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<h3>
Pierre Gruet pushed to branch master
at <a href="https://salsa.debian.org/med-team/megan-ce">Debian Med / megan-ce</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/68eeda605d1a664946ae9956ebaa41beb2f52897">68eeda60</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T21:51:03+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Watching the tags page of Github
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/c9faec93363ba0ddd789a665d0d592171c75f258">c9faec93</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T21:51:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 6.21.1+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/e13b8704d11575ed0e9fb368fa2e5e93b10c0ade">e13b8704</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T21:53:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/6.21.1+dfsg'

Update to upstream version '6.21.1+dfsg'
with Debian dir 38677ef463466c191607a89b10e33f00daf50ed4</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/db633c2dc2a84056b84a06696f72a0ee45e662ad">db633c2d</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:00:19+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refreshing d/copyright
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/1080d11e2d92247e04cc27709961f034418045a4">1080d11e</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:01:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Removing embedded code copy of malt
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/6666f057b9b954cb03cedface89928ad896d7fac">6666f057</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:02:27+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Removing d/get-orig-source
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/6c701ada7f9ea6f9e3ec35cee5ec98cc76cb1fa0">6c701ada</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:03:11+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Depending on debhelper-compat 13
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/c929b2f21bf863936195730696a2deac99383873">c929b2f2</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:03:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Rules-Requires-Root: no
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/megan-ce/-/commit/b5c8405fca8d586dbad7e8f386d37a981d1a5d23">b5c8405f</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2021-12-25T22:17:55+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refreshing patches
</pre>
</li>
</ul>
<h4>20 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#5dd8576b7403903c3367d19b433c9875aacb51ac">
<span class="new-file">
+
Bugs-Java12.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#557cb9462ec8cf34a2ae73c76311ddcf81ec9888">
antbuild/build.xml
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">

debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#fc932f0eaa389a4e2b93916f3995aae4019ea823">
<span class="deleted-file">

debian/get-orig-source
</span>
</a>
</li>
<li class="file-stats">
<a href="#636f18a917e73720b009dcbd68c321227e7f6c64">
<span class="deleted-file">

debian/malt/AlignmentEngine.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#2777a6558cbe0cef2008fe194959ba1f2c3dff12">
<span class="deleted-file">

debian/malt/DataForInnerLoop.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#2daed0b9bb9fb32fd2e4eb135f8fe4883345510d">
<span class="deleted-file">

debian/malt/ITextProducer.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#cf99827354450bedd66640100ff2461cd9d7e438">
<span class="deleted-file">

debian/malt/MaltBuild.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#d5a2c0ff261deacf8a78646f0c5a3889c8b0595f">
<span class="deleted-file">

debian/malt/MaltOptions.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#1cf78b66a485d5dca1cbd2d0a54a25c214856cb1">
<span class="deleted-file">

debian/malt/MaltRun.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#8e2fb66751068fbb67d1afccc9795a9349cf0ff9">
<span class="deleted-file">

debian/malt/Notes
</span>
</a>
</li>
<li class="file-stats">
<a href="#2dfe643cffea3bcd8f640898a65e2a3284131c42">
<span class="deleted-file">

debian/malt/TestIO.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#c9261d43fe128f79711c5ffabf5526b03a7abf2e">
<span class="deleted-file">

debian/malt/Version.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#cfbf43cead33d6b2340e186b0ef24fc9c7c8ec1b">
<span class="deleted-file">

debian/malt/align/BlastStatisticsHelper.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#e0899d7ce77b7aa1606faeea07801481bb77ec96">
<span class="deleted-file">

debian/malt/align/DNAScoringMatrix.java
</span>
</a>
</li>
<li class="file-stats">
<a href="#3acc6fb284835b4e2476acfec8ba97bdf46af405">
<span class="deleted-file">

debian/malt/align/IScoringMatrix.java
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

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<a href="https://salsa.debian.org/med-team/megan-ce/-/compare/426d29fc2cdf89a577d97115f323f1618bc4eaab...b5c8405fca8d586dbad7e8f386d37a981d1a5d23">View it on GitLab</a>.
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