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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/q2-composition">Debian Med / q2-composition</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-composition/-/commit/481adc6c61a2f4dfde43fb27629649b81eca38e8">481adc6c</a></strong>
<div>
<span>by Steffen</span>
<i>at 2021-12-04T22:22:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Completed copyright - prior to upload!
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-composition/-/commit/e9595cbb510a94d486d1ef4206927053116c0faf">e9595cbb</a></strong>
<div>
<span>by Steffen</span>
<i>at 2021-12-04T22:23:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2021.8.0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-composition/-/commit/350badf547e2ca0383bfd490f616a6e9bffb5c41">350badf5</a></strong>
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<span>by Steffen</span>
<i>at 2021-12-04T22:23:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2021.8.0'
Update to upstream version '2021.8.0'
with Debian dir 7c6a4b3797fc9c7a62d12fbc5125bd8233446339</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/q2-composition/-/commit/4be7cf49d390e9363ef4d442b82a9f3055339ca2">4be7cf49</a></strong>
<div>
<span>by Steffen</span>
<i>at 2021-12-04T22:32:46+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Need a solution for vega as for q2-longitudinal
</pre>
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<h4>19 changed files:</h4>
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.github/workflows/ci.yml
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.travis.yml
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<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
LICENSE
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<a href="#243f1ef343e8375e9296d24d5fc49b37a3869bcc">
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ci/recipe/conda_build_config.yaml
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<li class="file-stats">
<a href="#22fbe0b68848772d4b1c45f0d62dcd71a06cde00">
ci/recipe/meta.yaml
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<li class="file-stats">
<a href="#7501cbfefc540bb61e006b177d29011c6d15b501">
q2_composition/__init__.py
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<li class="file-stats">
<a href="#597441305313472826bc615c9048dcdf63384936">
q2_composition/_ancom.py
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<a href="#4746cc755d00a1fcb273ce7bf198440e37d14329">
q2_composition/_impute.py
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<li class="file-stats">
<a href="#51692cf2db49b5f52f27631c8b9fa7666a330f44">
q2_composition/_version.py
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<li class="file-stats">
<a href="#1fb7dcef6df99abdbdba45687c4855ac78210a1d">
q2_composition/plugin_setup.py
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<li class="file-stats">
<a href="#8a9851b1a3c5af1cc00eab4138fd269fb03e1e66">
q2_composition/tests/__init__.py
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<a href="#d617ed475af6c3b6db38728c95c7fec7fb688d59">
q2_composition/tests/test_ancom.py
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<a href="#cd4a08c40c19ad6a357c54f14b3c2f48d06f4bb6">
q2_composition/tests/test_impute.py
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<li class="file-stats">
<a href="#3c021d5ece92246751f96409eb08e5497e02a72e">
q2_composition/tests/test_plugin_setup.py
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<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<h4>Changes:</h4>
<li id="899ce9c202bf7bb5480e72836c3edc773c9c4244">
<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#899ce9c202bf7bb5480e72836c3edc773c9c4244"><strong>.github/workflows/ci.yml</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="yaml"><span class="c1" style="color: #998; font-style: italic;"># This file is automatically generated by busywork.qiime2.org and</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="yaml"><span class="c1" style="color: #998; font-style: italic;"># template-repos - any manual edits made to this file will be erased when</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="yaml"><span class="c1" style="color: #998; font-style: italic;"># busywork performs maintenance updates.</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="yaml"><span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">ci</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="yaml"> <span class="na" style="color: #008080;">pull_request</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="yaml"> <span class="na" style="color: #008080;">branches</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">master</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="yaml"><span class="na" style="color: #008080;">jobs</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="yaml"> <span class="na" style="color: #008080;">lint</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="yaml"> <span class="na" style="color: #008080;">runs-on</span><span class="pi">:</span> <span class="s" style="color: #d14;">ubuntu-latest</span></span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="yaml"> <span class="na" style="color: #008080;">steps</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">checkout source</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="yaml"> <span class="na" style="color: #008080;">uses</span><span class="pi">:</span> <span class="s" style="color: #d14;">actions/checkout@v2</span></span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">set up python </span><span class="m" style="color: #099;">3.8</span></span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="yaml"> <span class="na" style="color: #008080;">uses</span><span class="pi">:</span> <span class="s" style="color: #d14;">actions/setup-python@v1</span></span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="yaml"> <span class="na" style="color: #008080;">with</span><span class="pi">:</span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="yaml"> <span class="na" style="color: #008080;">python-version</span><span class="pi">:</span> <span class="m" style="color: #099;">3.8</span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="yaml"></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">install dependencies</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="yaml"> <span class="na" style="color: #008080;">run</span><span class="pi">:</span> <span class="s" style="color: #d14;">python -m pip install --upgrade pip</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="yaml"></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">lint</span></span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="yaml"> <span class="na" style="color: #008080;">run</span><span class="pi">:</span> <span class="pi">|</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="yaml"> <span class="s" style="color: #d14;">pip install -q https://github.com/qiime2/q2lint/archive/master.zip</span></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="yaml"> <span class="s" style="color: #d14;">q2lint</span></span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="yaml"> <span class="s" style="color: #d14;">pip install -q flake8</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="yaml"> <span class="s" style="color: #d14;">flake8</span></span>
