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<h3>

Étienne Mollier pushed to branch master

at <a href="https://salsa.debian.org/med-team/lastz">Debian Med / lastz</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/lastz/-/commit/360023084b9af30835e9e7086d8ff2cac8d7eaea">36002308</a></strong>

<div>

<span>by Étienne Mollier</span>

<i>at 2021-11-02T22:21:52+01:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add gcc11.patch

Closes: #984081

</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/lastz/-/commit/4b80d63220a5cc8a0b2ddf7c7df20d2b3c48cb3f">4b80d632</a></strong>

<div>

<span>by Étienne Mollier</span>

<i>at 2021-11-02T22:56:51+01:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Edit propagate_cflags.patch to propagate CPPFLAGS

</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/lastz/-/commit/872a1c7c721cb096befd1d059d9cec5745778bb0">872a1c7c</a></strong>

<div>

<span>by Étienne Mollier</span>

<i>at 2021-11-02T23:08:46+01:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/control: lastz-examples depends on python3

The initial setting about depending on the dynamic python3:Depends

substvar does not seem to provide python3 anymore, so using a

hardcoded dependency instead.

</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/lastz/-/commit/6fa527dd3b0dedb41579461eb41ec832a79e26d9">6fa527dd</a></strong>

<div>

<span>by Étienne Mollier</span>

<i>at 2021-11-02T23:13:59+01:00</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">ready to upload to unstable

</pre>

</li>

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<h4>5 changed files:</h4>

<ul>

<li class="file-stats">

<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">

debian/changelog

</a>

</li>

<li class="file-stats">

<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

debian/control

</a>

</li>

<li class="file-stats">

<a href="#f38d99f8398b7290799cca649a21e6f07a117391">

<span class="new-file">

+

debian/patches/gcc11.patch

</span>

</a>

</li>

<li class="file-stats">

<a href="#d4eaf78ba7fd6549693a8523a6f0bc34d43581a2">

debian/patches/propagate_cflags.patch

</a>

</li>

<li class="file-stats">

<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">

debian/patches/series

</a>

</li>

</ul>

<h4>Changes:</h4>

<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">

<a href="https://salsa.debian.org/med-team/lastz/-/compare/e0920a8745831a26441c142d85c830be8d189982...6fa527dd3b0dedb41579461eb41ec832a79e26d9#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>

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1

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">lastz (1.04.15-2) unstable; urgency=medium</span>

</pre>

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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>

</pre>

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">  * Team upload.</span>

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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">  * Add gcc11.patch.  (Closes: #984081)</span>

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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">  * Edit propagate_cflags.patch to propagate CPPFLAGS as well.</span>

</pre>

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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext">  * d/control: lastz-examples explicitly depends on python3:any.</span>

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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>

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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> -- Étienne Mollier <emollier@debian.org>  Tue, 02 Nov 2021 23:12:52 +0100</span>

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>

</pre>

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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">lastz (1.04.15-1) unstable; urgency=medium</span>

</pre>

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2

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">  [ Steffen Moeller ]</span>

</pre>

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<br>

</li>

<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

<a href="https://salsa.debian.org/med-team/lastz/-/compare/e0920a8745831a26441c142d85c830be8d189982...6fa527dd3b0dedb41579461eb41ec832a79e26d9#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,7 +23,7 @@ Description: pairwise aligning DNA sequences</td>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"></span>

</pre>

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Package: lastz-examples</span>

</pre>

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">Architecture: all</span>

</pre>

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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext">Depends: ${python3:Depends}, ${misc:Depends}</span>

</pre>

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">Depends: <span class="idiff left right">python3:any, </span>${python3:Depends}, ${misc:Depends}</span>

</pre>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext">Multi-Arch: foreign</span>

</pre>

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext">Description: pairwise aligning DNA sequences (examples and test scripts)</span>

</pre>

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> LASTZ is a drop-in replacement for BLASTZ, and is backward compatible with</span>

</pre>

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<br>

</li>

<li id="f38d99f8398b7290799cca649a21e6f07a117391">

<a href="https://salsa.debian.org/med-team/lastz/-/compare/e0920a8745831a26441c142d85c830be8d189982...6fa527dd3b0dedb41579461eb41ec832a79e26d9#f38d99f8398b7290799cca649a21e6f07a117391"><strong>debian/patches/gcc11.patch</strong></a>

<hr>

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: fix ftbfs with gcc 11</span></span>

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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"> Inspired from upstream commit d00249da148a011a8c2d819f702356908859c51c.</span>

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Author: Étienne Mollier <emollier@debian.org></span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Bug: https://github.com/lastz/lastz/issues/42</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984081</span></span>

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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">Applied-Upstream: d00249da148a011a8c2d819f702356908859c51c</span></span>

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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="p">Last-Update: 2021-11-02</span></span>

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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="p">---</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="p">This patch header follows DEP-3: http://dep.debian.net/deps/dep3/</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- lastz.orig/src/sequences.c</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ lastz/src/sequences.c</span></span>

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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="p">@@ -3621,7 +3621,7 @@</span></span>

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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> //----------</span>

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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> </span>

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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> static int find_2bit_sequence    (seq* _seq, char* name);</span>

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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-static u32 read_2bit_index_entry (seq* _seq, char seqName[256], u32 seqNum);</span></span>

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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+static u32 read_2bit_index_entry (seq* _seq, char seqName[maxSequenceName+1], u32 seqNum);</span></span>

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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"> </span>

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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"> //--- read_2bit_header ---</span>

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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> </span>

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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- lastz.orig/src/sequences.h</span></span>

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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ lastz/src/sequences.h</span></span>

