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<h3>
Olivier Sallou pushed to branch master
at <a href="https://salsa.debian.org/med-team/emboss">Debian Med / emboss</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/emboss/-/commit/b6513f67155365345bb22b9b195ee0b140b1d804">b6513f67</a></strong>
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<span>by Olivier Sallou</span>
<i>at 2021-12-23T08:19:57+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove com.sun.net calls Closes #982036
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<h4>4 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#dbacf36b11b3b00204b9c0be3143fcfd595da3f2">
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+
debian/patches/com_sun_net_deprecation.patch
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<li class="file-stats">
<a href="#cd35e07345ef6c8074c144e3c52ca7af12d87260">
debian/patches/no_makejar.patch
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/emboss/-/commit/b6513f67155365345bb22b9b195ee0b140b1d804#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">emboss</span> <span class="p">(</span><span class="m" style="color: #099;">6.6.0</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">10</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">com</span><span class="p">.</span><span class="n" style="color: #333;">sun</span><span class="p">.</span><span class="n" style="color: #333;">net</span><span class="p">.</span><span class="n" style="color: #333;">ssl</span> <span class="n" style="color: #333;">calls</span><span class="p">,</span> <span class="n" style="color: #333;">removed</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">jdk17</span> <span class="p">(</span><span class="n" style="color: #333;">Closes</span><span class="p">:</span> <span class="p">#</span><span class="m" style="color: #099;">982036</span><span class="p">)</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Olivier</span> <span class="n" style="color: #333;">Sallou</span> <span class="p"><</span><span class="n" style="color: #333;">osallou</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Thu</span><span class="p">,</span> <span class="m" style="color: #099;">23</span> <span class="n" style="color: #333;">Dec</span> <span class="m" style="color: #099;">2021</span> <span class="m" style="color: #099;">08</span><span class="p">:</span><span class="m" style="color: #099;">18</span><span class="p">:</span><span class="m" style="color: #099;">17</span> <span class="p">+</span><span class="m" style="color: #099;">0000</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"></span>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC7" class="line" lang="mosel"><span class="n" style="color: #333;">emboss</span> <span class="p">(</span><span class="m" style="color: #099;">6.6.0</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">9</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"> <span class="m" style="color: #099;">7</span><span class="n" style="color: #333;">a121b7</span> <span class="n" style="color: #333;">Remove</span> <span class="n" style="color: #333;">quotes</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">mailcap</span> <span class="n" style="color: #333;">entries</span><span class="p">.</span></span>
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<li id="dbacf36b11b3b00204b9c0be3143fcfd595da3f2">
<a href="https://salsa.debian.org/med-team/emboss/-/commit/b6513f67155365345bb22b9b195ee0b140b1d804#dbacf36b11b3b00204b9c0be3143fcfd595da3f2"><strong>debian/patches/com_sun_net_deprecation.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Subject: remove deprecated calls to com.sun.net</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Description: com.sun should not be called directly</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"> and now have been removed from JDK.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"> Upstream author has been contacted about issue</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">Forwarded: yes</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="p">Last-Update: 2021-12-23</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="p">Author: Olivier Sallou <osallou@debian.org></span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/org/emboss/jemboss/FileManager.java</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/org/emboss/jemboss/FileManager.java</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="p">@@ -42,22 +42,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> if(mysettings.getPublicSoapURL().startsWith("https"))</span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> //SSL settings</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- com.sun.net.ssl.internal.ssl.Provider p =</span></span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new com.sun.net.ssl.internal.ssl.Provider();</span></span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- Security.addProvider(p);</span></span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"> </span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- //have to do it this way to work with JNLP</span></span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- URL.setURLStreamHandlerFactory( new URLStreamHandlerFactory()</span></span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- public URLStreamHandler createURLStreamHandler(final String protocol)</span></span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(protocol != null && protocol.compareTo("https") == 0)</span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return new com.sun.net.ssl.internal.www.protocol.https.Handler();</span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return null;</span></span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- });</span></span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> //location of keystore</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> System.setProperty("javax.net.ssl.trustStore",</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> "resources/client.keystore");</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/org/emboss/jemboss/Jemboss.java</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/org/emboss/jemboss/Jemboss.java</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="p">@@ -113,22 +113,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> //SSL settings</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"> // System.setProperty ("javax.net.debug", "all");</span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- com.sun.net.ssl.internal.ssl.Provider p =</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new com.sun.net.ssl.internal.ssl.Provider();</span></span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- Security.addProvider(p);</span></span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- //have