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34
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="yaml"></span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="yaml"> <span class="na" style="color: #008080;">build-and-test</span><span class="pi">:</span></span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="yaml"> <span class="na" style="color: #008080;">needs</span><span class="pi">:</span> <span class="s" style="color: #d14;">lint</span></span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="yaml"> <span class="na" style="color: #008080;">strategy</span><span class="pi">:</span></span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="yaml"> <span class="na" style="color: #008080;">matrix</span><span class="pi">:</span></span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="yaml"> <span class="na" style="color: #008080;">os</span><span class="pi">:</span> <span class="pi">[</span><span class="nv" style="color: #008080;">ubuntu-latest</span><span class="pi">,</span> <span class="nv" style="color: #008080;">macos-latest</span><span class="pi">]</span></span>
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40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="yaml"> <span class="na" style="color: #008080;">runs-on</span><span class="pi">:</span> <span class="s" style="color: #d14;">${{ matrix.os }}</span></span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="yaml"> <span class="na" style="color: #008080;">steps</span><span class="pi">:</span></span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">checkout source</span></span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="yaml"> <span class="na" style="color: #008080;">uses</span><span class="pi">:</span> <span class="s" style="color: #d14;">actions/checkout@v2</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="yaml"> <span class="na" style="color: #008080;">with</span><span class="pi">:</span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="yaml"> <span class="na" style="color: #008080;">fetch-depth</span><span class="pi">:</span> <span class="m" style="color: #099;">0</span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">set up git repo for versioneer</span></span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="yaml"> <span class="na" style="color: #008080;">run</span><span class="pi">:</span> <span class="s" style="color: #d14;">git fetch --depth=1 origin +refs/tags/*:refs/tags/*</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="yaml"></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="yaml"> <span class="pi">-</span> <span class="na" style="color: #008080;">uses</span><span class="pi">:</span> <span class="s" style="color: #d14;">qiime2/action-library-packaging@alpha1</span></span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="yaml"> <span class="na" style="color: #008080;">with</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="yaml"> <span class="na" style="color: #008080;">package-name</span><span class="pi">:</span> <span class="s" style="color: #d14;">q2-composition</span></span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="yaml"> <span class="na" style="color: #008080;">build-target</span><span class="pi">:</span> <span class="s" style="color: #d14;">dev</span></span>
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54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="yaml"> <span class="na" style="color: #008080;">additional-tests</span><span class="pi">:</span> <span class="s" style="color: #d14;">py.test --pyargs q2_composition</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="yaml"> <span class="na" style="color: #008080;">library-token</span><span class="pi">:</span> <span class="s" style="color: #d14;">${{ secrets.LIBRARY_TOKEN }}</span></span></pre>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#dea01dd89a3b602828e630677fde5d77c06441c8"><strong>.travis.yml</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="yaml"><span class="na" style="color: #008080;">dist</span><span class="pi">:</span> <span class="s" style="color: #d14;">trusty</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="yaml"><span class="na" style="color: #008080;">sudo</span><span class="pi">:</span> <span class="no" style="color: #008080;">false</span></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="yaml"><span class="na" style="color: #008080;">language</span><span class="pi">:</span> <span class="s" style="color: #d14;">python</span></span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="yaml"><span class="na" style="color: #008080;">before_install</span><span class="pi">:</span></span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">export MPLBACKEND='Agg'</span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">wget -q https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh</span></span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">export MINICONDA_PREFIX="$HOME/miniconda"</span></span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">bash miniconda.sh -b -p $MINICONDA_PREFIX</span></span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">export PATH="$MINICONDA_PREFIX/bin:$PATH"</span></span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda config --set always_yes yes</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda update -q conda</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda info -a</span></span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="yaml"><span class="na" style="color: #008080;">install</span><span class="pi">:</span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">wget -q https://raw.githubusercontent.com/qiime2/environment-files/master/latest/staging/qiime2-latest-py36-linux-conda.yml</span></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda env create -q -n test-env --file qiime2-latest-py36-linux-conda.yml</span></span>
