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<h3>
Rebecca N. Palmer pushed to branch master
at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/89e5483eb62eca620af09a7005caa8bbdd2ee9a6">89e5483e</a></strong>
<div>
<span>by Nilesh Patra</span>
<i>at 2021-11-10T01:03:44+05:30</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 6.10.0+dfsg1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/f5e50c2ae035171ab05c5656e079c0038788aacb">f5e50c2a</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2022-01-08T19:34:09+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove unnecessary repack.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/48c2b38f41b49c57434abddedf474edbdcb3aa6d">48c2b38f</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2022-01-08T19:36:27+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 6.12.3</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/27cd42dd44376ec328c4364071ef2dce13649e45">27cd42dd</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2022-01-08T19:36:47+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/6.12.3'
Update to upstream version '6.12.3'
with Debian dir 262f173a96836ef4fb5622f5bef14a2748a3080d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/1ed24a46d01c841c495951e7f7edebe6a8fb9591">1ed24a46</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2022-01-08T19:43:07+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/-/commit/f115a157ed922d936e014909173055421421b5cc">f115a157</a></strong>
<div>
<span>by Rebecca N. Palmer</span>
<i>at 2022-01-08T20:23:24+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update d/copyright,
Use python3-connection-pool instead of an embedded copy,
Remove unsatisfiable Suggests,
Update and sort build/test-Depends.
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#fcc8b73a70c3f6bccb6382487e59d0069f657074">
.github/workflows/conventional-prs.yml
</a>
</li>
<li class="file-stats">
<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">
.github/workflows/main.yml
</a>
</li>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#60a7101d6e800be81c1cf21ec8952775f996472a">
<span class="deleted-file">
−
debian/connection_pool.py
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#6cbb5336bfa272ad2629f5ab1fabba4240e2114e">
debian/patches/0008-remove_sphinx.ext.patch
</a>
</li>
<li class="file-stats">
<a href="#28b0709ae4054bc48d823b79dcfc13f75eccbb7e">
debian/patches/fix_test_pytest.patch
</a>
</li>
<li class="file-stats">
<a href="#5ac7dfcad80b7453ae632a07fb163e096a38582f">
<span class="deleted-file">
−
debian/patches/hack-around-connectionpool.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#3a60a3d8ad77c5d7b9f50f6d9e07887ec385a803">
debian/patches/local_javascript.patch
</a>
</li>
<li class="file-stats">
<a href="#c95b49fcdcf94cb632aec008933196e57cb26c3c">
debian/patches/python2to3.patch
</a>
</li>
<li class="file-stats">
<a href="#e246f69e945a7c2e9a8e25cfacfcac7714c92b69">
debian/patches/python3.patch
</a>
</li>
<li class="file-stats">
<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
debian/patches/reproducible-build.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#260fb267aa59c740952b443e87e306a192a8d82e">
debian/patches/workaround_sphinx_issue.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#83223a554d33ba7e1888274ff8ac43adb8147ba0">
debian/tests/control
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#254a2da7a740675e537439eb88e32083b9ea4771">
docs/conf.py
</a>
</li>
<li class="file-stats">
<a href="#271b54d579b58b0097c7c56b8ab060c6e3a67b4f">
docs/requirements.txt
</a>
</li>
<li class="file-stats">
<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
</a>
</li>
<li class="file-stats">
<a href="#a64f4e86841a3aed0cd5f5ec9d71431086ea0014">
docs/tutorial/advanced.rst
</a>
</li>
<li class="file-stats">
<a href="#cf170f1aad8eab1ea8f50709422e4eae4ebaf604">
docs/tutorial/short.rst
</a>
</li>
<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
</a>
</li>
<li class="file-stats">
<a href="#a3f7d8116d97086f34b95ab949c6c99128c6713f">
snakemake/benchmark.py
</a>
</li>
<li class="file-stats">
<a href="#959b717a57676faf331e51a5fe763a00dea0032d">
snakemake/common/__init__.py
</a>
</li>
<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
</a>
</li>
<li class="file-stats">
<a href="#2eefc56ce2f64fa1b7c1a3a535061a326d1703e8">
snakemake/deployment/containerize.py
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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