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<h3>
Nilesh Patra pushed to branch master
at <a href="https://salsa.debian.org/med-team/plink">Debian Med / plink</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/d81491dbcd423a1e51f160c3523f897c15f27a59">d81491db</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T20:58:39+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add patch to fix FTBFS with gcc-11 (Closes: #984293)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/b6f9eeb03749a38019d2c08aeab1d2e672a8e3d2">b6f9eeb0</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T20:58:58+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump Standards-Version to 4.6.0 (no changes needed)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/bfff5885e39c9bda43c384cf0125e9bbde2e204f">bfff5885</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T20:59:01+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Bump debhelper compatibility level to 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/06e91bb4e89b89cd193a56958c23f93ac2700e97">06e91bb4</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T20:59:54+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Replace ADTTMP with AUTOPKGTEST_TMP
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/17b3ecd9b98773f62ba179dcc829fde04f6c60e6">17b3ecd9</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T21:01:43+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add "Rules-Requires-Root: no"
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/plink/-/commit/9ec46570f979877494c9c9edf585314c7b69068b">9ec46570</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-10-31T21:02:07+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#f38d99f8398b7290799cca649a21e6f07a117391">
<span class="new-file">
+
debian/patches/gcc11.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#5cc37fd93ea78de7fa21d0db40d2e809ed627fc3">
debian/tests/run-sample-analysis
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/plink/-/compare/90d40f887c06a24d3a36ae636ba373f04109e01d...9ec46570f979877494c9c9edf585314c7b69068b#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">plink (1.07+dfsg-4) unstable; urgency=medium</span>
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<td class="new_line diff-line-num new" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<td class="new_line diff-line-num new" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<td class="new_line diff-line-num new" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Add patch to fix FTBFS with gcc-11 (Closes: #984293)</span>
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<td class="new_line diff-line-num new" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * Bump Standards-Version to 4.6.0 (no changes needed)</span>
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<td class="new_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Bump debhelper compatibility level to 13</span>
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<td class="new_line diff-line-num new" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Replace ADTTMP with AUTOPKGTEST_TMP</span>
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<td class="new_line diff-line-num new" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Add "Rules-Requires-Root: no"</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> -- Nilesh Patra <nilesh@debian.org> Sun, 31 Oct 2021 21:01:46 +0530</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">plink (1.07+dfsg-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> [ Helmut Grohne ]</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/plink/-/compare/90d40f887c06a24d3a36ae636ba373f04109e01d...9ec46570f979877494c9c9edf585314c7b69068b#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,12 +6,13 @@ Uploaders: Steffen Moeller <moeller@debian.org>,</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> Dylan Aïssi <daissi@debian.org></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">2</span>),</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">Build-Depends: debhelper-compat (= 1<span class="idiff left right">3</span>),</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> zlib1g-dev</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">4.1</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">6.0</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/plink</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/plink.git</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">Homepage: http://zzz.bwh.harvard.edu/plink/</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">Rules-Requires-Root: no</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Package: plink</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Architecture: any</span>
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<li id="f38d99f8398b7290799cca649a21e6f07a117391">
<a href="https://salsa.debian.org/med-team/plink/-/compare/90d40f887c06a24d3a36ae636ba373f04109e01d...9ec46570f979877494c9c9edf585314c7b69068b#f38d99f8398b7290799cca649a21e6f07a117391"><strong>debian/patches/gcc11.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: Declare operator as const to fix gcc11 FTBFS</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Author: Nilesh Patra <nilesh@debian.org></span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984293</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Last-Update: 2021-10-31</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/plink.h</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/plink.h</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="p">@@ -387,7 +387,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> template<></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> class less<Locus*> {</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> public:</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- bool operator()(Locus const* p1, Locus const* p2)</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ bool operator()(Locus const* p1, Locus const* p2) const</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> // Locus comparison based first on distance, </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/homozyg.cpp</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/homozyg.cpp</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="p">@@ -33,7 +33,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> template<></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> class less<Segment*> {</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> public:</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- bool operator()(Segment const* s1, Segment const* s2)</span></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ bool operator()(Segment const* s1, Segment const* s2) const</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> if ( s1->start > s2->start ) return true;</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> else if ( s1->start < s2->start ) return false;</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="p">@@ -70,7 +70,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"> template<></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> class less<Pool*> {</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> public:</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- bool