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16
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">source activate test-env</span></span>
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17
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">conda install -q pytest-cov</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">pip install -q flake8 coveralls</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">pip install -q https://github.com/qiime2/q2lint/archive/master.zip</span></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">make install</span></span>
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21
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="yaml"><span class="na" style="color: #008080;">script</span><span class="pi">:</span></span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">make lint</span></span>
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23
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">make test-cov</span></span>
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24
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="yaml"><span class="na" style="color: #008080;">after_success</span><span class="pi">:</span></span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">coveralls</span></span>
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26
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="yaml"><span class="na" style="color: #008080;">notifications</span><span class="pi">:</span></span>
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27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="yaml"> <span class="na" style="color: #008080;">webhooks</span><span class="pi">:</span></span>
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28
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="yaml"> <span class="na" style="color: #008080;">on_success</span><span class="pi">:</span> <span class="s" style="color: #d14;">change</span></span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="yaml"> <span class="na" style="color: #008080;">on_failure</span><span class="pi">:</span> <span class="s" style="color: #d14;">always</span></span></pre>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">BSD 3-Clause License</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext">Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="markdown"><span class="gh" style="color: #800080; font-weight: 600;"># q2<span class="idiff left right">_</span>composition</span></span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="markdown"><span class="gh" style="color: #800080; font-weight: 600;"># q2<span class="idiff left right">-</span>composition</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="markdown"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="markdown"><span class="p">[</span><span class="nv" style="color: #008080;">![Build Status</span><span class="p">](</span><span class="sx" style="color: #d14;">https://travis-ci.org/qiime2/q2-composition.svg?branch=master</span><span class="p">)</span>](https://travis-ci.org/qiime2/q2-composition)</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="markdown"><span class="p">[</span><span class="nv" style="color: #008080;">![Coverage Status</span><span class="p">](</span><span class="sx" style="color: #d14;">https://coveralls.io/repos/github/qiime2/q2-composition/badge.svg?branch=master</span><span class="p">)</span>](https://coveralls.io/github/qiime2/q2-composition?branch=master)</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="markdown"><span class="p">![](</span><span class="sx" style="color: #d14;">https://github.com/qiime2/q2-composition/workflows/ci/badge.svg</span><span class="p">)</span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="markdown">This is a QIIME 2 plugin. For details on QIIME 2, see https://qiime2.org.</span></pre>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="markdown">This is a QIIME 2 plugin. For details on QIIME 2, see https://qiime2.org.</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#243f1ef343e8375e9296d24d5fc49b37a3869bcc"><strong>ci/recipe/conda_build_config.yaml</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="yaml"><span class="na" style="color: #008080;">python</span><span class="pi">:</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="yaml"> <span class="pi">-</span> <span class="m" style="color: #099;">3.6</span></span></pre>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#22fbe0b68848772d4b1c45f0d62dcd71a06cde00"><strong>ci/recipe/meta.yaml</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="yaml"><span class="pi">{</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">%</span> <span class="nv" style="color: #008080;">set data = load_setup_py_data() %</span><span class="pi">}</span></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="yaml"><span class="pi">{</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">%</span> <span class="nv" style="color: #008080;">set version = data.get('version') or 'placehold' %</span><span class="pi">}</span></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="yaml"><span class="pi">{</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">%</span> <span class="nv" style="color: #008080;">set release = '.'.join(version.split('.')</span><span class="pi">[:</span><span class="nv" style="color: #008080;">2</span><span class="pi">]</span><span class="nv" style="color: #008080;">) %</span><span class="pi">}</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="yaml"></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="yaml"><span class="na" style="color: #008080;">package</span><span class="pi">:</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="yaml"> <span class="na" style="color: #008080;">name</span><span class="pi">:</span> <span class="s" style="color: #d14;">q2-composition</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -22,12 +21,18 @@ requirements:</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">scikit-bio</span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">biom-format >=2.1.5,<2.2.0</span></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">scipy</span></span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">pandas >=<span class="idiff left right">0.23.0</span></span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">qiime2 {{ <span class="idiff left right">release</span> }}.