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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
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<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9f7c8708a9db023ca168e9f11daa25c7d34cd2ed">9f7c8708</a></strong>
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<span>by Andreas Tille</span>
<i>at 2021-11-30T13:42:23+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9f7c8708a9db023ca168e9f11daa25c7d34cd2ed#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 30 Nov 2021 <span class="idiff left">0</span>1:42:0<span class="idiff right">5</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Tue, 30 Nov 2021 1<span class="idiff left">3</span>:42:0<span class="idiff right">4</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 18<span class="idiff left right">0</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 18<span class="idiff left right">2</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> orthanc | 99 | {covid-19,imaging,practice} | </span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> orthanc-wsi | 55 | {imaging,oncology,his,practice,laboratory,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> amide | 3<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> amide | 3<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> htsjdk | 34 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> dcm2niix | 25 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> gdcm | 25 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> dicomscope | 24 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> openslide | 22 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> dicom3tools | 21 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> dicomscope | 27 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dcm2niix | 24 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> gdcm | 24 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicom3tools | 23 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> openslide | 20 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> gdcm | 16 | {covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> gnumed-server | 16 | {practice,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> odin | 16 | {imaging,imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> gdcm | 15 | {covid-19,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> ngs-sdk | 15 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> minc-tools | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> mrtrix3 | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> invesalius | 13 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> orthanc-webviewer | 13 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> dicomnifti | 1<span class="idiff left right">2</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> dicomnifti | 1<span class="idiff left right">1</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> insighttoolkit4 | 11 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> gdcm | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> nifticlib | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> <span class="idiff left">gdcm </span> | 9 | {<span class="idiff right">imaging-dev}</span> | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> <span class="idiff left">adun.app</span> | 9 | {<span class="idiff right">bio} </span> | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> king | 9 | {typesetting,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> pixelmed | 9 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> adun.app | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> biojava-live | 8 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> libminc | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> mia | 8 | {imaging} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -40,7 +40,6 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> jebl2 | 5 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> ngs-sdk | 5 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> nifti2dicom | 5 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> oscar | 5 | {data,tools,practice} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> rambo-k | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> getdata | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> libdivsufsort | 4 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -50,6 +49,7 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> nipype | 4 | {imaging,imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> orthanc-mysql | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> orthanc-postgresql | 4 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> oscar | 4 | {data,tools,practice} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> pymia | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> runcircos-gui | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> salmon | 4 | {covid-19,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -76,7 +76,6 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> lamarc | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"> libbio-mage-utils-perl | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> obitools | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC79" class="line" lang="plaintext"> opencfu | 2 | {laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> orthanc-gdcm | 2 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> piler | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> proalign | 2 | {bio,bio-phylogeny} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -101,8 +100,8 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> dicompyler | 1 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> fastml | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> fsm-lite | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> gatb-core | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> gatb-core | 1 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext"> gatb-core | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> gifticlib | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> hinge | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> libbpp-core | 1 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -131,6 +130,7 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> mhap | 1 | {bio-ngs,bio} | </span>
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132
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131
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> microbegps | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> ncbi-vdb | 1 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext"> opencfu | 1 | {laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> orthanc-python | 1 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> pbseqlib | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> pigx-rnaseq | 1 | {covid-19,bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -208,5 +208,5 @@ Last-Update: Tue, 30 Nov 2021 01:42:05 +0000</td>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> xdffileio | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="plaintext"> mssstest | -1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> tipp | -1 | {covid-19,bio} | </span>
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext">(23<span class="idiff left right">8</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext">(23<span class="idiff left right">7</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="plaintext"></span></pre>
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