to do it this way to work with JNLP</span></span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- URL.setURLStreamHandlerFactory( new URLStreamHandlerFactory()</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- public URLStreamHandler createURLStreamHandler(final String protocol)</span></span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(protocol != null && protocol.compareTo("https") == 0)</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return new com.sun.net.ssl.internal.www.protocol.https.Handler();</span></span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return null;</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- });</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"> // System.setProperty("java.protocol.handler.pkgs",</span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"> // "com.sun.net.ssl.internal.www.protocol");</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/org/emboss/jemboss/server/TestPrivateServer.java</span></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/org/emboss/jemboss/server/TestPrivateServer.java</span></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"><span class="p">@@ -61,22 +61,6 @@</span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"> //SSL settings</span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"> // System.setProperty ("javax.net.debug", "all");</span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- com.sun.net.ssl.internal.ssl.Provider p =</span></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new com.sun.net.ssl.internal.ssl.Provider();</span></span>
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66
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- Security.addProvider(p);</span></span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-</span></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- //have to do it this way to work with JNLP</span></span>
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69
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- URL.setURLStreamHandlerFactory( new URLStreamHandlerFactory()</span></span>
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70
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- public URLStreamHandler createURLStreamHandler(final String protocol)</span></span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(protocol != null && protocol.compareTo("https") == 0)</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return new com.sun.net.ssl.internal.www.protocol.https.Handler();</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return null;</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- });</span></span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"> //location of keystore</span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"> System.setProperty("javax.net.ssl.trustStore",</span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/org/emboss/jemboss/server/TestPublicServer.java</span></span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/org/emboss/jemboss/server/TestPublicServer.java</span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="p">@@ -56,22 +56,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"> {</span>
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"> //SSL settings</span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"> // System.setProperty ("javax.net.debug", "all");</span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- com.sun.net.ssl.internal.ssl.Provider p =</span></span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- new com.sun.net.ssl.internal.ssl.Provider();</span></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- Security.addProvider(p);</span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- //have to do it this way to work with JNLP</span></span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- URL.setURLStreamHandlerFactory( new URLStreamHandlerFactory()</span></span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- public URLStreamHandler createURLStreamHandler(final String protocol)</span></span>
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(protocol != null && protocol.compareTo("https") == 0)</span></span>
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- {</span></span>
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return new com.sun.net.ssl.internal.www.protocol.https.Handler();</span></span>
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- return null;</span></span>
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- }</span></span>
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- });</span></span>
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"> // System.setProperty("java.protocol.handler.pkgs",</span>
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"> // "com.sun.net.ssl.internal.www.protocol");</span>
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"> </span></pre>
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<a href="https://salsa.debian.org/med-team/emboss/-/commit/b6513f67155365345bb22b9b195ee0b140b1d804#cd35e07345ef6c8074c144e3c52ca7af12d87260"><strong>debian/patches/no_makejar.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -33,8 +33,8 @@ TIM</td>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="diff"> jakarta-regexp-1.2.jar \</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="diff"> mail.jar \</span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="diff"> jalviewApplet.jar \</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/runJemboss.sh</span></span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/runJemboss.sh</span></span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/jemboss/runJemboss.sh<span class="idiff left right">.in</span></span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/jemboss/runJemboss.sh<span class="idiff left right">.in</span></span></span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="diff"><span class="p">@@ -11,7 +11,7 @@</span></span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="diff"> </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="diff"> export CLASSPATH="";</span>
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<a href="https://salsa.debian.org/med-team/emboss/-/commit/b6513f67155365345bb22b9b195ee0b140b1d804#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,3 +7,4 @@ plplotP-correct-padding.patch</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">remove_non-free_doc.patch</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">path_max.patch</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">no_makejar.patch</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">com_sun_net_deprecation.patch</span></pre>
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