*</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2templates {{ <span class="idiff left right">release</span> }}.*</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2-types {{ <span class="idiff left right">release</span> }}.*</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">pandas >=<span class="idiff left right">1</span></span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">qiime2 {{ <span class="idiff left right">qiime2_epoch</span> }}.*</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2templates {{ <span class="idiff left right">qiime2_epoch</span> }}.*</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2-types {{ <span class="idiff left right">qiime2_epoch</span> }}.*</span></span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="yaml"></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="yaml"><span class="na" style="color: #008080;">test</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="yaml"> <span class="na" style="color: #008080;">requires</span><span class="pi">:</span></span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">qiime2 >={{ qiime2 }}</span></span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2templates >={{ q2templates }}</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2-types >={{ q2_types }}</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">pytest</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="yaml"></span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="yaml"> <span class="na" style="color: #008080;">imports</span><span class="pi">:</span></span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">q2_composition</span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="yaml"> <span class="pi">-</span> <span class="s" style="color: #d14;">qiime2.plugins.composition</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">q2-composition (202<span class="idiff left right">0.11.1</span>-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">q2-composition (202<span class="idiff left right">1.8.0</span>-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Initial release (Closes: #991992).</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> * TODO:</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> $ lintian q2-composition_2020.11.1-1_amd64.changes</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> E: q2-composition source: source-is-missing q2_composition/assets/ancom/js/vega-embed.min.js</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> E: q2-composition source: source-is-missing q2_composition/assets/ancom/js/vega.min.js</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Sat, 04 Dec 2021 22:24:14 +0100</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext">q2-composition (2020.11.1-1) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> * Initial packaging.</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Sat, 07 Aug 2021 18:09:31 +0200</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,9 @@ Build-Depends: debhelper-compat (= 13),</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">setuptools</span><span class="p">,</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">nose</span> <span class="p"><</span><span class="c1" style="color: #998; font-style: italic;">!nocheck>,</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="mosel"> <span class="n" style="color: #333;">qiime</span> <span class="p">(>=</span> <span class="m" style="color: #099;">2019.10.0</span><span class="p">)</span> <span class="p"><</span><span class="c1" style="color: #998; font-style: italic;">!nocheck>,</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="mosel"><span class="n" style="color: #333;">Standards</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">4.5.1</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pytest</span> <span class="p"><</span><span class="c1" style="color: #998; font-style: italic;">!nocheck>,</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="mosel"> <span class="n" style="color: #333;">python3</span><span class="p">-</span><span class="n" style="color: #333;">pytest</span><span class="p">-</span><span class="n" style="color: #333;">cov</span> <span class="p"><</span><span class="c1" style="color: #998; font-style: italic;">!nocheck></span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="mosel"><span class="n" style="color: #333;">Standards</span><span class="p">-</span><span class="k" style="font-weight: 600;">Version</span><span class="p">:</span> <span class="m" style="color: #099;">4.6.0</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Browser</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">salsa</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">med</span><span class="p">-</span><span class="n" style="color: #333;">team</span><span class="p">/</span><span class="n" style="color: #333;">q2</span><span class="p">-</span><span class="n" style="color: #333;">composition</span></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="mosel"><span class="n" style="color: #333;">Vcs</span><span class="p">-</span><span class="n" style="color: #333;">Git</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">salsa</span><span class="p">.</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span><span class="n" style="color: #333;">med</span><span class="p">-</span><span class="n" style="color: #333;">team</span><span class="p">/</span><span class="n" style="color: #333;">q2</span><span class="p">-</span><span class="n" style="color: #333;">composition</span><span class="p">.