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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/fsm-lite">Debian Med / fsm-lite</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/fsm-lite/-/commit/47fd07a69f37cd65ffaef3ccbc2f5988d6d7e506">47fd07a6</a></strong>
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<span>by Lance Lin</span>
<i>at 2021-12-21T19:54:14+07:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Added checksum based test
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fsm-lite/-/commit/df266dc37d0c3f84bebd4df216cbf40f2f3cf4db">df266dc3</a></strong>
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<span>by Lance Lin</span>
<i>at 2021-12-21T20:12:35+07:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fixed md5sum
</pre>
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<h4>1 changed file:</h4>
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<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
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<h4>Changes:</h4>
<li id="8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
<a href="https://salsa.debian.org/med-team/fsm-lite/-/compare/e959cdd8e6badb857b74238e8023d3f1c307dce2...df266dc37d0c3f84bebd4df216cbf40f2f3cf4db#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -59,10 +59,16 @@ cat <<EOF > input.list</td>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="shell"><span class="sh" style="color: #d14;">testfile </span><span class="k" style="font-weight: 600;">${</span><span class="nv" style="color: #008080;">AUTOPKGTEST_TMP</span><span class="k" style="font-weight: 600;">}</span><span class="sh" style="color: #d14;">/testfile.fasta</span></span>
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<td class="old_line diff-line-num" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="shell"><span class="no" style="color: #008080;">EOF</span></span>
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<td class="old_line diff-line-num" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"run-unit-test: generating md5 sums for verification"</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"001b2030f247b79c4339a3a4d4b3438c tmp.meta"</span> <span class="o" style="font-weight: 600;">>></span> checksums</span>
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<td class="new_line diff-line-num new" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"19f8e2431c735a5f86e60251a80b37f4 tmp.tmp"</span> <span class="o" style="font-weight: 600;">>></span> checksums</span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"run-unit-test: running fsm-lite"</span></span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="shell">fsm-lite <span class="nt" style="color: #000080;">-l</span> input.list <span class="nt" style="color: #000080;">-t</span> tmp | <span class="nb" style="color: #0086b3;">gzip</span> - <span class="o" style="font-weight: 600;">></span> output.txt.gz</span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"run-unit-test: verifying md5 checksums"</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="shell"><span class="nb" style="color: #0086b3;">md5sum</span> <span class="nt" style="color: #000080;">--check</span> checksums</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"run-unit-test: verifying output"</span></span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="shell"></span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="shell"><span class="c" style="color: #998; font-style: italic;"># Output in tmp.meta should contain "1508", the file size/output of tmp.tmp in bytes</span></span>
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