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GitLab
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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/python-cogent">Debian Med / python-cogent</a>
</h3>
<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/python-cogent/-/commit/415cdd847ac08b34ac97fa6e5853272203229068">415cdd84</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-11-04T07:57:36+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2021.10.12a1+dfsg</pre>
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<h4>30 changed files:</h4>
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<a href="#6b9c6782d59be7c3d669b9e78328b8c384296d32">
.github/workflows/testing_develop.yml
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<a href="#39764dc6adbe1c6e740db8636ab21a5f44f41f59">
.hgignore
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<a href="#fc1a47a75cc8dc593b20b5e840173df634b008a1">
.hgtags
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<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
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ChangeLog
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<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
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MANIFEST.in
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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<a href="#4c23f3e77a0ef00cf8da63e8e50eef5197724f75">
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changelog.md
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<a href="#49e859ea9237ec65294eb4d7ca4a4f18274e0193">
doc/app/app-overview.rst
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<a href="#6b8723e73a35afa020ee1876c4b7606c027c0a9e">
doc/app/dstore.rst
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<a href="#83fa65f90eb0ca39546387de70a2ad1e5177dfcf">
doc/app/user_function.rst
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<a href="#df0576cbb783bc50b36e1efa3cbe0564a26c8295">
doc/conf.py
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<a href="#26098ebae9e9374d80a5ace6f6dde2a97af9a95f">
doc/cookbook/loading_tabular.rst
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<a href="#40c534144d6418cfd0d19fbbca6f0fab33adb3f3">
doc/cookbook/tables.rst
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<a href="#554e68c37dd14ba4c37f8f36d8565cdf4759a3ef">
doc/doctest_rsts.py
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<a href="#8946fc52d6783b7536ec95b67e8da46f4e07e0a6">
doc/examples/demo-mpi-parallel.py
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<a href="#5d07e7d72637aa0d59c89d381fe6dc4cf46e2491">
pyproject.toml
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<a href="#19359a61ae2446b51b549167b014da2fcf265768">
requirements.txt
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<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
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setup.py
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<a href="#080302dec7e3147b79d987dfec5d19c02228a1b7">
src/cogent3/__init__.py
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<a href="#8d931bbb6bbf295fb5d9274a290516ff599b1c99">
src/cogent3/align/__init__.py
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<a href="#d04312f49b684dc5774aa8fbbaab1afc119583b0">
src/cogent3/align/align.py
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<a href="#959bab7469aa4524730c5a1d561de8bb52e8eaf5">
src/cogent3/align/compare_numba.py
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<a href="#573642c86d515c6d01065bdefb98bc700a576900">
src/cogent3/align/dp_calculation.py
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<a href="#66c0cddca2670b31fa0c9e66ee3997fd781e7e94">
src/cogent3/align/indel_model.py
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<a href="#487d94ac831b125befda7468430757b217a3e23f">
src/cogent3/align/indel_positions.py
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<a href="#df8101e7e91e9c2cb04f52a836717f1662134cdd">
src/cogent3/align/pairwise.py
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<a href="#655beda0be4ef4308e277932a279af57c3e8b798">
src/cogent3/align/pairwise_pogs_numba.py
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<li class="file-stats">
<a href="#e780510cc7e53fc09fcf39506977d4959f1a468d">
src/cogent3/align/pairwise_seqs_numba.py
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<li class="file-stats">
<a href="#688ae986f425ccd2199f057daf42c33ad399b528">
src/cogent3/align/progressive.py
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<h5>The diff was not included because it is too large.</h5>
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