</span><span class="n" style="color: #333;">git</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="mosel"><span class="n" style="color: #333;">Homepage</span><span class="p">:</span> <span class="n" style="color: #333;">https</span><span class="p">://</span><span class="n" style="color: #333;">qiime2</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">/</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,6 +6,14 @@ Files: *</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Copyright: 2016-2019 QIIME 2 development team</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">License: BSD-3-clause</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">Files: q2_composition/assets/ancom</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">Copyright: 2015, University of Washington Interactive Data Lab</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">License: BSD-3-clause</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext">Files: versioneer.py q2_composition/_version.py</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext">Copyright: Brian Warner</span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext">License: CC0-1.0</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Files: debian/*</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Copyright: 2019 Liubov Chuprikova <chuprikovalv@gmail.com></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> Andreas Tille <tille@debian.org>,</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -57,3 +65,124 @@ License: GPL-2+</td>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> On a Debian system, the GNU GPL license version 2 is distributed in the</span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> file /usr/share/common-licenses/GPL-2.</span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="plaintext">License: CC0-1.0</span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext"> From https://creativecommons.org/publicdomain/zero/1.0/</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="plaintext"> .</span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext"> CREATIVE COMMONS CORPORATION IS NOT A LAW FIRM AND DOES NOT PROVIDE</span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="plaintext"> LEGAL SERVICES. DISTRIBUTION OF THIS DOCUMENT DOES NOT CREATE AN</span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> ATTORNEY-CLIENT RELATIONSHIP. CREATIVE COMMONS PROVIDES THIS INFORMATION</span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> ON AN "AS-IS" BASIS. CREATIVE COMMONS MAKES NO WARRANTIES REGARDING THE</span>
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76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext"> USE OF THIS DOCUMENT OR THE INFORMATION OR WORKS PROVIDED HEREUNDER,</span>
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77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> AND DISCLAIMS LIABILITY FOR DAMAGES RESULTING FROM THE USE OF THIS</span>
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78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> DOCUMENT OR THE INFORMATION OR WORKS PROVIDED HEREUNDER.</span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="plaintext"> .</span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> Statement of Purpose</span>
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81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="plaintext"> .</span>
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82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="plaintext"> The laws of most jurisdictions throughout the world automatically confer</span>
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83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> exclusive Copyright and Related Rights (defined below) upon the creator</span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="plaintext"> and subsequent owner(s) (each and all, an "owner") of an original work</span>
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85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="plaintext"> of authorship and/or a database (each, a "Work").</span>
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86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="plaintext"> .</span>
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87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext"> Certain owners wish to permanently relinquish those rights to a Work</span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="plaintext"> for the purpose of contributing to a commons of creative, cultural and</span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext"> scientific works ("Commons") that the public can reliably and without</span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="plaintext"> fear of later claims of infringement build upon, modify, incorporate in</span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> other works, reuse and redistribute as freely as possible in any form</span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="plaintext"> whatsoever and for any purposes, including without limitation commercial</span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="plaintext"> purposes. These owners may contribute to the Commons to promote the ideal</span>
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<td class="new_line diff-line-num new" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="plaintext"> of a free culture and the further production of creative, cultural and</span>
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<td class="new_line diff-line-num new" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext"> scientific works, or to gain reputation or greater distribution for</span>
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<td class="new_line diff-line-num new" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="plaintext"> their Work in part through the use and efforts of others.</span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="plaintext"> .</span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext"> For these and/or other purposes and motivations, and without any</span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="plaintext"> expectation of additional consideration or compensation, the person</span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="plaintext"> associating CC0 with a Work (the "Affirmer"), to the extent that</span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="plaintext"> he or she is an owner of Copyright and Related Rights in the Work,</span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext"> voluntarily elects to apply CC0 to the Work and publicly distribute</span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="plaintext"> the Work under its terms, with knowledge of his or her Copyright and</span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="plaintext"> Related Rights in the Work and the meaning and intended legal effect</span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="plaintext"> of CC0 on those rights.</span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="plaintext"> .</span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="plaintext"> 1. Copyright and Related Rights. A Work made available under CC0</span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext"> may be protected by copyright and related or neighboring rights</span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="plaintext"> ("Copyright and Related Rights"). Copyright and Related Rights</span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="plaintext"> include, but are not limited to, the following:</span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="plaintext"> .</span>
