ Uploaders: Tomas Di Domenico <tdido@tdido.com.ar>,</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Testsuite: autopkgtest-pkg-python</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">2</span>),</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">3</span>),</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> dh-python,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> python3-all,</span>
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> python3-numpy,</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> python3-scipy,</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> python3-matplotlib,</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> python3-setuptools</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">4</span>.0</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">6</span>.0</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/python-csb</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/python-csb.git</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Homepage: https://github.com/csb-toolbox/CSB</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Package: python3-csb</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Architecture: all</span>
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<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#b1dbf22e88351ec0d5d1d1a7f53295504b480e61"><strong>debian/salsa-ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="nn" style="color: #555;">---</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">include</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml</span></span></pre>
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<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#42fab651e04972106e51b8230ef5dd472c36c6c0"><strong>debian/tests/build</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,9 +2,9 @@</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="python"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="nb" style="color: #0086b3;">set</span> <span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">eu</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="python"><span class="n" style="color: #333;">cp</span> <span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">r</span> <span class="n" style="color: #333;">csb</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">test</span> <span class="s" style="color: #d14;">"$A<span class="idiff left right">DT</span>TMP/"</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="python"><span class="n" style="color: #333;">cp</span> <span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">r</span> <span class="n" style="color: #333;">csb</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">test</span> <span class="s" style="color: #d14;">"$A<span class="idiff left right">UTOPKGTEST_</span>TMP/"</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="python"><span class="n" style="color: #333;">cd</span> <span class="s" style="color: #d14;">"$A<span class="idiff left right">DT</span>TMP"</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="python"><span class="n" style="color: #333;">cd</span> <span class="s" style="color: #d14;">"$A<span class="idiff left right">UTOPKGTEST_</span>TMP"</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="python"><span class="k" style="font-weight: 600;">for</span> <span class="n" style="color: #333;">py</span> <span class="ow" style="font-weight: 600;">in</span> <span class="err" style="color: #a61717; background-color: #e3d2d2;">$</span><span class="p">(</span><span class="n" style="color: #333;">py3versions</span> <span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">i</span><span class="p">);</span> <span class="n" style="color: #333;">do</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"> <span class="n" style="color: #333;">PYTHONWARNINGS</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">d</span> <span class="err" style="color: #a61717; background-color: #e3d2d2;">$</span><span class="n" style="color: #333;">py</span> <span class="n" style="color: #333;">test</span><span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">app</span><span class="p">.</span><span class="n" style="color: #333;">py</span> <span class="o" style="font-weight: 600;">--</span><span class="n" style="color: #333;">generated</span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">resources</span> <span class="o" style="font-weight: 600;">/</span><span class="n" style="color: #333;">tmp</span> <span class="o" style="font-weight: 600;">--</span><span class="n" style="color: #333;">verbosity</span> <span class="mi" style="color: #099;">2</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="n" style="color: #333;">done</span></span></pre>
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<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Bug-Database: https://github.com/csb-toolbox/CSB/issues</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">Bug-Submit: https://github.com/csb-toolbox/CSB/issues/new</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> - Name: OMICtools</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Entry: OMICS_09827</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,4 +9,5 @@ Registry:</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> Entry: SCR_016065</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> - Name: conda:bioconda</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> Entry: csb</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext">Repository: https://github.com/csb-toolbox/CSB</span></pre>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">Repository: https://github.com/csb-toolbox/CSB.git</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">Repository-Browse: https://github.com/csb-toolbox/CSB</span></pre>
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<a href="https://salsa.debian.org/med-team/python-csb/-/compare/9dadf67392f94e31f885a88beec4ee842c94c344...ca435c6dd709cab858e70ff9a06de3b10929e550#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">version=4</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">opts="repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g" \</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> https://github.com/csb-toolbox/CSB/releases .*/<span class="idiff left right">archive/</span>R@ANY_VERSION@@ARCHIVE_EXT@</span></pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> https://github.com/csb-toolbox/CSB/releases .*/R@ANY_VERSION@@ARCHIVE_EXT@</span></pre>
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