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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/librostlab-blast">Debian Med / librostlab-blast</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/librostlab-blast/-/commit/14f045514a9c43983d12e6d7739cf6b471b3b16b">14f04551</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-23T08:32:15+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Do not force c++03
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librostlab-blast/-/commit/4290ffc43269eaffef026065381282c92603c55f">4290ffc4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-23T08:36:10+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Drop unused lintian overrides
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/librostlab-blast/-/commit/7b5377329daee1201efbf08521b0957664395a4a">7b537732</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2022-01-23T08:39:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Rename autopkgtest to run-unit-test
</pre>
</li>
</ul>
<h4>9 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6a99a1e522a0f5ca122fd9818a9d8536ea59942">
debian/README.test
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#02713f69398f0b2fba44df720c99f92c9fc16d5c">
debian/librostlab-blast-doc.docs
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</li>
<li class="file-stats">
<a href="#1c60cdd2b7e770d7a1ee5a498d6e13776c334e2b">
<span class="deleted-file">
−
debian/librostlab-blast-doc.lintian-overrides
</span>
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</li>
<li class="file-stats">
<a href="#064c3bb4bb24081910668e5aeaf375449037e7b3">
debian/librostlab-blast0-dev.docs
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<li class="file-stats">
<a href="#58e32f057202f2efc21bf5c2580568255df8d8c7">
<span class="deleted-file">
−
debian/librostlab-blast0v5-dbg.lintian-overrides
</span>
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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</li>
<li class="file-stats">
<a href="#83223a554d33ba7e1888274ff8ac43adb8147ba0">
debian/tests/control
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</li>
<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/installation-test
→
debian/tests/run-unit-test
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6a99a1e522a0f5ca122fd9818a9d8536ea59942">
<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#f6a99a1e522a0f5ca122fd9818a9d8536ea59942"><strong>debian/README.test</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -3,7 +3,7 @@ Notes on how this package can be tested.</td>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC3" class="line" lang="php"></span>
</pre>
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<td class="old_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="new_line diff-line-num" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="php"><span class="nc" style="color: #458; font-weight: 600;">This</span> <span class="n" style="color: #333;">package</span> <span class="n" style="color: #333;">can</span> <span class="n" style="color: #333;">be</span> <span class="n" style="color: #333;">tested</span> <span class="n" style="color: #333;">by</span> <span class="n" style="color: #333;">executing</span></span>
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<td class="new_line diff-line-num" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC5" class="line" lang="php"></span>
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<td class="new_line diff-line-num old" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="php"> <span class="n" style="color: #333;">sh</span> <span class="n" style="color: #333;"><span class="idiff left right">installation</span></span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">test</span></span>
</pre>
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<td class="old_line diff-line-num new" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="new_line diff-line-num new" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC6" class="line" lang="php"> <span class="n" style="color: #333;">sh</span> <span class="n" style="color: #333;"><span class="idiff left">run</span></span><span class="o" style="font-weight: 600;"><span class="idiff">-</span></span><span class="n" style="color: #333;"><span class="idiff right">unit</span></span><span class="o" style="font-weight: 600;">-</span><span class="n" style="color: #333;">test</span></span>
</pre>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC7" class="line" lang="php"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="php"><span class="n" style="color: #333;">in</span> <span class="n" style="color: #333;">order</span> <span class="n" style="color: #333;">to</span> <span class="n" style="color: #333;">confirm</span> <span class="n" style="color: #333;">its</span> <span class="n" style="color: #333;">integrity</span><span class="mf" style="color: #099;">.</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="php"></span>
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<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">librostlab-blast (1.0.1-12) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> [ Aaron M. Ucko]</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Aaron M. Ucko<span class="idiff left right"> </span>]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * eliminate the need to force an old C++ standard version</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Closes: #851472, #832138</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> * Drop unused lintian overrides</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Rename autopkgtest to run-unit-test</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Sun, 23 Jan 2022 08:13:21 +0100</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">librostlab-blast (1.0.1-11) unstable; urgency=medium</span>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#02713f69398f0b2fba44df720c99f92c9fc16d5c"><strong>debian/librostlab-blast-doc.docs</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">doxygen-doc/html/</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"># doxygen-doc/librostlab-blast.pdf</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">lib/librostlab-blast.tag</span></pre>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#1c60cdd2b7e770d7a1ee5a498d6e13776c334e2b"><strong>debian/librostlab-blast-doc.lintian-overrides</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"># Laszlo Kajan <lkajan@rostlab.org>:</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"># This jquery.js is copied into the html documentation by the doxygen</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"># version currently in unstable (1.7.6.1). Earlier versions of Doxygen</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"># (e.g. i n stable) do not copy a jquery.js there. The jquery.js copied</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"># by doxygen is much earlier (1.3.2) than the current version in unstable</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"># (1.7.2-1). The jquery.js from doxygen actually is a minified bundle of</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"># several things:</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"># * jQuery JavaScript Library v1.3.2 http://jquery.com/</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"># * Sizzle CSS Selector Engine - v0.9.3 http://sizzlejs.com/</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"># * jQuery hashchange event - v1.3 - 7/21/2010</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"># http://benalman.com/projects/jquery-hashchange-plugin/</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"># * jQuery UI 1.7.2 http://docs.jquery.com/UI</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"># * jQuery UI Resizable 1.7.2 http://docs.jquery.com/UI/Resizables</span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"># * jQuery.ScrollTo - Easy element scrolling using jQuery.</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext">#</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"># Out of these Sizzle is not packaged for Debian, neither is the hashchange</span>
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<td class="old_line diff-line-num old" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"># event or jQuery.ScrollTo, as far as I can tell.</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"># </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"># Therefore, it is necessary to keep this jquery.js instead of linking to the</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"># file with the same name from libjs-jquery.</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext">librostlab-blast-doc: embedded-javascript-library usr/share/doc/librostlab-blast-doc/html/jquery.js</span></pre>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#064c3bb4bb24081910668e5aeaf375449037e7b3"><strong>debian/librostlab-blast0-dev.docs</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">debian/README.test</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">debian/tests/<span class="idiff left right">installation</span>-test</span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">debian/tests/<span class="idiff left right">run-unit</span>-test</span></pre>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#58e32f057202f2efc21bf5c2580568255df8d8c7"><strong>debian/librostlab-blast0v5-dbg.lintian-overrides</strong>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext"># G++5 ABI transition</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">librostlab-blast0v5-dbg: package-name-doesnt-match-sonames librostlab-blast0-dbg</span></pre>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,9 +2,6 @@</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"># Uncomment this to turn on verbose mode.</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">#export DH_VERBOSE=1</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"># force pre c++11 because of #811992 respective #829604</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext">export DEB_CXXFLAGS_MAINT_APPEND = -std=c++03</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">export DEB_BUILD_MAINT_OPTIONS = hardening=+all</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">%:</span>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#83223a554d33ba7e1888274ff8ac43adb8147ba0"><strong>debian/tests/control</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Tests: <span class="idiff left right">installation</span>-test</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Tests: <span class="idiff left right">run-unit</span>-test</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Depends: @, build-essential</span></pre>
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<a href="https://salsa.debian.org/med-team/librostlab-blast/-/compare/706fabe362a9a645b749d3841d7fbbed7876b001...7b5377329daee1201efbf08521b0957664395a4a#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/installation-test</strong>
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