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112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="plaintext"> i the right to reproduce, adapt, distribute, perform, display,</span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext"> communicate, and translate a Work;</span>
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<td class="new_line diff-line-num new" data-linenumber="114" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="plaintext"> ii moral rights retained by the original author(s) and/or performer(s);</span>
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<td class="new_line diff-line-num new" data-linenumber="115" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext"> iii publicity and privacy rights pertaining to a person's image or</span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext"> likeness depicted in a Work;</span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="plaintext"> iv rights protecting against unfair competition in regards to a Work,</span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="plaintext"> subject to the limitations in paragraph 4(a), below;</span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext"> v rights protecting the extraction, dissemination, use and reuse of data in a Work;</span>
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120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="plaintext"> vi database rights (such as those arising under Directive 96/9/EC of the</span>
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<td class="new_line diff-line-num new" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="plaintext"> European Parliament and of the Council of 11 March 1996 on the legal</span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="plaintext"> protection of databases, and under any national implementation thereof,</span>
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="plaintext"> including any amended or successor version of such directive); and</span>
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="plaintext"> vii other similar, equivalent or corresponding rights throughout the world</span>
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext"> based on applicable law or treaty, and any national implementations</span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="plaintext"> thereof.</span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="plaintext"> 2. Waiver. To the greatest extent permitted by, but not in</span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="plaintext"> contravention of, applicable law, Affirmer hereby overtly, fully,</span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="plaintext"> permanently, irrevocably and unconditionally waives, abandons,</span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="plaintext"> and surrenders all of Affirmer's Copyright and Related Rights and</span>
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="plaintext"> associated claims and causes of action, whether now known or unknown</span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext"> (including existing as well as future claims and causes of action),</span>
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext"> in the Work (i) in all territories worldwide, (ii) for the maximum</span>
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext"> duration provided by applicable law or treaty (including future time</span>
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="plaintext"> extensions), (iii) in any current or future medium and for any number</span>
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext"> of copies, and (iv) for any purpose whatsoever, including without</span>
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="plaintext"> limitation commercial, advertising or promotional purposes (the</span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="plaintext"> "Waiver"). Affirmer makes the Waiver for the benefit of each member</span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="plaintext"> of the public at large and to the detriment of Affirmer's heirs and</span>
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="plaintext"> successors, fully intending that such Waiver shall not be subject to</span>
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="plaintext"> revocation, rescission, cancellation, termination, or any other legal</span>
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext"> or equitable action to disrupt the quiet enjoyment of the Work by</span>
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144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="plaintext"> the public as contemplated by Affirmer's express Statement of Purpose.</span>
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145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"> .</span>
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="plaintext"> 3. Public License Fallback. Should any part of the Waiver for any</span>
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="plaintext"> reason be judged legally invalid or ineffective under applicable law,</span>
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext"> then the Waiver shall be preserved to the maximum extent permitted</span>