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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="p">@@ -192,7 +192,7 @@</span></span>

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"> //</span>

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> //----------</span>

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> </span>

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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#define maxSequenceName     100</span></span>

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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#define maxSequenceName     255</span></span>

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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> #define maxSequenceHeader   992</span>

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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> #define seqBufferSize       (maxSequenceHeader+32)</span>

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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> #define maxFastqSequenceLen 10000</span></pre>

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<br>

</li>

<li id="d4eaf78ba7fd6549693a8523a6f0bc34d43581a2">

<a href="https://salsa.debian.org/med-team/lastz/-/compare/e0920a8745831a26441c142d85c830be8d189982...6fa527dd3b0dedb41579461eb41ec832a79e26d9#d4eaf78ba7fd6549693a8523a6f0bc34d43581a2"><strong>debian/patches/propagate_cflags.patch</strong></a>

<hr>

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1

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="diff"><span class="p">Author: Andreas Tille <tille@debian.org></span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC2" class="line" lang="diff"><span class="p">Last-Update: Mon, 15 Jun 2020 11:47:45 +0200</span></span>

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="diff"><span class="p">Description: Propagate DEB_CFLAGS_MAINT_APPEND  = -Wno-stringop-truncation</span></span>

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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"> Also LDFLAGS is added to propagate remaining hardening options</span>

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"> Also LDFLAGS is added to propagate remaining hardening options.</span>

</pre>

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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"> .</span>

</pre>

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5

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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"> Later edited to add support for preprocessor flags (CPPFLAGS).</span>

</pre>

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<td class="new_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">Reviewed-By: Étienne Mollier <emollier@debian.org></span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="p">Last-Update: 2021-11-02</span></span>

</pre>

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5

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"></span>

</pre>

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<td class="new_line diff-line-num old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff">--- <span class="idiff left right">a</span>/src/Makefile</span>

</pre>

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<td class="new_line diff-line-num old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ <span class="idiff left right">b</span>/src/Makefile</span></span>

</pre>

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<td class="old_line diff-line-num old" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="new_line diff-line-num old" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="p">@@ -71,7 +71,7 @@</span><span class="idiff left right"> VERSION_FLAGS= \</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff">--- <span class="idiff left right">lastz.orig</span>/src/Makefile</span>

</pre>

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ <span class="idiff left right">lastz</span>/src/Makefile</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="p">@@ -71,7 +71,7 @@</span></span>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="diff">  -DSUBVERSION_REV="\"${SUBVERSION_REV}"\"</span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="diff"> </span>

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<td class="old_line diff-line-num" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="diff"> </span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,7 +17,20 @@ Description: Propagate DEB_CFLAGS_MAINT_APPEND  = -Wno-stringop-truncation</td>

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<pre style="margin: 0;"> <span id="LC17" class="line" lang="diff"> </span>

</pre>

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<pre style="margin: 0;"> <span id="LC18" class="line" lang="diff"> </span>

</pre>

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<pre style="margin: 0;"> <span id="LC19" class="line" lang="diff"> srcFiles = lastz infer_scores \</span>

</pre>

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<td class="old_line diff-line-num old" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="new_line diff-line-num old" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC17" class="line" lang="diff"><span class="p">@@ -101,13 +101,13 @@</span> incFiles = lastz.h infer_scores.h \</span>

</pre>

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<td class="new_line diff-line-num new" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="p">@@ -91,23 +91,23 @@</span></span>

</pre>

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<td class="new_line diff-line-num new" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff">            utilities.h dna_utilities.h sequences.h capsule.h</span>

</pre>

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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> </span>

</pre>

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<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

23

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"> %.o: %.c version.mak ${incFiles}</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

24

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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ${CC} -c ${CFLAGS} -Dscore_type=\'I\' $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

25

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ${CC} ${CPPFLAGS} -c ${CFLAGS} -Dscore_type=\'I\' $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

26

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> </span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

27

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> %_D.o: %.c version.mak ${incFiles}</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

28

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ${CC} -c ${CFLAGS} -Dscore_type=\'D\' $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

29

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ${CC} ${CPPFLAGS} -c ${CFLAGS} -Dscore_type=\'D\' $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

30

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> </span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

31

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> %_32.o: %.c version.mak ${incFiles}</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

32

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ${CC} -c ${CFLAGS} ${flagsFor32} $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

33

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ${CC} ${CPPFLAGS} -c ${CFLAGS} ${flagsFor32} $< -o $@</span></span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

18

</td>

<td class="new_line diff-line-num" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

34

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC34" class="line" lang="diff"> </span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

19

</td>

<td class="new_line diff-line-num" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

35

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC35" class="line" lang="diff"> </span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

20

</td>

<td class="new_line diff-line-num" data-linenumber="36" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

36

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC36" class="line" lang="diff"> lastz: $(foreach part,${srcFiles},${part}.o)</span>

</pre>

</td>

</tr>

</table>

<br>

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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">

<a href="https://salsa.debian.org/med-team/lastz/-/compare/e0920a8745831a26441c142d85c830be8d189982...6fa527dd3b0dedb41579461eb41ec832a79e26d9#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

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<td class="old_line diff-line-num" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

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<td class="new_line diff-line-num" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">propagate_cflags.patch</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

2

</td>

<td class="new_line diff-line-num" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

2

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">fix_signed_char.patch</span>

</pre>

</td>

</tr>

<tr class="line_holder" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

</td>

<td class="new_line diff-line-num" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

</td>

<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">spelling.patch</span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="old_line diff-line-num new" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="new_line diff-line-num new" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

</td>

<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">gcc11.patch</span></pre>

</td>

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