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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/htslib">Debian Med / htslib</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/htslib/-/commit/f00cee51ad84bd280400679824c86854be4d6870">f00cee51</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2021-12-07T08:10:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.14+ds</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
</a>
</li>
<li class="file-stats">
<a href="#bdb455f32b320a8835a445259e0c8d9f6a687368">
bcf_sr_sort.c
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</li>
<li class="file-stats">
<a href="#784f84af063299f7e2f0676f161fe91f67f77ab0">
bgzf.c
</a>
</li>
<li class="file-stats">
<a href="#6a0642ef327a4ce0d9e388d0b0cf0a71638ad61b">
bgzip.1
</a>
</li>
<li class="file-stats">
<a href="#5422e2382dc57b288f3056d5cd31f46ca4fd2069">
bgzip.c
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</li>
<li class="file-stats">
<a href="#5c8ade8ae11dfe042170aa961699bbd02f2ec97e">
cram/cram_codecs.c
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</li>
<li class="file-stats">
<a href="#840976018c922d6811354c31daaa780aa6f261bf">
cram/cram_decode.c
</a>
</li>
<li class="file-stats">
<a href="#5f323d0f8e1572d29ce69422114ea3c683c08bd6">
cram/cram_io.c
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<li class="file-stats">
<a href="#7a9c610bb7f05ffd388d1e4472db647f1d385943">
hfile_s3.c
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<li class="file-stats">
<a href="#1be55503d7d6c773586dc644e84b86a5536816d8">
hts.c
</a>
</li>
<li class="file-stats">
<a href="#00ad65eb0bb2ca2c84337bc85e68e67fa3c2f892">
htsfile.1
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<li class="file-stats">
<a href="#d8c6282dc0cb65ac8021905b6ac9d13adb8a1315">
htslib-s3-plugin.7
</a>
</li>
<li class="file-stats">
<a href="#23144171ef46270c8d90b6c189ed5dc6d7b18651">
htslib/hts.h
</a>
</li>
<li class="file-stats">
<a href="#58e427dc2cdb82a50a82f499c9595bf7ba30c9b8">
htslib/hts_defs.h
</a>
</li>
<li class="file-stats">
<a href="#13ba80e67cedc7292fec4fc52d54a883ec2e97ad">
htslib/sam.h
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<li class="file-stats">
<a href="#bd5f0736dc68a30af334053dc255f7607647ac52">
htslib/synced_bcf_reader.h
</a>
</li>
<li class="file-stats">
<a href="#029f45b5a6618d3c762af054ae12f411ce704a81">
htslib/vcf.h
</a>
</li>
<li class="file-stats">
<a href="#3ff76aca17d9815adbbfee02596e6c4d46aa1384">
sam.c
</a>
</li>
<li class="file-stats">
<a href="#8f00f65387751d947ca665d07356f7c24daad174">
synced_bcf_reader.c
</a>
</li>
<li class="file-stats">
<a href="#0d460fca0bf7c4a1ddcd42c3f68e2d829ea204e6">
tabix.1
</a>
</li>
<li class="file-stats">
<a href="#482662eac678c608c72ad8e55e43d66da1980027">
<span class="new-file">
+
test/base_mods/MM-chebi.out
</span>
</a>
</li>
<li class="file-stats">
<a href="#f25637164024badc1aaf9796a8c0222562daca18">
<span class="new-file">
+
test/base_mods/MM-chebi.sam
</span>
</a>
</li>
<li class="file-stats">
<a href="#06ccf1440c8fcf09285f9e400d85d404a565f2b8">
<span class="new-file">
+
test/base_mods/MM-double.out
</span>
</a>
</li>
<li class="file-stats">
<a href="#ad127826a3c6c2ed8d6326dcbb633a8e1a8c08b2">
<span class="new-file">
+
test/base_mods/MM-double.sam
</span>
</a>
</li>
<li class="file-stats">
<a href="#7294e430c989af3192eac1c103006428d4fcf5d2">
<span class="new-file">
+
test/base_mods/MM-multi.out
</span>
</a>
</li>
<li class="file-stats">
<a href="#482066e96c18a87e1bfc60d7d0d2f00348ef012e">
<span class="new-file">
+
test/base_mods/MM-multi.sam
</span>
</a>
</li>
<li class="file-stats">
<a href="#a69a14367751551baa6d1ed1ab9ff875f062ba38">
<span class="new-file">
+
test/base_mods/MM-orient.sam
</span>
</a>
</li>
<li class="file-stats">
<a href="#e25b64e0730a2b46ecf792d7b9dbabbc9908e808">
<span class="new-file">
+
test/base_mods/MM-pileup.out
</span>
</a>
</li>
<li class="file-stats">
<a href="#5b16b1487634a60cbfd9f502a62d65c58b91882a">
<span class="new-file">
+
test/base_mods/MM-pileup.sam
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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