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149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="plaintext"> taking into account Affirmer's express Statement of Purpose. In</span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="plaintext"> addition, to the extent the Waiver is so judged Affirmer hereby</span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="plaintext"> grants to each affected person a royalty-free, non transferable, non</span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="plaintext"> sublicensable, non exclusive, irrevocable and unconditional license</span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="plaintext"> to exercise Affirmer's Copyright and Related Rights in the Work (i)</span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext"> in all territories worldwide, (ii) for the maximum duration provided</span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="plaintext"> by applicable law or treaty (including future time extensions), (iii)</span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="plaintext"> in any current or future medium and for any number of copies, and (iv)</span>
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157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="plaintext"> for any purpose whatsoever, including without limitation commercial,</span>
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158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="plaintext"> advertising or promotional purposes (the "License"). The License</span>
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159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="plaintext"> shall be deemed effective as of the date CC0 was applied by Affirmer</span>
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160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="plaintext"> to the Work. Should any part of the License for any reason be judged</span>
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161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="plaintext"> legally invalid or ineffective under applicable law, such partial</span>
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162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext"> invalidity or ineffectiveness shall not invalidate the remainder</span>
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163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="plaintext"> of the License, and in such case Affirmer hereby affirms that he or</span>
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164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="plaintext"> she will not (i) exercise any of his or her remaining Copyright and</span>
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165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="plaintext"> Related Rights in the Work or (ii) assert any associated claims and</span>
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166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="plaintext"> causes of action with respect to the Work, in either case contrary</span>
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167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="plaintext"> to Affirmer's express Statement of Purpose.</span>
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168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="plaintext"> .</span>
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169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="plaintext"> 4. Limitations and Disclaimers.</span>
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170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="plaintext"> .</span>
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<td class="new_line diff-line-num new" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="plaintext"> No trademark or patent rights held by Affirmer are waived, abandoned,</span>
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<td class="new_line diff-line-num new" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="plaintext"> surrendered, licensed or otherwise affected by this document.</span>
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<td class="new_line diff-line-num new" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="plaintext"> Affirmer offers the Work as-is and makes no representations or</span>
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174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext"> warranties of any kind concerning the Work, express, implied,</span>
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175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext"> statutory or otherwise, including without limitation warranties</span>
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176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="plaintext"> of title, merchantability, fitness for a particular purpose, non</span>
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="plaintext"> infringement, or the absence of latent or other defects, accuracy,</span>
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178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="plaintext"> or the present or absence of errors, whether or not discoverable,</span>
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179
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<pre style="margin: 0;">+<span id="LC179" class="line" lang="plaintext"> all to the greatest extent permissible under applicable law.</span>
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180
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<pre style="margin: 0;">+<span id="LC180" class="line" lang="plaintext"> Affirmer disclaims responsibility for clearing rights of other</span>
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181
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<pre style="margin: 0;">+<span id="LC181" class="line" lang="plaintext"> persons that may apply to the Work or any use thereof, including</span>
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182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="plaintext"> without limitation any person's Copyright and Related Rights in the</span>
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183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="plaintext"> Work. Further, Affirmer disclaims responsibility for obtaining any</span>
