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<h3>
Pierre Gruet pushed to branch master
at <a href="https://salsa.debian.org/med-team/snpeff">Debian Med / snpeff</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/44477ade8f587ac3264230aab87fe95db13c21a3">44477ade</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-23T15:18:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Using tags instead of releases in d/watch
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/5560aa4ed834b23d2f9fde6cef14328b15f7db06">5560aa4e</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-23T15:19:03+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Preparing to repack for next upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/de2848b6e46ea20e686065b66d77a489a02db9db">de2848b6</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-23T15:19:25+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.1+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/225042a61b4da30859f50edc4f6a0f7b191174fa">225042a6</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-23T15:21:45+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.1+dfsg'
Update to upstream version '5.1+dfsg'
with Debian dir 175a1d358c5ef274b3594eec0ce8996514008181</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/753828c279f9760da38335cbbe2454c9c70b75e5">753828c2</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:03:16+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Updating dependencies list and related Maven rules, notably switching to junit5
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/c0c63c700b1755a50cded573763961a457944a25">c0c63c70</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:04:08+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">The path of the config file in the source has moved
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/927014f29a65229ad1e8bf1674025e0fd1bb1989">927014f2</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:05:31+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Now the version number is properly filed in pom.xml
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/0666c5ba2411f0414bc8d85505a702efe24782ef">0666c5ba</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:07:18+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Removing now useless patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/f9dfd2ce56d13e7bd8e710d1bc4d20723a983b37">f9dfd2ce</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:08:51+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Simplifying patch to modify the pom with the lowercase artifactId
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/83bc8e73d158c4d140d8c51fdb75890df4c5aaa0">83bc8e73</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T08:10:43+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refreshing patch for the launching script and config file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/af35b2a3cffbb37239e0533fa574f8c86f5c3d6b">af35b2a3</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:04:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Using Debian-packaged biojava4 instead of biojava6, previously upstream used biojava3
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/72c6f2c6db00403f8f94e81c6ed65a28f0aa40a6">72c6f2c6</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:08:47+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Moving the test classes under src/test and running unit tests only
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/d9c4e58405d982cd6e063f511198d67e6bae13ad">d9c4e584</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:09:08+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Disabling tests needing files that are not available
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/07168482acf06baf425b8c09d3b2467c89c2a187">07168482</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:09:59+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Marking the doc package as Multi-Arch: foreign
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/fab32cc82265c49f18b0a54099d677e5a0d8e01d">fab32cc8</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:11:34+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Updating changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/9f0be6b604e6be3d2293f21dfe5b49b8447bd16c">9f0be6b6</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T14:20:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refreshing d/copyright
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snpeff/-/commit/8a6e5f9df6dcd3a9662b1c52c18ed6dac838599d">8a6e5f9d</a></strong>
<div>
<span>by Pierre Gruet</span>
<i>at 2022-01-29T15:15:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adding a Lintian override for a file with very-long-lines
</pre>
</li>
</ul>
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