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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/snap-aligner">Debian Med / snap-aligner</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/c4495e9cfe16b1ecfce34d4432995aff6c0591cd">c4495e9c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T15:55:54+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use tags instead of releases
- Add filenamemangle option
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/777085bcbe85413377c59bf7cda1307da88c2bdf">777085bc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:07:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/8b8aee110467b3ea007008f465fc73a6b2b04566">8b8aee11</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:07:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/b03e7ad8372783801be335b793b21e943dc1f3b2">b03e7ad8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:07:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.0.0+dfsg'
Update to upstream version '2.0.0+dfsg'
with Debian dir 89abce58787caa50a22bfd1d2ddc3263fdc32ecd</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/621412dbfb1d8897afd3af3730f753ef21a97e0c">621412db</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:07:52+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add missing build dependency on dh addon.
Changes-By: lintian-brush
Fixes: lintian: missing-build-dependency-for-dh_-command
See-also: https://lintian.debian.org/tags/missing-build-dependency-for-dh_-command.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/a0648ae26ed2fa8ed757d31c31fb6a4945fd4695">a0648ae2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:09:57+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches to new upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snap-aligner/-/commit/31b279fb326cd6eeeb79014670e5b7093e25b9c7">31b279fb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-21T16:17:17+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Cleanup autopkgtest from debug lines and boilerplate comment
</pre>
</li>
</ul>
<h4>11 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#a21d09451061c96791124a9bc81371fe83e43559">
SNAPLib/AffineGapVectorized.cpp
</a>
</li>
<li class="file-stats">
<a href="#dc201fac0bbd34776ec4fabea6d736a3eb8e26e8">
SNAPLib/AffineGapVectorized.h
</a>
</li>
<li class="file-stats">
<a href="#66a42352e8acb461590c39ff797ea59cc42451f9">
SNAPLib/AlignerContext.cpp
</a>
</li>
<li class="file-stats">
<a href="#aa56031008802c2b265498e6eef1b0f5e6fe0790">
SNAPLib/AlignerContext.h
</a>
</li>
<li class="file-stats">
<a href="#9bb9aff30d7c007202b16f3986195f3ed2e82c3e">
SNAPLib/AlignerOptions.cpp
</a>
</li>
<li class="file-stats">
<a href="#440590fee9dabb413f903741acac331b91ca7314">
SNAPLib/AlignerOptions.h
</a>
</li>
<li class="file-stats">
<a href="#4d3d052f1ccc6c148a030deb92acb6a59002a8b0">
SNAPLib/AlignmentResult.h
</a>
</li>
<li class="file-stats">
<a href="#23b1be5ba07cacc7a3ccdaec604b4fd46f234ec6">
SNAPLib/Bam.cpp
</a>
</li>
<li class="file-stats">
<a href="#9a7a577f2262f2296c4f5c94f93d367733f06055">
SNAPLib/Bam.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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