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184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="plaintext"> necessary consents, permissions or other rights required for any</span>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="plaintext"> use of the Work.</span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="plaintext"> Affirmer understands and acknowledges that Creative Commons is not</span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="plaintext"> a party to this document and has no duty or obligation with respect</span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext"> to this CC0 or use of the Work.</span></pre>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#7501cbfefc540bb61e006b177d29011c6d15b501"><strong>q2_composition/__init__.py</strong></a>
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1
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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3
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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4
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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5
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#597441305313472826bc615c9048dcdf63384936"><strong>q2_composition/_ancom.py</strong></a>
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1
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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2
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#4746cc755d00a1fcb273ce7bf198440e37d14329"><strong>q2_composition/_impute.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#51692cf2db49b5f52f27631c8b9fa7666a330f44"><strong>q2_composition/_version.py</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -23,9 +23,9 @@ def get_keywords():</td>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># setup.py/versioneer.py will grep for the variable names, so they must</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># each be defined on a line of their own. _version.py will just call</span></span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python"> <span class="c1" style="color: #998; font-style: italic;"># get_keywords().</span></span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (tag: 202<span class="idiff left right">0.11.1</span>)"</span></span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">git_full</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"<span class="idiff left right">3c99b8b2e2d94a7be6e4ce85e2f9b7f48c493202</span>"</span></span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="python"> <span class="n" style="color: #333;">git_date</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"202<span class="idiff left right">0-12-05 20:44:48</span> +0000"</span></span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="python"> <span class="n" style="color: #333;">git_refnames</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">" (tag: 202<span class="idiff left right">1.8.0</span>)"</span></span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="python"> <span class="n" style="color: #333;">git_full</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"<span class="idiff left right">af8070faa7ec68d9527f19f504d258e4be9e4830</span>"</span></span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="python"> <span class="n" style="color: #333;">git_date</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">"202<span class="idiff left right">1-09-09 18:35:29</span> +0000"</span></span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="python"> <span class="n" style="color: #333;">keywords</span> <span class="o" style="font-weight: 600;">=</span> <span class="p">{</span><span class="s" style="color: #d14;">"refnames"</span><span class="p">:</span> <span class="n" style="color: #333;">git_refnames</span><span class="p">,</span> <span class="s" style="color: #d14;">"full"</span><span class="p">:</span> <span class="n" style="color: #333;">git_full</span><span class="p">,</span> <span class="s" style="color: #d14;">"date"</span><span class="p">:</span> <span class="n" style="color: #333;">git_date</span><span class="p">}</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python"> <span class="k" style="font-weight: 600;">return</span> <span class="n" style="color: #333;">keywords</span></span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python"></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#1fb7dcef6df99abdbdba45687c4855ac78210a1d"><strong>q2_composition/plugin_setup.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#8a9851b1a3c5af1cc00eab4138fd269fb03e1e66"><strong>q2_composition/tests/__init__.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#d617ed475af6c3b6db38728c95c7fec7fb688d59"><strong>q2_composition/tests/test_ancom.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -9,7 +9,7 @@</td>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">unittest</span></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">os</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas.<span class="idiff left right">util.</span>testing</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pdt</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas.testing</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pdt</span></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">numpy</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">np</span></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">pandas</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">pd</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#cd4a08c40c19ad6a357c54f14b3c2f48d06f4bb6"><strong>q2_composition/tests/test_impute.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#3c021d5ece92246751f96409eb08e5497e02a72e"><strong>q2_composition/tests/test_plugin_setup.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<a href="https://salsa.debian.org/med-team/q2-composition/-/compare/99d57a26f3a1b72facb3c62db99d8d65dd716955...4be7cf49d390e9363ef4d442b82a9f3055339ca2#8e2edce0d507e1297474f25c00cae94258db38d8"><strong>setup.py</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># ----------------------------------------------------------------------------</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">0</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Copyright (c) 2016-202<span class="idiff left right">1</span>, QIIME 2 development team.</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Distributed under the terms of the Modified BSD License.</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;">#</span></span>
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