operator()(Pool const* p1, Pool const* p2)</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ bool operator()(Pool const* p1, Pool const* p2) const</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> if ( p1->segs.size() > p2->segs.size() ) return true; </span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/genogroup.h</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/genogroup.h</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="p">@@ -42,7 +42,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"> template<> class less<MultiLocusGenotype*> {</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"> public:</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> bool operator()(MultiLocusGenotype const* p1, </span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- MultiLocusGenotype const* p2) {</span></span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ MultiLocusGenotype const* p2) const {</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"> if (!p1)</span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"> return true;</span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"> if (!p2)</span></pre>
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<a href="https://salsa.debian.org/med-team/plink/-/compare/90d40f887c06a24d3a36ae636ba373f04109e01d...9ec46570f979877494c9c9edf585314c7b69068b#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">30_endiandetection.patch</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">gcc-4.7.patch</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Fix_spelling_error.patch</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">gcc11.patch</span></pre>
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<a href="https://salsa.debian.org/med-team/plink/-/compare/90d40f887c06a24d3a36ae636ba373f04109e01d...9ec46570f979877494c9c9edf585314c7b69068b#5cc37fd93ea78de7fa21d0db40d2e809ed627fc3"><strong>debian/tests/run-sample-analysis</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,11 +5,11 @@</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;"># Last-Update: 2015-01-24</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="shell"><span class="nv" style="color: #008080;">pkg</span><span class="o" style="font-weight: 600;">=</span>plink</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="shell"><span class="k" style="font-weight: 600;">if</span> <span class="o" style="font-weight: 600;">[</span> <span class="s2" style="color: #d14;">"</span><span class="nv" style="color: #008080;">$A<span class="idiff left right">DT</span>TMP</span><span class="s2" style="color: #d14;">"</span> <span class="o" style="font-weight: 600;">=</span> <span class="s2" style="color: #d14;">""</span> <span class="o" style="font-weight: 600;">]</span> <span class="p">;</span> <span class="k" style="font-weight: 600;">then</span></span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="shell"><span class="k" style="font-weight: 600;"> </span><span class="nv" style="color: #008080;">A<span class="idiff left right">DT</span>TMP</span><span class="o" style="font-weight: 600;">=</span><span class="sb" style="color: #d14;">`</span><span class="nb" style="color: #0086b3;">mktemp</span> <span class="nt" style="color: #000080;">-d</span> /tmp/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}</span><span class="nt" style="color: #000080;">-test</span>.XXXXXX<span class="sb" style="color: #d14;">`</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="shell"><span class="k" style="font-weight: 600;">if</span> <span class="o" style="font-weight: 600;">[</span> <span class="s2" style="color: #d14;">"</span><span class="nv" style="color: #008080;">$A<span class="idiff left right">UTOPKGTEST_</span>TMP</span><span class="s2" style="color: #d14;">"</span> <span class="o" style="font-weight: 600;">=</span> <span class="s2" style="color: #d14;">""</span> <span class="o" style="font-weight: 600;">]</span> <span class="p">;</span> <span class="k" style="font-weight: 600;">then</span></span>
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9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="shell"><span class="k" style="font-weight: 600;"> </span><span class="nv" style="color: #008080;">A<span class="idiff left right">UTOPKGTEST_</span>TMP</span><span class="o" style="font-weight: 600;">=</span><span class="sb" style="color: #d14;">`</span><span class="nb" style="color: #0086b3;">mktemp</span> <span class="nt" style="color: #000080;">-d</span> /tmp/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}</span><span class="nt" style="color: #000080;">-test</span>.XXXXXX<span class="sb" style="color: #d14;">`</span></span>
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="shell"><span class="k" style="font-weight: 600;">fi</span></span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cd</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">DT</span>TMP</span></span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cp</span> <span class="nt" style="color: #000080;">-a</span> /usr/share/doc/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}</span>/examples/<span class="k" style="font-weight: 600;">*</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">DT</span>TMP</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cd</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">UTOPKGTEST_</span>TMP</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="shell"><span class="nb" style="color: #0086b3;">cp</span> <span class="nt" style="color: #000080;">-a</span> /usr/share/doc/<span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">pkg</span><span class="k" style="font-weight: 600;">}</span>/examples/<span class="k" style="font-weight: 600;">*</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">UTOPKGTEST_</span>TMP</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="shell"><span class="nv" style="color: #008080;">PLINK_TEST</span><span class="o" style="font-weight: 600;">=</span><span class="s1" style="color: #d14;">'plink1 --noweb --file test'</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="shell"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,5 +21,5 @@ diff plink.frq expected.plink.frq</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="shell"><span class="nv" style="color: #008080;">$PLINK_TEST</span> <span class="nt" style="color: #000080;">--assoc</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="shell">diff plink.assoc expected.plink.assoc</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="shell"></span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="shell"><span class="nb" style="color: #0086b3;">rm</span> <span class="nt" style="color: #000080;">-f</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">DT</span>TMP</span>/<span class="k" style="font-weight: 600;">*</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="shell"><span class="nb" style="color: #0086b3;">rm</span> <span class="nt" style="color: #000080;">-f</span> <span class="nv" style="color: #008080;">$A<span class="idiff left right">UTOPKGTEST_</span>TMP</span>/<span class="k" style="font-weight: 600;">*</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="shell"></span></pre>
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